Amaia Sangrador

Amaia Sangrador

Scientific Database Curator - Finn team: Protein families
Scientific Database Curator - Hunter team: InterPro

ORCID iD: 0000-0001-6688-429X

Tel:+ 44 (0) 1223 494 560 / Fax:+ 44 (0) 1223 494 468

Publications

2013

Gene Ontology annotations and resources.
Gene Ontology Consortium, Blake JA, Dolan M, Drabkin H, Hill DP, Li N, Sitnikov D, Bridges S, Burgess S, Buza T, McCarthy F, Peddinti D, Pillai L, Carbon S, Dietze H, Ireland A, Lewis SE, Mungall CJ, Gaudet P, Chrisholm RL, Fey P, Kibbe WA, Basu S, Siegele DA, McIntosh BK, Renfro DP, Zweifel AE, Hu JC, Brown NH, Tweedie S, Alam-Faruque Y, Apweiler R, Auchinchloss A, Axelsen K, Bely B, Blatter M-, Bonilla C, Bouguerleret L, Boutet E, Breuza L, Bridge A, Chan WM, Chavali G, Coudert E, Dimmer E, Estreicher A, Famiglietti L, Feuermann M, Gos A, Gruaz-Gumowski N, Hieta R, Hinz C, Hulo C, Huntley R, James J, Jungo F, Keller G, Laiho K, Legge D, Lemercier P, Lieberherr D, Magrane M, Martin MJ, Masson P, Mutowo-Muellenet P, O'Donovan C, Pedruzzi I, Pichler K, Poggioli D, Porras Millán P, Poux S, Rivoire C, Roechert B, Sawford T, Schneider M, Stutz A, Sundaram S, Tognolli M, Xenarios I, Foulgar R, Lomax J, Roncaglia P, Khodiyar VK, Lovering RC, Talmud PJ, Chibucos M, Giglio MG, Chang H-, Hunter S, McAnulla C, Mitchell A, Sangrador A, Stephan R, Harris MA, Oliver SG, Rutherford K, Wood V, Bahler J, Lock A, Kersey PJ, McDowall DM, Staines DM, Dwinell M, Shimoyama M, Laulederkind S, Hayman T, Wang S-, Petri V, Lowry T, D'Eustachio P, Matthews L, Balakrishnan R, Binkley G, Cherry JM, Costanzo MC, Dwight SS, Engel SR, Fisk DG, Hitz BC, Hong EL, Karra K, Miyasato SR, Nash RS, Park J, Skrzypek MS, Weng S, Wong ED, Berardini TZ, Huala E, Mi H, Thomas PD, Chan J, Kishore R, Sternberg P, Van Auken K, Howe D, Westerfield M.
Nucleic Acids Res Volume 41 (2013) p.d530-5
DOI: 10.1093/nar/gks1050

2012

InterPro in 2011: new developments in the family and domain prediction database.
Hunter S, Jones P, Mitchell A, Apweiler R, Attwood TK, Bateman A, Bernard T, Binns D, Bork P, Burge S, de Castro E, Coggill P, Corbett M, Das U, Daugherty L, Duquenne L, Finn RD, Fraser M, Gough J, Haft D, Hulo N, Kahn D, Kelly E, Letunic I, Lonsdale D, Lopez R, Madera M, Maslen J, McAnulla C, McDowall J, McMenamin C, Mi H, Mutowo-Muellenet P, Mulder N, Natale D, Orengo C, Pesseat S, Punta M, Quinn AF, Rivoire C, Sangrador-Vegas A, Selengut JD, Sigrist CJA, Scheremetjew M, Tate J, Thimmajanarthanan M, Thomas PD, Wu CH, Yeats C, Yong S.
Nucleic Acids Res Volume 40 (2012) p.4725-4725

Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation.
Burge S, Kelly E, Lonsdale D, Mutowo-Muellenet P, McAnulla C, Mitchell A, Sangrador-Vegas A, Yong SY, Mulder N, Hunter S.
Database (Oxford) Volume 2012 (2012) p.bar068
DOI: 10.1093/database/bar068

2009

Comparative genomics of lactic acid bacteria reveals a niche-specific gene set.
O'Sullivan O, O'Callaghan J, Sangrador-Vegas A, McAuliffe O, Slattery L, Kaleta P, Callanan M, Fitzgerald GF, Ross RP, Beresford T.
BMC Microbiol Volume 9 (2009) p.50
DOI: 10.1186/1471-2180-9-50

2008

Genome sequence of Lactobacillus helveticus, an organism distinguished by selective gene loss and insertion sequence element expansion.
Callanan M, Kaleta P, O'Callaghan J, O'Sullivan O, Jordan K, McAuliffe O, Sangrador-Vegas A, Slattery L, Fitzgerald GF, Beresford T, Ross RP.
J Bacteriol Volume 190 (2008) p.727-735
DOI: 10.1128/jb.01295-07

A cDNA microarray assessment of gene expression in the liver of rainbow trout (Oncorhynchus mykiss) in response to a handling and confinement stressor.
Cairns MT, Johnson MC, Talbot AT, Pemmasani JK, McNeill RE, Houeix B, Sangrador-Vegas A, Pottinger TG.
Comp Biochem Physiol Part D Genomics Proteomics Volume 3 (2008) p.51-66
DOI: 10.1016/j.cbd.2007.04.009

2007

Characterization of plasmid pASV479 from Bifidobacterium pseudolongum subsp. globosum and its use for expression vector construction.
Sangrador-Vegas A, Stanton C, van Sinderen D, Fitzgerald GF, Ross RP.
Plasmid Volume 58 (2007) p.140-147
DOI: 10.1016/j.plasmid.2007.02.004

2006

Cloning and characterization of two genes encoding rainbow trout homologues of the IFITM protein family.
Johnson MC, Sangrador-Vegas A, Smith TJ, Cairns MT.
Vet Immunol Immunopathol Volume 110 (2006) p.357-362
DOI: 10.1016/j.vetimm.2005.12.007

2005

Cloning and characterization of a homologue of the alpha inhibitor of NF-kappaB in Rainbow trout (Oncorhynchus mykiss).
Sangrador-Vegas A, Smith TJ, Cairns MT.
Vet Immunol Immunopathol Volume 103 (2005) p.1-7
DOI: 10.1016/j.vetimm.2004.08.007

2004

Molecular cloning and expression analysis of rainbow trout (Oncorhynchus mykiss) matrix metalloproteinase-9.
Johnson MC, Sangrador-Vegas A, Smith TJ, Cairns MT.
Fish Shellfish Immunol Volume 17 (2004) p.499-503
DOI: 10.1016/j.fsi.2004.05.005

2002

Molecular cloning of an IL-8-like CXC chemokine and tissue factor in rainbow trout (Oncorhynchus mykiss) by use of suppression subtractive hybridization.
Sangrador-Vegas A, Lennington JB, Smith TJ.
Cytokine Volume 17 (2002) p.66-70
DOI: 10.1006/cyto.2001.0991

2000

Cloning and characterization of the rainbow trout (Oncorhynchus mykiss) type II interleukin-1 receptor cDNA.
Sangrador-Vegas A, Martin SA, O'Dea PG, Smith TJ.
Eur J Biochem Volume 267 (2000) p.7031-7037
DOI: 10.1046/j.1432-1327.2000.01800.x

1998

Growth arrest of Schizosaccharomyces pombe following overexpression of mouse type 1 protein phosphatases.
Sangrador A, Andrés I, Eguiraun A, Lorenzo ML, Ortiz JM.
Mol Gen Genet Volume 259 (1998) p.449-456
DOI: 10.1007/s004380050835

1993

Invasive disease caused by multiple clones of Corynebacterium diphtheriae.
Efstratiou A, Tiley SM, Sangrador A, Greenacre E, Cookson BD, Chen SC, Mallon R, Gilbert GL.
Clin Infect Dis Volume 17 (1993) p.136

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