John Berrisford

John Berrisford

Scientific Curator PDB/EMDB - Kleywegt team: Protein Data Bank in Europe
Scientific Curator PDB/EMDB - Velankar team: PDBe content and integration

ORCID iD: 0000-0003-4442-5871

Tel:+ 44 (0) 1223 49 2529 / Fax:+ 44 (0) 1223 494 468

Publications

2014

PDBe: Protein Data Bank in Europe.
Gutmanas A, Alhroub Y, Battle GM, Berrisford JM, Bochet E, Conroy MJ, Dana JM, Fernandez Montecelo MA, van Ginkel G, Gore SP, Haslam P, Hatherley R, Hendrickx PM, Hirshberg M, Lagerstedt I, Mir S, Mukhopadhyay A, Oldfield TJ, Patwardhan A, Rinaldi L, Sahni G, Sanz-García E, Sen S, Slowley RA, Velankar S, Wainwright ME, Kleywegt GJ.
Nucleic Acids Res Volume 42 (2014) p.d285-91
DOI: 10.1093/nar/gkt1180

2013

A long road towards the structure of respiratory complex I, a giant molecular proton pump.
Sazanov LA, Baradaran R, Efremov RG, Berrisford JM, Minhas G.
Biochem Soc Trans Volume 41 (2013) p.1265-1271
DOI: 10.1042/bst20130193

Crystal structure of the entire respiratory complex I.
Baradaran R, Berrisford JM, Minhas GS, Sazanov LA.
Nature Volume 494 (2013) p.443-448
DOI: 10.1038/nature11871

2012

The bacterial stressosome: a modular system that has been adapted to control secondary messenger signaling.
Quin MB, Berrisford JM, Newman JA, Baslé A, Lewis RJ, Marles-Wright J.
Structure Volume 20 (2012) p.350-363
DOI: 10.1016/j.str.2012.01.003

2009

Catalysis by Glomerella cingulata cutinase requires conformational cycling between the active and inactive states of its catalytic triad.
Nyon MP, Rice DW, Berrisford JM, Hounslow AM, Moir AJ, Huang H, Nathan S, Mahadi NM, Bakar FD, Craven CJ.
J Mol Biol Volume 385 (2009) p.226-235
DOI: 10.1016/j.jmb.2008.10.050

Structural basis for the mechanism of respiratory complex I.
Berrisford JM, Sazanov LA.
J Biol Chem Volume 284 (2009) p.29773-29783
DOI: 10.1074/jbc.m109.032144

2008

Crystallization and preliminary X-ray analysis of recombinant Glomerella cingulata cutinase.
Nyon MP, Rice DW, Berrisford JM, Huang H, Moir AJ, Craven CJ, Nathan S, Mahadi NM, Abu Bakar FD.
Acta Crystallogr Sect F Struct Biol Cryst Commun Volume 64 (2008) p.504-508
DOI: 10.1107/s1744309108012086

Chemical and NADH-induced, ROS-dependent, cross-linking between subunits of complex I from Escherichia coli and Thermus thermophilus.
Berrisford JM, Thompson CJ, Sazanov LA.
Biochemistry Volume 47 (2008) p.10262-10270
DOI: 10.1021/bi801160u

2006

Evidence supporting a cis-enediol-based mechanism for Pyrococcus furiosus phosphoglucose isomerase.
Berrisford JM, Hounslow AM, Akerboom J, Hagen WR, Brouns SJ, van der Oost J, Murray IA, Michael Blackburn G, Waltho JP, Rice DW, Baker PJ.
J Mol Biol Volume 358 (2006) p.1353-1366
DOI: 10.1016/j.jmb.2006.03.015

2004

The structures of inhibitor complexes of Pyrococcus furiosus phosphoglucose isomerase provide insights into substrate binding and catalysis.
Berrisford JM, Akerboom J, Brouns S, Sedelnikova SE, Turnbull AP, van der Oost J, Salmon L, Hardré R, Murray IA, Blackburn GM, Rice DW, Baker PJ.
J Mol Biol Volume 343 (2004) p.649-657
DOI: 10.1016/j.jmb.2004.08.061

2003

Purification, crystallization and preliminary crystallographic analysis of phosphoglucose isomerase from the hyperthermophilic archaeon Pyrococcus furiosus.
Akerboom J, Turnbull AP, Hargreaves D, Fisher M, de Geus D, Sedelnikova SE, Berrisford JM, Baker PJ, Verhees CH, van der Oost J, Rice DW.
Acta Crystallogr D Biol Crystallogr Volume 59 (2003) p.1822-1823
DOI: 10.1107/s090744490301610x

Crystal structure of Pyrococcus furiosus phosphoglucose isomerase. Implications for substrate binding and catalysis.
Berrisford JM, Akerboom J, Turnbull AP, de Geus D, Sedelnikova SE, Staton I, McLeod CW, Verhees CH, van der Oost J, Rice DW, Baker PJ.
J Biol Chem Volume 278 (2003) p.33290-33297
DOI: 10.1074/jbc.m305170200

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