E-GEOD-12535 - The expression profiles analysis of a virulence plasmid-cured strain of shigella flexneri

Status
Submitted on 23 August 2008, released on 15 May 2010, last updated on 10 June 2011
Organism
Shigella flexneri
Samples (4)
Array (1)
Protocols (14)
Description
In this study, we analyzed the expression profiles of a virulence plasmid-cured strain and wild-type strain of shigella flexneri. The results showed that the genes of glp regulon were upregulated in mutant bacteria in stationary phase cultures. The two strains were cultured in LB broth into log-phase and stationary phase respectively. Then, the total RNAs were extracted and analyzed by Nimblegen biochips.
Experiment type
transcription profiling by array 
Contacts
Li Zhu <jewly54@126.com>, Hengliang Wang
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-12535.idf.txt
Sample and data relationshipE-GEOD-12535.sdrf.txt
Raw data (1)E-GEOD-12535.raw.1.zip
Processed data (1)E-GEOD-12535.processed.1.zip
Array designA-GEOD-7185.adf.txt
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