spacer
spacer

Differences

This shows you the differences between two versions of the page.

services:sfc:readseq_rest [2012/09/05 09:23]
hpm (172.22.68.212) created
services:sfc:readseq_rest [2013/10/09 14:03] (current)
hpm (172.22.68.212)
Line 1: Line 1:
====== Readseq (REST) ====== ====== Readseq (REST) ======
- 
-===== Important ==== 
- 
-Please note that this is a **beta service**, so please avoid using it in production environments. Please report any feedback or issues encountered to us via. [[http://www.ebi.ac.uk/support/index.php?query=WebServices|EMBL-EBI Support]]. 
- 
-We kindly ask all users of EMBL-EBI Web Services to submit tool jobs in batches of up to 25 at a time and to not submit more until the results and processing has completed for these. This enables users as well as the service maintainers to deal more easily with local and remote network outages as well as scheduled or unscheduled downtime. 
- 
-Service provision happens on a fair-share basis. Overzealous usage of a particular resource will be dealt with in accordance to the [[http://www.ebi.ac.uk/Information/termsofuse.html|EBI's Terms of Use]]. 
===== Description ===== ===== Description =====
-Readseq reads and converts biosequences between a selection of common biological sequence formats, including EMBL, GenBank and fasta sequence formats.+Readseq ((Gilbert D. (2003)\\  
 +**Sequence File Format Conversion with Command-Line Readseq**\\  
 +Current Protocols in Bioinformatics, APPENDIX 1E\\  
 +PubMed: [[http://europepmc.org/abstract/MED/18428689|18428689]]\\  
 +DOI: [[http://dx.doi.org/10.1002/0471250953.bia01es00|10.1002/0471250953.bia01es00]] \\ 
 +)) ((http://iubio.bio.indiana.edu/soft/molbio/readseq/java/)) reads and converts biosequences between a selection of common biological sequence formats, including EMBL, GenBank and fasta sequence formats.
For more information see: For more information see:
Line 17: Line 14:
  * [[.:Readseq (SOAP)|Document/literal SOAP service]]   * [[.:Readseq (SOAP)|Document/literal SOAP service]]
  * [[http://iubio.bio.indiana.edu/soft/molbio/readseq/java/|Readseq home]]   * [[http://iubio.bio.indiana.edu/soft/molbio/readseq/java/|Readseq home]]
 +
 +===== Important ====
 +
 +We kindly ask all users of EMBL-EBI Web Services to submit tool jobs in batches of up to 30 at a time and to not submit more until the results and processing has completed for these. This enables users as well as the service maintainers to deal more easily with local and remote network outages as well as scheduled or unscheduled downtime.
 +
 +Service provision happens on a fair-share basis. Overzealous usage of a particular resource will be dealt with in accordance to the [[http://www.ebi.ac.uk/about/terms-of-use|EMBL-EBI's Terms of Use]].
===== Clients ===== ===== Clients =====
Line 66: Line 69:
^ URL        | http://www.ebi.ac.uk/Tools/services/rest/readseq/run/ || ^ URL        | http://www.ebi.ac.uk/Tools/services/rest/readseq/run/ ||
-^ POST        | ''email''        | User e-mail address. |+^ POST        | ''email''        | User e-mail address. See [[help:faq#why_do_you_need_my_e-mail_address|Why do you need my e-mail address?]] |
^            | ''title''        | an optional title for the job. | ^            | ''title''        | an optional title for the job. |
^            | ''inputformat''  | sequence format for input data | ^            | ''inputformat''  | sequence format for input data |
 
services/sfc/readseq_rest.1346833414.txt · Last modified: 2012/09/05 09:23 by hpm
spacer
spacer