Elspeth Bruford

Elspeth Bruford

Coordinator of HGNC - Birney projects

ORCID iD: 0000-0002-8380-5247

Tel:+ 44 (0) 1223 492 624 / Fax:+ 44 (0) 1223 494 468

Publications

2015

Genenames.org: the HGNC resources in 2015.
Gray KA, Yates B, Seal RL, Wright MW, Bruford EA.
Nucleic Acids Res Volume 43 (2015) p.d1079-85
DOI: 10.1093/nar/gku1071

2014

Locus Reference Genomic: reference sequences for the reporting of clinically relevant sequence variants.
MacArthur JA, Morales J, Tully RE, Astashyn A, Gil L, Bruford EA, Larsson P, Flicek P, Dalgleish R, Maglott DR, Cunningham F.
Nucleic Acids Res Volume 42 (2014) p.d873-8
DOI: 10.1093/nar/gkt1198

2013

Genenames.org: the HGNC resources in 2013.
Gray KA, Daugherty LC, Gordon SM, Seal RL, Wright MW, Bruford EA.
Nucleic Acids Res Volume 41 (2013) p.d545-52
DOI: 10.1093/nar/gks1066

The ABCs of membrane transporters in health and disease (SLC series): introduction.
Hediger MA, Clémençon B, Burrier RE, Bruford EA.
Mol Aspects Med Volume 34 (2013) p.95-107
DOI: 10.1016/j.mam.2012.12.009

Response to Diaz.
Bögershausen N, Bruford E, Wollnik B.
Clin Genet Volume 83 (2013) p.296
DOI: 10.1111/cge.12099

Skirting the pitfalls: a clear-cut nomenclature for H3K4 methyltransferases.
Bögershausen N, Bruford E, Wollnik B.
Clin Genet Volume 83 (2013) p.212-214
DOI: 10.1111/cge.12050

Update on the Kelch-like (KLHL) gene family.
Dhanoa BS, Cogliati T, Satish AG, Bruford EA, Friedman JS.
Hum Genomics Volume 7 (2013) p.13
DOI: 10.1186/1479-7364-7-13

Vive la différence: naming structural variants in the human reference genome.
Seal RL, Wright MW, Gray KA, Bruford EA.
Hum Genomics Volume 7 (2013) p.12
DOI: 10.1186/1479-7364-7-12

2012

In the beginning there was babble...
Klionsky DJ, Bruford EA, Cherry JM, Hodgkin J, Laulederkind SJ, Singer AG.
Autophagy Volume 8 (2012) p.1165-1167
DOI: 10.4161/auto.20665

Gene family matters: expanding the HGNC resource.
Daugherty LC, Seal RL, Wright MW, Bruford EA.
Hum Genomics Volume 6 (2012) p.4
DOI: 10.1186/1479-7364-6-4

Toward community standards in the quest for orthologs.
Dessimoz C, Gabaldón T, Roos DS, Sonnhammer EL, Herrero J, Quest for Orthologs Consortium.
Bioinformatics Volume 28 (2012) p.900-904
DOI: 10.1093/bioinformatics/bts050

2011

RNAcentral: A vision for an international database of RNA sequences.
Bateman A, Agrawal S, Birney E, Bruford EA, Bujnicki JM, Cochrane G, Cole JR, Dinger ME, Enright AJ, Gardner PP, Gautheret D, Griffiths-Jones S, Harrow J, Herrero J, Holmes IH, Huang HD, Kelly KA, Kersey P, Kozomara A, Lowe TM, Marz M, Moxon S, Pruitt KD, Samuelsson T, Stadler PF, Vilella AJ, Vogel JH, Williams KP, Wright MW, Zwieb C.
RNA Volume 17 (2011) p.1941-1946
DOI: 10.1261/rna.2750811

genenames.org: the HGNC resources in 2011.
Seal RL, Gordon SM, Lush MJ, Wright MW, Bruford EA.
Nucleic Acids Res Volume 39 (2011) p.d514-9
DOI: 10.1093/nar/gkq892

Naming 'junk': human non-protein coding RNA (ncRNA) gene nomenclature.
Wright MW, Bruford EA.
Hum Genomics Volume 5 (2011) p.90-98
DOI: 10.1186/1479-7364-5-2-90

2010

Highlights of the 'gene nomenclature across species' meeting.
Bruford EA.
Hum Genomics Volume 4 (2010) p.213-217
DOI: 10.1186/1479-7364-4-3-213

2009

The SDR (short-chain dehydrogenase/reductase and related enzymes) nomenclature initiative.
Persson B, Kallberg Y, Bray JE, Bruford E, Dellaporta SL, Favia AD, Duarte RG, Jörnvall H, Kavanagh KL, Kedishvili N, Kisiela M, Maser E, Mindnich R, Orchard S, Penning TM, Thornton JM, Adamski J, Oppermann U.
Chem Biol Interact Volume 178 (2009) p.94-98
DOI: 10.1016/j.cbi.2008.10.040

Guidelines for the nomenclature of the human heat shock proteins.
Kampinga HH, Hageman J, Vos MJ, Kubota H, Tanguay RM, Bruford EA, Cheetham ME, Chen B, Hightower LE.
Cell Stress Chaperones Volume 14 (2009) p.105-111
DOI: 10.1007/s12192-008-0068-7

2008

Consensus nomenclature for the human ArfGAP domain-containing proteins.
Kahn RA, Bruford E, Inoue H, Logsdon JM Jr, Nie Z, Premont RT, Randazzo PA, Satake M, Theibert AB, Zapp ML, Cassel D.
J Cell Biol Volume 182 (2008) p.1039-1044
DOI: 10.1083/jcb.200806041

The HGNC Database in 2008: a resource for the human genome.
Bruford EA, Lush MJ, Wright MW, Sneddon TP, Povey S, Birney E.
Nucleic Acids Res Volume 36 (2008) p.d445-8
DOI: 10.1093/nar/gkm881

2007

Classification and nomenclature of all human homeobox genes.
Holland PW, Booth HA, Bruford EA.
BMC Biol Volume 5 (2007) p.47
DOI: 10.1186/1741-7007-5-47

Renaming the DSCR1/Adapt78 gene family as RCAN: regulators of calcineurin.
Davies KJ, Ermak G, Rothermel BA, Pritchard M, Heitman J, Ahnn J, Henrique-Silva F, Crawford D, Canaider S, Strippoli P, Carinci P, Min KT, Fox DS, Cunningham KW, Bassel-Duby R, Olson EN, Zhang Z, Williams RS, Gerber HP, Pérez-Riba M, Seo H, Cao X, Klee CB, Redondo JM, Maltais LJ, Bruford EA, Povey S, Molkentin JD, McKeon FD, Duh EJ, Crabtree GR, Cyert MS, de la Luna S, Estivill X.
FASEB J Volume 21 (2007) p.3023-3028
DOI: 10.1096/fj.06-7246com

HCOP: a searchable database of human orthology predictions.
Eyre TA, Wright MW, Lush MJ, Bruford EA.
Brief Bioinform Volume 8 (2007) p.2-5
DOI: 10.1093/bib/bbl030

2006

Human and orthologous gene nomenclature.
Wright MW, Bruford EA.
Gene Volume 369 (2006) p.1-6
DOI: 10.1016/j.gene.2005.10.029

The HUGO Gene Nomenclature Database, 2006 updates.
Eyre TA, Ducluzeau F, Sneddon TP, Povey S, Bruford EA, Lush MJ.
Nucleic Acids Res Volume 34 (2006) p.d319-21
DOI: 10.1093/nar/gkj147

Human chromosome 11 DNA sequence and analysis including novel gene identification.
Taylor TD, Noguchi H, Totoki Y, Toyoda A, Kuroki Y, Dewar K, Lloyd C, Itoh T, Takeda T, Kim DW, She X, Barlow KF, Bloom T, Bruford E, Chang JL, Cuomo CA, Eichler E, FitzGerald MG, Jaffe DB, LaButti K, Nicol R, Park HS, Seaman C, Sougnez C, Yang X, Zimmer AR, Zody MC, Birren BW, Nusbaum C, Fujiyama A, Hattori M, Rogers J, Lander ES, Sakaki Y.
Nature Volume 440 (2006) p.497-500
DOI: 10.1038/nature04632

2005

HCOP: the HGNC comparison of orthology predictions search tool.
Wright MW, Eyre TA, Lush MJ, Povey S, Bruford EA.
Mamm Genome Volume 16 (2005) p.827-828
DOI: 10.1007/s00335-005-0103-2

The HSP90 family of genes in the human genome: insights into their divergence and evolution.
Chen B, Piel WH, Gui L, Bruford E, Monteiro A.
Genomics Volume 86 (2005) p.627-637
DOI: 10.1016/j.ygeno.2005.08.012

Mammalian SP/KLF transcription factors: bring in the family.
Suske G, Bruford E, Philipsen S.
Genomics Volume 85 (2005) p.551-556
DOI: 10.1016/j.ygeno.2005.01.005

The DNA sequence of the human X chromosome.
Ross MT, Grafham DV, Coffey AJ, Scherer S, McLay K, Muzny D, Platzer M, Howell GR, Burrows C, Bird CP, Frankish A, Lovell FL, Howe KL, Ashurst JL, Fulton RS, Sudbrak R, Wen G, Jones MC, Hurles ME, Andrews TD, Scott CE, Searle S, Ramser J, Whittaker A, Deadman R, Carter NP, Hunt SE, Chen R, Cree A, Gunaratne P, Havlak P, Hodgson A, Metzker ML, Richards S, Scott G, Steffen D, Sodergren E, Wheeler DA, Worley KC, Ainscough R, Ambrose KD, Ansari-Lari MA, Aradhya S, Ashwell RI, Babbage AK, Bagguley CL, Ballabio A, Banerjee R, Barker GE, Barlow KF, Barrett IP, Bates KN, Beare DM, Beasley H, Beasley O, Beck A, Bethel G, Blechschmidt K, Brady N, Bray-Allen S, Bridgeman AM, Brown AJ, Brown MJ, Bonnin D, Bruford EA, Buhay C, Burch P, Burford D, Burgess J, Burrill W, Burton J, Bye JM, Carder C, Carrel L, Chako J, Chapman JC, Chavez D, Chen E, Chen G, Chen Y, Chen Z, Chinault C, Ciccodicola A, Clark SY, Clarke G, Clee CM, Clegg S, Clerc-Blankenburg K, Clifford K, Cobley V, Cole CG, Conquer JS, Corby N, Connor RE, David R, Davies J, Davis C, Davis J, Delgado O, Deshazo D, Dhami P, Ding Y, Dinh H, Dodsworth S, Draper H, Dugan-Rocha S, Dunham A, Dunn M, Durbin KJ, Dutta I, Eades T, Ellwood M, Emery-Cohen A, Errington H, Evans KL, Faulkner L, Francis F, Frankland J, Fraser AE, Galgoczy P, Gilbert J, Gill R, Glöckner G, Gregory SG, Gribble S, Griffiths C, Grocock R, Gu Y, Gwilliam R, Hamilton C, Hart EA, Hawes A, Heath PD, Heitmann K, Hennig S, Hernandez J, Hinzmann B, Ho S, Hoffs M, Howden PJ, Huckle EJ, Hume J, Hunt PJ, Hunt AR, Isherwood J, Jacob L, Johnson D, Jones S, de Jong PJ, Joseph SS, Keenan S, Kelly S, Kershaw JK, Khan Z, Kioschis P, Klages S, Knights AJ, Kosiura A, Kovar-Smith C, Laird GK, Langford C, Lawlor S, Leversha M, Lewis L, Liu W, Lloyd C, Lloyd DM, Loulseged H, Loveland JE, Lovell JD, Lozado R, Lu J, Lyne R, Ma J, Maheshwari M, Matthews LH, McDowall J, McLaren S, McMurray A, Meidl P, Meitinger T, Milne S, Miner G, Mistry SL, Morgan M, Morris S, Müller I, Mullikin JC, Nguyen N, Nordsiek G, Nyakatura G, O'Dell CN, Okwuonu G, Palmer S, Pandian R, Parker D, Parrish J, Pasternak S, Patel D, Pearce AV, Pearson DM, Pelan SE, Perez L, Porter KM, Ramsey Y, Reichwald K, Rhodes S, Ridler KA, Schlessinger D, Schueler MG, Sehra HK, Shaw-Smith C, Shen H, Sheridan EM, Shownkeen R, Skuce CD, Smith ML, Sotheran EC, Steingruber HE, Steward CA, Storey R, Swann RM, Swarbreck D, Tabor PE, Taudien S, Taylor T, Teague B, Thomas K, Thorpe A, Timms K, Tracey A, Trevanion S, Tromans AC, d'Urso M, Verduzco D, Villasana D, Waldron L, Wall M, Wang Q, Warren J, Warry GL, Wei X, West A, Whitehead SL, Whiteley MN, Wilkinson JE, Willey DL, Williams G, Williams L, Williamson A, Williamson H, Wilming L, Woodmansey RL, Wray PW, Yen J, Zhang J, Zhou J, Zoghbi H, Zorilla S, Buck D, Reinhardt R, Poustka A, Rosenthal A, Lehrach H, Meindl A, Minx PJ, Hillier LW, Willard HF, Wilson RK, Waterston RH, Rice CM, Vaudin M, Coulson A, Nelson DL, Weinstock G, Sulston JE, Durbin R, Hubbard T, Gibbs RA, Beck S, Rogers J, Bentley DR.
Nature Volume 434 (2005) p.325-337
DOI: 10.1038/nature03440

2004

Integrative annotation of 21,037 human genes validated by full-length cDNA clones.
Imanishi T, Itoh T, Suzuki Y, O'Donovan C, Fukuchi S, Koyanagi KO, Barrero RA, Tamura T, Yamaguchi-Kabata Y, Tanino M, Yura K, Miyazaki S, Ikeo K, Homma K, Kasprzyk A, Nishikawa T, Hirakawa M, Thierry-Mieg J, Thierry-Mieg D, Ashurst J, Jia L, Nakao M, Thomas MA, Mulder N, Karavidopoulou Y, Jin L, Kim S, Yasuda T, Lenhard B, Eveno E, Suzuki Y, Yamasaki C, Takeda J, Gough C, Hilton P, Fujii Y, Sakai H, Tanaka S, Amid C, Bellgard M, Bonaldo Mde F, Bono H, Bromberg SK, Brookes AJ, Bruford E, Carninci P, Chelala C, Couillault C, de Souza SJ, Debily MA, Devignes MD, Dubchak I, Endo T, Estreicher A, Eyras E, Fukami-Kobayashi K, Gopinath GR, Graudens E, Hahn Y, Han M, Han ZG, Hanada K, Hanaoka H, Harada E, Hashimoto K, Hinz U, Hirai M, Hishiki T, Hopkinson I, Imbeaud S, Inoko H, Kanapin A, Kaneko Y, Kasukawa T, Kelso J, Kersey P, Kikuno R, Kimura K, Korn B, Kuryshev V, Makalowska I, Makino T, Mano S, Mariage-Samson R, Mashima J, Matsuda H, Mewes HW, Minoshima S, Nagai K, Nagasaki H, Nagata N, Nigam R, Ogasawara O, Ohara O, Ohtsubo M, Okada N, Okido T, Oota S, Ota M, Ota T, Otsuki T, Piatier-Tonneau D, Poustka A, Ren SX, Saitou N, Sakai K, Sakamoto S, Sakate R, Schupp I, Servant F, Sherry S, Shiba R, Shimizu N, Shimoyama M, Simpson AJ, Soares B, Steward C, Suwa M, Suzuki M, Takahashi A, Tamiya G, Tanaka H, Taylor T, Terwilliger JD, Unneberg P, Veeramachaneni V, Watanabe S, Wilming L, Yasuda N, Yoo HS, Stodolsky M, Makalowski W, Go M, Nakai K, Takagi T, Kanehisa M, Sakaki Y, Quackenbush J, Okazaki Y, Hayashizaki Y, Hide W, Chakraborty R, Nishikawa K, Sugawara H, Tateno Y, Chen Z, Oishi M, Tonellato P, Apweiler R, Okubo K, Wagner L, Wiemann S, Strausberg RL, Isogai T, Auffray C, Nomura N, Gojobori T, Sugano S.
PLoS Biol Volume 2 (2004) p.e162
DOI: 10.1371/journal.pbio.0020162

Gene map of the extended human MHC.
Horton R, Wilming L, Rand V, Lovering RC, Bruford EA, Khodiyar VK, Lush MJ, Povey S, Talbot CC Jr, Wright MW, Wain HM, Trowsdale J, Ziegler A, Beck S.
Nat Rev Genet Volume 5 (2004) p.889-899
DOI: 10.1038/nrg1489

The ABCs of solute carriers: physiological, pathological and therapeutic implications of human membrane transport proteinsIntroduction.
Hediger MA, Romero MF, Peng JB, Rolfs A, Takanaga H, Bruford EA.
Pflugers Arch Volume 447 (2004) p.465-468
DOI: 10.1007/s00424-003-1192-y

2002

A unified nomenclature for the superfamily of TRP cation channels.
Montell C, Birnbaumer L, Flockerzi V, Bindels RJ, Bruford EA, Caterina MJ, Clapham DE, Harteneck C, Heller S, Julius D, Kojima I, Mori Y, Penner R, Prawitt D, Scharenberg AM, Schultz G, Shimizu N, Zhu MX.
Mol Cell Volume 9 (2002) p.229-231
DOI: 10.1016/s1097-2765(02)00448-3

Guidelines for human gene nomenclature.
Wain HM, Bruford EA, Lovering RC, Lush MJ, Wright MW, Povey S.
Genomics Volume 79 (2002) p.464-470
DOI: 10.1006/geno.2002.6748

2001

The HUGO Gene Nomenclature Committee (HGNC).
Povey S, Lovering R, Bruford E, Wright M, Lush M, Wain H.
Hum Genet Volume 109 (2001) p.678-680
DOI: 10.1007/s00439-001-0615-0

Eukaryotic DNA polymerases: proposal for a revised nomenclature.
Burgers PM, Koonin EV, Bruford E, Blanco L, Burtis KC, Christman MF, Copeland WC, Friedberg EC, Hanaoka F, Hinkle DC, Lawrence CW, Nakanishi M, Ohmori H, Prakash L, Prakash S, Reynaud CA, Sugino A, Todo T, Wang Z, Weill JC, Woodgate R.
J Biol Chem Volume 276 (2001) p.43487-43490
DOI: 10.1074/jbc.r100056200

1997

Linkage mapping in 29 Bardet-Biedl syndrome families confirms loci in chromosomal regions 11q13, 15q22.3-q23, and 16q21.
Bruford EA, Riise R, Teague PW, Porter K, Thomson KL, Moore AT, Jay M, Warburg M, Schinzel A, Tommerup N, Tornqvist K, Rosenberg T, Patton M, Mansfield DC, Wright AF.
Genomics Volume 41 (1997) p.93-99
DOI: 10.1006/geno.1997.4613

1995

A high-resolution integrated physical, cytogenetic, and genetic map of human chromosome 11: distal p13 to proximal p15.1.
Fantes JA, Oghene K, Boyle S, Danes S, Fletcher JM, Bruford EA, Williamson K, Seawright A, Schedl A, Hanson I.
Genomics Volume 25 (1995) p.447-461
DOI: 10.1016/0888-7543(95)80045-n

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