IntAct March 2014: Dataset of the month and service updates

IntAct Dataset of the month: The binary protein-protein interaction landscape of Escherichia coli.

Detail of E. coli interactome

Dataset of the Month

This month we feature The binary protein-protein interaction landscape of Escherichia coli, by Rajagopala et al. (Nature Biotech., doi: 10.1038/nbt.2831).

The data were submitted directly to IntAct as part of the publication process. You can search it using IMEx ID IM-22059 on the IntAct website and the IMEx Consortium pages.

If you would like your data to become our dataset of the month, please submit it prior to publication and contact us at intact-help@ebi.ac.uk

IntAct release news

In February we issued release R176. The IntAct database now contains 12,531 publications, 32,512 experiments and 443,773 binary interactions.

Network analysis training

Registration is now open for the 2014 Networks and Pathways course, which we hold annually at EMBL-EBI on the Genome Campus in Hinxton, Cambridge, UK.

The course runs from Monday, 9 June 2014 to Friday, 13 June 2014. During the course you will learn about:

  • Molecular interaction and pathway databases: IntAct, Reactome

  • Network analysis tools: Cytoscape and selected plug-ins (BINGO)

  • Ontologies, identifiers and data standards: GO, PSICQUIC, IMEx, HUPO-PSI

HUPO PSI spring workshop

If you are interested in becoming involved in the further development of the molecular interaction standard formats and controlled vocabularies, join us at the 2014 Spring workshop in Frankfurt, Germany. Registration is free.