Source Name	Characteristics[Organism]	Characteristics[NASC:Growth Stage]	Characteristics[GeneticModification]	Characteristics[Ecotype]	Characteristics[StrainOrLine]	Characteristics[NASC:StockCode]	Characteristics[Genotype]	Material Type	Protocol REF	Parameter Value[Light]	Parameter Value[Medium]	Parameter Value[Temperature]	Parameter Value[Treatment]	Parameter Value[Water]	Parameter Value[Nutrient]	Parameter Value[Location]	Sample Name	Characteristics[OrganismPart]	Material Type	Protocol REF	Sample Name	Material Type	Protocol REF	Labeled Extract Name	Label	Material Type	Protocol REF	Parameter Value[Wash A1 Recovery Mixes]	Parameter Value[Wash A1 Temperature (C)]	Parameter Value[Number of Wash A1 Cycles]	Parameter Value[Mixes per Wash A1 Cycle]	Parameter Value[Wash B Recovery Mixes]	Parameter Value[Wash B Temperature (C)]	Parameter Value[Number of Wash B Cycles]	Parameter Value[Mixes per Wash B Cycle]	Parameter Value[Stain Temperature (C)]	Parameter Value[First Stain Time (seconds)]	Parameter Value[Wash A2 Recovery Mixes]	Parameter Value[Wash A2 Temperature (C)]	Parameter Value[Number of Wash A2 Cycles]	Parameter Value[Mixes per Wash A2 Cycle]	Parameter Value[Second Stain Time (seconds)]	Parameter Value[Third Stain Time (seconds)]	Parameter Value[Wash A3 Recovery Mixes]	Parameter Value[Wash A3 Temperature (C)]	Parameter Value[Number of Wash A3 Cycles]	Parameter Value[Mixes per Wash A3 Cycle]	Parameter Value[Holding Temperature (C)]	Hybridization Name	Array Design REF	Protocol REF	Parameter Value[Pixel Size]	Parameter Value[Number of Scans]	Protocol REF	Parameter Value[Algorithm name]	Parameter Value[Upper left corner x coordinate]	Parameter Value[Upper left corner y coordinate]	Parameter Value[Upper right corner x coordinate]	Parameter Value[Upper right corner y coordinate]	Parameter Value[Lower right corner x coordinate]	Parameter Value[Lower right corner y coordinate]	Parameter Value[Lower left corner x coordinate]	Parameter Value[Lower left corner y coordinate]	Parameter Value[Percentile]	Parameter Value[Cell margin]	Parameter Value[Outlier high]	Parameter Value[Outlier low]	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Parameter Value[Algorithm name]	Parameter Value[Algorithm version]	Parameter Value[Alpha1]	Parameter Value[Alpha2]	Parameter Value[Tau]	Parameter Value[Gamma1H]	Parameter Value[Gamma1L]	Parameter Value[Gamma2H]	Parameter Value[Gamma2L]	Parameter Value[Perturbation]	Parameter Value[Normalization factor]	Parameter Value[Scale factor]	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	Factor Value[Genotype]
NASCBioSource:197	Arabidopsis thaliana	3.9	induced_mutation	Col-0	PR1-luc	Not in stock centre	cir1:ein2	whole_organism	P-MTAB-24115	24 hour light	250 parts peat, 250 parts vermiculite, 1 part lime	21-22 C	Intercept insecticide 0.2g/l in water	Twice weekly	1 part 2:3:2 fertilizer	Glasshouse	NASCBioSampleA:197	Rosette Leaves	organism_part	P-MTAB-24111	NASCExtract:33	RNA	NASCLabelProtocol:1	NASCLabeledExtract:33	biotin	RNA	Affymetrix:Protocol:Hybridization-EukGE-WS2v4	0	25	10	2	0	50	4	15	25	600	0	25	10	4	600	600	0	30	15	4	25	Affymetrix:PhysicalBioAssay:SHM001_AG_A2_ce2	A-AFFY-2	Affymetrix:Protocol:Scan	3	2	Affymetrix:Protocol:Percentile	Percentile	234	233	4496	238	4491	4503	230	4499	75	2	1.5	1.004	CELSHM001_AG_A2_ce2_SHM001_AG_A2_ce2_CEL_externaldata.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-7/E-NASC-7.raw.1.zip	Affymetrix:Protocol:ExpressionStat	ExpressionStat	5	0.04	0.06	0.015	0.0025	0.0025	0.003	0.003	1.1	1	0.606939	CHPSHM001_AG_A2_ce2_SHM001_AG_A2_ce2_CHP_externaldata.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-7/E-NASC-7.processed.1.zip	cir1:ein2
NASCBioSource:2	Arabidopsis thaliana	3.9	gene_knock_in	Col-0	PR1-luc	N1092	wild type	whole_organism	P-MTAB-24112	24 hour light	250 parts peat, 250 parts vermiculite, 1 part lime	21-22 C	Intercept insecticide 0.2g/l in water	Twice weekly	1 part 2:3:2 fertilizer	Glasshouse	NASCBioSampleA:2	Rosette Leaves	organism_part	P-MTAB-24111	NASCExtract:2	RNA	NASCLabelProtocol:1	NASCLabeledExtract:2	biotin	RNA	Affymetrix:Protocol:Hybridization-EukGE-WS2v4	0	25	10	2	0	50	4	15	25	600	0	25	10	4	600	600	0	30	15	4	25	Affymetrix:PhysicalBioAssay:SHM001_AG_A4_luc	A-AFFY-2	Affymetrix:Protocol:Scan	3	2	Affymetrix:Protocol:Percentile	Percentile	233	234	4495	250	4480	4515	218	4500	75	2	1.5	1.004	CELSHM001_AG_A4_luc_SHM001_AG_A4_luc_CEL_externaldata.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-7/E-NASC-7.raw.1.zip	Affymetrix:Protocol:ExpressionStat	ExpressionStat	5	0.04	0.06	0.015	0.0025	0.0025	0.003	0.003	1.1	1	0.557391	CHPSHM001_AG_A4_luc_SHM001_AG_A4_luc_CHP_externaldata.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-7/E-NASC-7.processed.1.zip	wild type
NASCBioSource:255	Arabidopsis thaliana	3.9	gene_knock_in	Col-0	PR1-luc	N1092	wild type	whole_organism	P-MTAB-24116	24 hour light	250 parts peat, 250 parts vermiculite, 1 part lime	21-22 C	Intercept insecticide 0.2g/l in water	Twice weekly	1 part 2:3:2 fertilizer	Glasshouse	NASCBioSampleA:255	Rosette Leaves	organism_part	P-MTAB-24111	NASCExtract:256	RNA	NASCLabelProtocol:1	NASCLabeledExtract:256	biotin	RNA	Affymetrix:Protocol:Hybridization-EukGE-WS2v4	0	25	10	2	0	50	4	15	25	600	0	25	10	4	600	600	0	30	15	4	25	Affymetrix:PhysicalBioAssay:SHM002_ATH1_A4-Murra-luc	A-AFFY-2	Affymetrix:Protocol:Scan	3	2	Affymetrix:Protocol:Percentile	Percentile	229	232	4500	271	4462	4541	191	4502	75	2	1.5	1.004	CELSHM002_ATH1_A4-Murra-luc_SHM002_ATH1_A4-Murra-luc_CEL_externaldata.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-7/E-NASC-7.raw.1.zip	Affymetrix:Protocol:ExpressionStat	ExpressionStat	5	0.04	0.06	0.015	0.0025	0.0025	0.003	0.003	1.1	1	1.410257	CHPSHM002_ATH1_A4-Murra-luc_SHM002_ATH1_A4-Murra-luc_CHP_externaldata.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-7/E-NASC-7.processed.1.zip	wild type
NASCBioSource:256	Arabidopsis thaliana	3.9	induced_mutation	Col-0	PR1-luc	Not in stock centre	cir1	whole_organism	P-MTAB-24117	24 hour light	250 parts peat, 250 parts vermiculite, 1 part lime	21-22 C	Intercept insecticide 0.2g/l in water	Twice weekly	1 part 2:3:2 fertilizer	Glasshouse	NASCBioSampleA:256	Rosette Leaves	organism_part	P-MTAB-24111	NASCExtract:257	RNA	NASCLabelProtocol:1	NASCLabeledExtract:257	biotin	RNA	Affymetrix:Protocol:Hybridization-EukGE-WS2v4	0	25	10	2	0	50	4	15	25	600	0	25	10	4	600	600	0	30	15	4	25	Affymetrix:PhysicalBioAssay:SHM002_ATH1_A1-Murra-cr1	A-AFFY-2	Affymetrix:Protocol:Scan	3	2	Affymetrix:Protocol:Percentile	Percentile	229	234	4499	277	4458	4547	187	4504	75	2	1.5	1.004	CELSHM002_ATH1_A1-Murra-cr1_SHM002_ATH1_A1-Murra-cr1_CEL_externaldata.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-7/E-NASC-7.raw.1.zip	Affymetrix:Protocol:ExpressionStat	ExpressionStat	5	0.04	0.06	0.015	0.0025	0.0025	0.003	0.003	1.1	1	1.64201	CHPSHM002_ATH1_A1-Murra-cr1_SHM002_ATH1_A1-Murra-cr1_CHP_externaldata.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-7/E-NASC-7.processed.1.zip	cir1
NASCBioSource:257	Arabidopsis thaliana	3.9	induced_mutation	Col-0	PR1-luc	Not in stock centre	ein2	whole_organism	P-MTAB-24118	24 hour light	250 parts peat, 250 parts vermiculite, 1 part lime	21-22 C	Intercept insecticide 0.2g/l in water	Twice weekly	1 part 2:3:2 fertilizer	Glasshouse	NASCBioSampleA:257	Rosette Leaves	organism_part	P-MTAB-24111	NASCExtract:258	RNA	NASCLabelProtocol:1	NASCLabeledExtract:258	biotin	RNA	Affymetrix:Protocol:Hybridization-EukGE-WS2v4	0	25	10	2	0	50	4	15	25	600	0	25	10	4	600	600	0	30	15	4	25	Affymetrix:PhysicalBioAssay:SHM002_ATH1_A2-Murra-ce2	A-AFFY-2	Affymetrix:Protocol:Scan	3	2	Affymetrix:Protocol:Percentile	Percentile	233	229	4504	212	4523	4482	252	4500	75	2	1.5	1.004	CELSHM002_ATH1_A2-Murra-ce2_SHM002_ATH1_A2-Murra-ce2_CEL_externaldata.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-7/E-NASC-7.raw.1.zip	Affymetrix:Protocol:ExpressionStat	ExpressionStat	5	0.04	0.06	0.015	0.0025	0.0025	0.003	0.003	1.1	1	1.57278	CHPSHM002_ATH1_A2-Murra-ce2_SHM002_ATH1_A2-Murra-ce2_CHP_externaldata.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-7/E-NASC-7.processed.1.zip	ein2
NASCBioSource:258	Arabidopsis thaliana	3.9	induced_mutation	Col-0	PR1-luc	Not in stock centre	cir1:ein2	whole_organism	P-MTAB-24119	24 hour light	250 parts peat, 250 parts vermiculite, 1 part lime	21-22 C	Intercept insecticide 0.2g/l in water	Twice weekly	1 part 2:3:2 fertilizer	Glasshouse	NASCBioSampleA:258	Rosette Leaves	organism_part	P-MTAB-24111	NASCExtract:259	RNA	NASCLabelProtocol:1	NASCLabeledExtract:259	biotin	RNA	Affymetrix:Protocol:Hybridization-EukGE-WS2v4	0	25	10	2	0	50	4	15	25	600	0	25	10	4	600	600	0	30	15	4	25	Affymetrix:PhysicalBioAssay:SHM002_ATH1_A3-Murra-en2	A-AFFY-2	Affymetrix:Protocol:Scan	3	2	Affymetrix:Protocol:Percentile	Percentile	229	234	4500	287	4449	4557	178	4504	75	2	1.5	1.004	CELSHM002_ATH1_A3-Murra-en2_SHM002_ATH1_A3-Murra-en2_CEL_externaldata.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-7/E-NASC-7.raw.1.zip	Affymetrix:Protocol:ExpressionStat	ExpressionStat	5	0.04	0.06	0.015	0.0025	0.0025	0.003	0.003	1.1	1	2.132927	CHPSHM002_ATH1_A3-Murra-en2_SHM002_ATH1_A3-Murra-en2_CHP_externaldata.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-7/E-NASC-7.processed.1.zip	cir1:ein2
NASCBioSource:36	Arabidopsis thaliana	3.9	induced_mutation	Col-0	PR1-luc	Not in stock centre	cir1	whole_organism	P-MTAB-24113	24 hour light	250 parts peat, 250 parts vermiculite, 1 part lime	21-22 C	Intercept insecticide 0.2g/l in water	Twice weekly	1 part 2:3:2 fertilizer	Glasshouse	NASCBioSampleA:36	Rosette Leaves	organism_part	P-MTAB-24111	NASCExtract:32	RNA	NASCLabelProtocol:1	NASCLabeledExtract:32	biotin	RNA	Affymetrix:Protocol:Hybridization-EukGE-WS2v4	0	25	10	2	0	50	4	15	25	600	0	25	10	4	600	600	0	30	15	4	25	Affymetrix:PhysicalBioAssay:SHM001_AG_A1_cr1	A-AFFY-2	Affymetrix:Protocol:Scan	3	2	Affymetrix:Protocol:Percentile	Percentile	235	233	4497	225	4506	4490	244	4498	75	2	1.5	1.004	CELSHM001_AG_A1_cr1_SHM001_AG_A1_cr1_CEL_externaldata.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-7/E-NASC-7.raw.1.zip	Affymetrix:Protocol:ExpressionStat	ExpressionStat	5	0.04	0.06	0.015	0.0025	0.0025	0.003	0.003	1.1	1	0.46696	CHPSHM001_AG_A1_cr1_SHM001_AG_A1_cr1_CHP_externaldata.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-7/E-NASC-7.processed.1.zip	cir1
NASCBioSource:37	Arabidopsis thaliana	3.9	induced_mutation	Col-0	PR1-luc	Not in stock centre	ein2	whole_organism	P-MTAB-24114	24 hour light	250 parts peat, 250 parts vermiculite, 1 part lime	21-22 C	Intercept insecticide 0.2g/l in water	Twice weekly	1 part 2:3:2 fertilizer	Glasshouse	NASCBioSampleA:37	Rosette Leaves	organism_part	P-MTAB-24111	NASCExtract:196	RNA	NASCLabelProtocol:1	NASCLabeledExtract:196	biotin	RNA	Affymetrix:Protocol:Hybridization-EukGE-WS2v4	0	25	10	2	0	50	4	15	25	600	0	25	10	4	600	600	0	30	15	4	25	Affymetrix:PhysicalBioAssay:SHM001_AG_A3_en2	A-AFFY-2	Affymetrix:Protocol:Scan	3	2	Affymetrix:Protocol:Percentile	Percentile	233	234	4495	245	4484	4510	222	4499	75	2	1.5	1.004	CELSHM001_AG_A3_en2_SHM001_AG_A3_en2_CEL_externaldata.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-7/E-NASC-7.raw.1.zip	Affymetrix:Protocol:ExpressionStat	ExpressionStat	5	0.04	0.06	0.015	0.0025	0.0025	0.003	0.003	1.1	1	0.422669	CHPSHM001_AG_A3_en2_SHM001_AG_A3_en2_CHP_externaldata.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-7/E-NASC-7.processed.1.zip	ein2