Asif Tamuri

Asif Tamuri

Research Associate in Molecular Evolution - Goldman research group

ORCID iD: 0000-0001-6633-3789

Tel:+ 44 (0) 1223 494 655 / Fax:+ 44 (0) 1223 494 468

Publications

2016

ALVIS: interactive non-aggregative visualization and explorative analysis of multiple sequence alignments.
Schwarz RF, Tamuri AU, Kultys M, King J, Godwin J, Florescu AM, Schultz J, Goldman N.
Nucleic acids research Volume 44 (2016) p.e77

2014

Transcriptional diversity during lineage commitment of human blood progenitors.
Chen L, Kostadima M, Martens JH, Canu G, Garcia SP, Turro E, Downes K, Macaulay IC, Bielczyk-Maczynska E, Coe S, Farrow S, Poudel P, Burden F, Jansen SB, Astle WJ, Attwood A, Bariana T, de Bono B, Breschi A, Chambers JC, BRIDGE Consortium, Choudry FA, Clarke L, Coupland P, van der Ent M, Erber WN, Jansen JH, Favier R, Fenech ME, Foad N, Freson K, van Geet C, Gomez K, Guigo R, Hampshire D, Kelly AM, Kerstens HH, Kooner JS, Laffan M, Lentaigne C, Labalette C, Martin T, Meacham S, Mumford A, Nürnberg S, Palumbo E, van der Reijden BA, Richardson D, Sammut SJ, Slodkowicz G, Tamuri AU, Vasquez L, Voss K, Watt S, Westbury S, Flicek P, Loos R, Goldman N, Bertone P, Read RJ, Richardson S, Cvejic A, Soranzo N, Ouwehand WH, Stunnenberg HG, Frontini M, Rendon A.
Science (New York, N.Y.) Volume 345 (2014) p.1251033

A penalized-likelihood method to estimate the distribution of selection coefficients from phylogenetic data.
Tamuri AU, Goldman N, dos Reis M.
Genetics Volume 197 (2014) p.257-271

Genome sequencing of normal cells reveals developmental lineages and mutational processes.
Behjati S, Huch M, van Boxtel R, Karthaus W, Wedge DC, Tamuri AU, Martincorena I, Petljak M, Alexandrov LB, Gundem G, Tarpey PS, Roerink S, Blokker J, Maddison M, Mudie L, Robinson B, Nik-Zainal S, Campbell P, Goldman N, van de Wetering M, Cuppen E, Clevers H, Stratton MR.
Nature Volume 513 (2014) p.422-425

2013

SMIM1 underlies the Vel blood group and influences red blood cell traits.
Cvejic A, Haer-Wigman L, Stephens JC, Kostadima M, Smethurst PA, Frontini M, van den Akker E, Bertone P, Bielczyk-Maczyńska E, Farrow S, Fehrmann RS, Gray A, de Haas M, Haver VG, Jordan G, Karjalainen J, Kerstens HH, Kiddle G, Lloyd-Jones H, Needs M, Poole J, Soussan AA, Rendon A, Rieneck K, Sambrook JG, Schepers H, Silljé HH, Sipos B, Swinkels D, Tamuri AU, Verweij N, Watkins NA, Westra HJ, Stemple D, Franke L, Soranzo N, Stunnenberg HG, Goldman N, van der Harst P, van der Schoot CE, Ouwehand WH, Albers CA.
Nature genetics Volume 45 (2013) p.542-545

2012

Estimating the distribution of selection coefficients from phylogenetic data using sitewise mutation-selection models.
Tamuri AU, dos Reis M, Goldstein RA.
Genetics Volume 190 (2012) p.1101-1115

2011

PCR master mixes harbour murine DNA sequences. Caveat emptor!
Tuke PW, Tettmar KI, Tamuri A, Stoye JP, Tedder RS.
PloS one Volume 6 (2011) p.e19953

Charting the host adaptation of influenza viruses.
dos Reis M, Tamuri AU, Hay AJ, Goldstein RA.
Molecular biology and evolution Volume 28 (2011) p.1755-1767

2010

ArchSchema: a tool for interactive graphing of related Pfam domain architectures.
Tamuri AU, Laskowski RA.
Bioinformatics (Oxford, England) Volume 26 (2010) p.1260-1261

2009

Identifying changes in selective constraints: host shifts in influenza.
Tamuri AU, Dos Reis M, Hay AJ, Goldstein RA.
PLoS computational biology Volume 5 (2009) p.e1000564