E-GEOD-13975 - Transcription profiling by array of human fetal mesenchymal stem cell labelled with ferucarbotran or MGIO

Status
Released on 8 February 2009, last updated on 29 April 2015
Organism
Homo sapiens
Samples (9)
Array (1)
Protocols (6)
Description
Cell tracking is enabled by incubating ex vivo cells with commercially/clinically available MRI particulate label, such as ferucarbotran. However, the uptake by non-phagocytic cells, such as mesenchymal stem cell (MSC) is poor, and the detection by MRI is impeded. MGIO is a new label that is efficiently taken up by MSC. The proliferation and differentiation capacity of labelled cells are usually assessed to determine cytotoxicity. In this study, we compared the global gene expression profiles of mock-labelled, ferucarbotran-labelled and MGIO-labelled fetal MSC. Experiment Overall Design: Fetal MSC were labelled at passage 5, washed with PBS to remove excess labels, detached by trypsin, pelleted by centrfugation and lysed for RNA extraction with the RNeasy mini kit (Qiagen) in triplicates.
Experiment types
transcription profiling by array, compound treatment design
Contact
Citation
Microgel iron oxide nanoparticles for tracking human fetal mesenchymal stem cells through magnetic resonance imaging. Lee ES, Chan J, Shuter B, Tan LG, Chong MS, Ramachandra DL, Dawe GS, Ding J, Teoh SH, Beuf O, Briguet A, Tam KC, Choolani M, Wang SC.
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-13975.idf.txt
Sample and data relationshipE-GEOD-13975.sdrf.txt
Raw data (1)E-GEOD-13975.raw.1.zip
Processed data (1)E-GEOD-13975.processed.1.zip
Array designA-AFFY-44.adf.txt
Links