Source Name Characteristics [NASC:StockCode] Characteristics [OrganismPart] Characteristics [NASC:Growth Stage] Characteristics [StrainOrLine] Characteristics [Organism] Term Source REF Characteristics [Ecotype] Characteristics [GeneticModification] Protocol REF Parameter Value [Stratification] Parameter Value [Medium] Parameter Value [Lighting] Parameter Value [Temperature] Parameter Value [Atmosphere] Parameter Value [Location] Sample Name Protocol REF Extract Name Material Type Protocol REF Labeled Extract Name Label Material Type Protocol REF Hybridization Name Array Design REF Term Source REF Protocol REF Scan Name Array Data File Comment [ArrayExpress FTP file] Protocol REF Derived Array Data Matrix File Comment [Derived ArrayExpress FTP file] Factor Value [StrainOrLine] Cornah_A4-cornah-wsx_SRC_REP2 N5390 seedling 0.7 ws-4 Arabidopsis thaliana ncbitax NASCGrowProt:236 72 h at 4 C 1/2 strength Murashige and Skoog continuous light 22-25 C Normal Growth Room Cornah_A4-cornah-wsx_SRC_REP2 NASCExtractProtocol:3 39335687 total_RNA NASCLabelProtocol:1 Cornah_A4-cornah-wsx_EXT_REP2 biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 JC001_ATH1_A4.2-cornah-wsx A-AFFY-2 ArrayExpress Affymetrix:Protocol:Percentile JC001_ATH1_A4.2-cornah-wsx E-NASC-1-raw-data-39335919.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.raw.1.zip Affymetrix:Protocol:ExpressionStat E-NASC-1-processed-data-1341883838.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.processed.1.zip ws-4 Cornah_A3-cornah-msx_SRC_REP1 seedling 0.7 icl-2 Arabidopsis thaliana ncbitax Wassilewskija NASCGrowProt:216 72 h at 4 C 1/2 strength Murashige and Skoog continuous light 22-25 C Normal Growth Room Cornah_A3-cornah-msx_SRC_REP1 NASCExtractProtocol:3 39335647 total_RNA NASCLabelProtocol:1 Cornah_A3-cornah-msx_EXT_REP1 biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 JC001_ATH1_A3.1-cornah-msx A-AFFY-2 ArrayExpress Affymetrix:Protocol:Percentile JC001_ATH1_A3.1-cornah-msx E-NASC-1-raw-data-39335847.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.raw.1.zip Affymetrix:Protocol:ExpressionStat E-NASC-1-processed-data-1341883838.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.processed.1.zip icl-2 Cornah_A2-cornah-irv_SRC_REP1 seedling 0.7 icl-2 revertant Arabidopsis thaliana ncbitax Columbia-0 NASCGrowProt:215 72 h at 4 C 1/2 strength Murashige and Skoog continuous light 22-25 C Normal Growth Room Cornah_A2-cornah-irv_SRC_REP1 NASCExtractProtocol:3 39335639 total_RNA NASCLabelProtocol:1 Cornah_A2-cornah-col_EXT_REP1 biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 JC001_ATH1_A2.1-cornah-irv A-AFFY-2 ArrayExpress Affymetrix:Protocol:Percentile JC001_ATH1_A2.1-cornah-irv E-NASC-1-raw-data-39335793.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.raw.1.zip Affymetrix:Protocol:ExpressionStat E-NASC-1-processed-data-1341883838.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.processed.1.zip icl-2 revertant Cornah_A1-cornah-icl_SRC_REP2 seedling 0.7 icl-2 Arabidopsis thaliana ncbitax Columbia-0 NASCGrowProt:233 72 h at 4 C 1/2 strength Murashige and Skoog continuous light 22-25 C Normal Growth Room Cornah_A1-cornah-icl_SRC_REP2 NASCExtractProtocol:3 39335663 total_RNA NASCLabelProtocol:1 Cornah_A1-cornah-icl_EXT_REP2 biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 JC001_ATH1_A1-2-cornah-icl A-AFFY-2 ArrayExpress Affymetrix:Protocol:Percentile JC001_ATH1_A1-2-cornah-icl E-NASC-1-raw-data-39335757.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.raw.1.zip Affymetrix:Protocol:ExpressionStat E-NASC-1-processed-data-1341883838.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.processed.1.zip icl-2 Cornah_A3-cornah-msx_SRC_REP3 seedling 0.7 icl-2 Arabidopsis thaliana ncbitax Wassilewskija none NASCGrowProt:239 72 h at 4 C 1/2 strength Murashige and Skoog continuous light 22-25 C Normal Growth Room Cornah_A3-cornah-msx_SRC_REP3 NASCExtractProtocol:3 39335711 total_RNA NASCLabelProtocol:1 Cornah_A3-cornah-msx_EXT_REP3 biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 JC001_ATH1_A3.3-cornah-msx A-AFFY-2 ArrayExpress Affymetrix:Protocol:Percentile JC001_ATH1_A3.3-cornah-msx E-NASC-1-raw-data-39335883.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.raw.1.zip Affymetrix:Protocol:ExpressionStat E-NASC-1-processed-data-1341883838.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.processed.1.zip icl-2 Cornah_A3-cornah-msx_SRC_REP2 seedling 0.7 icl-2 Arabidopsis thaliana ncbitax Wassilewskija NASCGrowProt:235 72 h at 4 C 1/2 strength Murashige and Skoog continuous light 22-25 C Normal Growth Room Cornah_A3-cornah-msx_SRC_REP2 NASCExtractProtocol:3 39335679 total_RNA NASCLabelProtocol:1 Cornah_A3-cornah-msx_EXT_REP2 biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 JC001_ATH1_A3.2-cornah-msx A-AFFY-2 ArrayExpress Affymetrix:Protocol:Percentile JC001_ATH1_A3.2-cornah-msx E-NASC-1-raw-data-39335865.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.raw.1.zip Affymetrix:Protocol:ExpressionStat E-NASC-1-processed-data-1341883838.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.processed.1.zip icl-2 Cornah_A2-cornah-irv_SRC_REP3 seedling 0.7 icl-2 revertant Arabidopsis thaliana ncbitax Columbia-0 NASCGrowProt:238 72 h at 4 C 1/2 strength Murashige and Skoog continuous light 22-25 C Normal Growth Room Cornah_A2-cornah-irv_SRC_REP3 NASCExtractProtocol:3 39335703 total_RNA NASCLabelProtocol:1 Cornah_A2-cornah-col_EXT_REP3 biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 JC001_ATH1_A2.3-cornah-irv A-AFFY-2 ArrayExpress Affymetrix:Protocol:Percentile JC001_ATH1_A2.3-cornah-irv E-NASC-1-raw-data-39335829.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.raw.1.zip Affymetrix:Protocol:ExpressionStat E-NASC-1-processed-data-1341883838.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.processed.1.zip icl-2 revertant Cornah_A1-cornah-icl_SRC_REP3 seedling 0.7 icl-2 Arabidopsis thaliana ncbitax Columbia-0 NASCGrowProt:237 72 h at 4 C 1/2 strength Murashige and Skoog continuous light 22-25 C Normal Growth Room Cornah_A1-cornah-icl_SRC_REP3 NASCExtractProtocol:3 39335695 total_RNA NASCLabelProtocol:1 Cornah_A1-cornah-icl_EXT_REP3 biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 JC001_ATH1_A1-3-cornah-icl A-AFFY-2 ArrayExpress Affymetrix:Protocol:Percentile JC001_ATH1_A1-3-cornah-icl E-NASC-1-raw-data-39335775.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.raw.1.zip Affymetrix:Protocol:ExpressionStat E-NASC-1-processed-data-1341883838.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.processed.1.zip icl-2 Cornah_A4-cornah-wsx_SRC_REP3 N5390 seedling 0.7 ws-4 Arabidopsis thaliana ncbitax NASCGrowProt:240 72 h at 4 C 1/2 strength Murashige and Skoog continuous light 22-25 C Normal Growth Room Cornah_A4-cornah-wsx_SRC_REP3 NASCExtractProtocol:3 39335719 total_RNA NASCLabelProtocol:1 Cornah_A4-cornah-wsx_EXT_REP3 biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 JC001_ATH1_A4.3-cornah-wsx A-AFFY-2 ArrayExpress Affymetrix:Protocol:Percentile JC001_ATH1_A4.3-cornah-wsx E-NASC-1-raw-data-39335937.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.raw.1.zip Affymetrix:Protocol:ExpressionStat E-NASC-1-processed-data-1341883838.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.processed.1.zip ws-4 Cornah_A4-cornah-wsx_SRC_REP1 N5390 seedling 0.7 ws-4 Arabidopsis thaliana ncbitax NASCGrowProt:217 72 h at 4 C 1/2 strength Murashige and Skoog continuous light 22-25 C Normal Growth Room Cornah_A4-cornah-wsx_SRC_REP1 NASCExtractProtocol:3 39335655 total_RNA NASCLabelProtocol:1 Cornah_A4-cornah-wsx_EXT_REP1 biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 JC001_ATH1_A4.1-cornah-wsx A-AFFY-2 ArrayExpress Affymetrix:Protocol:Percentile JC001_ATH1_A4.1-cornah-wsx E-NASC-1-raw-data-39335901.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.raw.1.zip Affymetrix:Protocol:ExpressionStat E-NASC-1-processed-data-1341883838.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.processed.1.zip ws-4 Cornah_A1-cornah-icl_SRC_REP1 seedling 0.7 icl-2 Arabidopsis thaliana ncbitax Columbia-0 NASCGrowProt:214 72 h at 4 C 1/2 strength Murashige and Skoog continuous light 22-25 C Normal Growth Room Cornah_A1-cornah-icl_SRC_REP1 NASCExtractProtocol:3 39335631 total_RNA NASCLabelProtocol:1 Cornah_A1-cornah-icl_EXT_REP1 biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 JC001_ATH1_A1-1-cornah-icl A-AFFY-2 ArrayExpress Affymetrix:Protocol:Percentile JC001_ATH1_A1-1-cornah-icl E-NASC-1-raw-data-39335739.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.raw.1.zip Affymetrix:Protocol:ExpressionStat E-NASC-1-processed-data-1341883838.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.processed.1.zip icl-2 Cornah_A2-cornah-irv_SRC_REP2 seedling 0.7 icl-2 revertant Arabidopsis thaliana ncbitax Columbia-0 NASCGrowProt:234 72 h at 4 C 1/2 strength Murashige and Skoog continuous light 22-25 C Normal Growth Room Cornah_A2-cornah-irv_SRC_REP2 NASCExtractProtocol:3 39335671 total_RNA NASCLabelProtocol:1 Cornah_A2-cornah-col_EXT_REP2 biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 JC001_ATH1_A2.2-cornah-irv A-AFFY-2 ArrayExpress Affymetrix:Protocol:Percentile JC001_ATH1_A2.2-cornah-irv E-NASC-1-raw-data-39335811.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.raw.2.zip Affymetrix:Protocol:ExpressionStat E-NASC-1-processed-data-1341883838.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/NASC/E-NASC-1/E-NASC-1.processed.1.zip icl-2 revertant