E-GEOD-12314 - Transcription profiling of Transgenic Soybean Cotyledons

Status
Submitted on 31 July 2008, released on 13 November 2008, last updated on 3 May 2014
Organism
Glycine max
Samples (6)
Array (1)
Protocols (5)
Description
Suppression of both endogenous storage proteins in soybean cotyledons was accomplished by RNAi. Microarray analysis was used to compare 3 samples, 1 nontransgenic control, 2 transgenic biological replicates. Experiment Overall Design: 3 samples. Each sample had 2 technical replicates. Experiment Overall Design: 1. Control, nontransgenic Experiment Overall Design: 2. RNAi transgenic for storage protein suppression Experiment Overall Design: 3. Second RNAi transgenic for storage protein suppression, independent line from the first sample
Experiment types
transcription profiling by array, unknown experiment type
Contact
monica schmidt
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-12314.idf.txt
Sample and data relationshipE-GEOD-12314.sdrf.txt
Raw data (1)E-GEOD-12314.raw.1.zip
Processed data (1)E-GEOD-12314.processed.1.zip
Array designA-AFFY-59.adf.txt
R ExpressionSetE-GEOD-12314.eSet.r
Links