Ian Streeter

Ian Streeter

Scientific Programmer - Resequencing Informatics - Flicek team: Vertebrate genomics

ORCID iD: 0000-0003-4024-3552

Tel:+ 44 (0) 1223 494 677 / Fax:+ 44 (0) 1223 494 468

Publications

2013

Integrative annotation of variants from 1092 humans: application to cancer genomics.
Khurana E, Fu Y, Colonna V, Mu XJ, Kang HM, Lappalainen T, Sboner A, Lochovsky L, Chen J, Harmanci A, Das J, Abyzov A, Balasubramanian S, Beal K, Chakravarty D, Challis D, Chen Y, Clarke D, Clarke L, Cunningham F, Evani US, Flicek P, Fragoza R, Garrison E, Gibbs R, Gümüs ZH, Herrero J, Kitabayashi N, Kong Y, Lage K, Liluashvili V, Lipkin SM, MacArthur DG, Marth G, Muzny D, Pers TH, Ritchie GR, Rosenfeld JA, Sisu C, Wei X, Wilson M, Xue Y, Yu F, 1000 Genomes Project Consortium, Dermitzakis ET, Yu H, Rubin MA, Tyler-Smith C, Gerstein M.
Science Volume 342 (2013) p.1235587
DOI: 10.1126/science.1235587

Cooperativity and rapid evolution of cobound transcription factors in closely related mammals.
Stefflova K, Thybert D, Wilson MD, Streeter I, Aleksic J, Karagianni P, Brazma A, Adams DJ, Talianidis I, Marioni JC, Flicek P, Odom DT.
Cell Volume 154 (2013) p.530-540
DOI: 10.1016/j.cell.2013.07.007

2012

An integrated map of genetic variation from 1,092 human genomes.
1000 Genomes Project Consortium, Abecasis GR, Auton A, Brooks LD, DePristo MA, Durbin RM, Handsaker RE, Kang HM, Marth GT, McVean GA.
Nature Volume 491 (2012) p.56-65
DOI: 10.1038/nature11632

2011

A molecular dynamics study of the interprotein interactions in collagen fibrils.
Streeter I, de Leeuw NH.
Soft Matter Volume 7 (2011) p.3373-3382
DOI: 10.1039/c0sm01192d

Mechanisms of structure generation during plastic compression of nanofibrillar collagen hydrogel scaffolds: towards engineering of collagen.
Hadjipanayi E, Ananta M, Binkowski M, Streeter I, Lu Z, Cui ZF, Brown RA, Mudera V.
J Tissue Eng Regen Med Volume 5 (2011) p.505-519
DOI: 10.1002/term.343

Binding of glycosaminoglycan saccharides to hydroxyapatite surfaces: A density functional theory study.
Streeter I, de Leeuw NH.
Proc Math Phys Eng Sci Volume 467 (2011) p.2084-2101
DOI: 10.1098/rspa.2010.0559

Oxygen consumption rate of cells in 3D culture: the use of experiment and simulation to measure kinetic parameters and optimise culture conditions.
Streeter I, Cheema U.
Analyst Volume 136 (2011) p.4013-4019
DOI: 10.1039/c1an15249a

2010

Atomistic modeling of collagen proteins in their fibrillar environment.
Streeter I, de Leeuw NH.
J Phys Chem B Volume 114 (2010) p.13263-13270
DOI: 10.1021/jp1059984

Aspartic acid racemization and collagen degradation markers reveal an accumulation of damage in tendon collagen that is enhanced with aging.
Thorpe CT, Streeter I, Pinchbeck GL, Goodship AE, Clegg PD, Birch HL.
J Biol Chem Volume 285 (2010) p.15674-15681
DOI: 10.1074/jbc.m109.077503

2008

Extraction of electrode kinetic parameters from microdisc voltammetric data measured under transport conditions intermediate between steady-state convergent and transient linear diffusion as typically applies to room temperature ionic liquids.
Barnes AS, Rogers EI, Streeter I, Aldous L, Hardacre C, Compton RG.
J Phys Chem B Volume 112 (2008) p.7560-7565
DOI: 10.1021/jp711897b

Chronoamperometry and cyclic voltammetry at conical electrodes, microelectrodes, and electrode arrays: theory.
Dickinson EJ, Streeter I, Compton RG.
J Phys Chem B Volume 112 (2008) p.4059-4066
DOI: 10.1021/jp711936y

2007

Steady state voltammetry at non-uniformly accessible electrodes: a study of Tafel plots for microdisc and tubular flow electrodes in the reversible and irreversible limits of electron transfer.
Streeter I, Compton RG.
Phys Chem Chem Phys Volume 9 (2007) p.862-870
DOI: 10.1039/b615417d

2006

Voltammetric and electrochemical ESR studies of oxidation reactions mediated by tris(4-bromophenyl)amine in acetonitrile.
Wain AJ, Streeter I, Thompson M, Fietkau N, Drouin L, Fairbanks AJ, Compton RG.
J Phys Chem B Volume 110 (2006) p.2681-2691
DOI: 10.1021/jp0535137

2005

Cathodic reduction of bisulfite and sulfur dioxide in aqueous solutions on copper electrodes: an electrochemical ESR study.
Streeter I, Wain AJ, Davis J, Compton RG.
J Phys Chem B Volume 109 (2005) p.18500-18506
DOI: 10.1021/jp058119n

In situ electrochemical ESR and voltammetric studies on the anodic oxidation of para-haloanilines in acetonitrile.
Streeter I, Wain AJ, Thompson M, Compton RG.
J Phys Chem B Volume 109 (2005) p.12636-12649
DOI: 10.1021/jp058064p

2004

Abrasively immobilised multiwalled carbon nanotube agglomerates: a novel electrode material approach for the analytical sensing of pH.
Wildgoose GG, Leventis HC, Streeter I, Lawrence NS, Wilkins SJ, Jiang L, Jones TG, Compton RG.
Chemphyschem Volume 5 (2004) p.669-677
DOI: 10.1002/cphc.200400030

Derivatised carbon powder electrodes: reagentless pH sensors.
Leventis HC, Streeter I, Wildgoose GG, Lawrence NS, Jiang L, Jones TG, Compton RG.
Talanta Volume 63 (2004) p.1039-1051
DOI: 10.1016/j.talanta.2004.01.017

2003

Instantaneous, stoichiometric generation of powerfully reducing states of protein active sites using Eu(II) and polyaminocarboxylate ligands.
Vincent KA, Tilley GJ, Quammie NC, Streeter I, Burgess BK, Cheesman MR, Armstrong FA.
Chem Commun (Camb) Volume (2003) p.2590-2591
DOI: 10.1039/b308188e