ArrayExpress – functional genomics data
ArrayExpress Archive of Functional Genomics Data stores data from high-throughput functional genomics experiments, and provides these data for reuse to the research community.
10 September 2015 - ArrayExpress submission now supports "double-blind" peer review
"Double-blind" review happens when the manuscript authors and reviewers remain anonymous to one another. It is expected to reduce potential bias during the review process, and some journals have started supporting it. ArrayExpress submission tool "Annotare" now supports double-blind review by allowing submitters to enable an anonymity feature, which ensures reviewers only have access to redacted versions of the experiments they're reviewing, with sensitive fields such as "Contact" removed from the meta-data. Please refer to this guide on submitter anonymity for further details.
Information about how to search ArrayExpress, understand search results, how to submit data and FAQ can be found in our Help section.
Find out more about the Functional Genomics group.
Tools and Access
ArrayExpress Bioconductor package: an R package to access ArrayExpress and build data structures.
Programmatic access: query and download data using web services or JSON.
FTP access: data can be downloaded directly from our FTP site.
Discover up and down regulated genes in numerous experimental conditions in the Expression Atlas.
Explore the Experimental Factor Ontology used to support queries and annotation of ArrayExpress data.