E-GEOD-1541 - Transcription profiling of human A549 cell line activated with either cyclic stretch (20% elongation), tumor necrosis factor or lipopolysaccharide

Status
Submitted on 4 July 2004, released on 4 August 2007, last updated on 27 March 2012
Organism
Homo sapiens
Samples (20)
Array (1)
Protocols (3)
Description
Alveolar epithalial cells (A549) were used as a model of pulmonary parenchymal cell activation to quiery gene expression profile of activation with either cyclic stretch (20% elongation), TNF (20 ng/ml), LPS (1 mcg/ml) or TNF+STRETCH at both 1 and 4 hrs.
Experiment types
transcription profiling by array, co-expression, compound treatment, stimulus or stress
Contact
Citation
DNA microarray analysis of gene expression in alveolar epithelial cells in response to TNFalpha, LPS, and cyclic stretch. C C dos Santos, B Han, C F Andrade, X Bai, S Uhlig, R Hubmayr, M Tsang, M Lodyga, S Keshavjee, A S Slutsky, M Liu. Physiol Genomics 19(3):331-42 (2004)
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-1541.idf.txt
Sample and data relationshipE-GEOD-1541.sdrf.txt
Raw data (1)E-GEOD-1541.raw.1.zip
Processed data (1)E-GEOD-1541.processed.1.zip
Array designA-AFFY-41.adf.txt
R ExpressionSetE-GEOD-1541.eSet.r
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