spacer
spacer

WSCensor Clients

Description

CENSOR screens sequences against a reference collection of sequence repeats, “censors” (masks) homologous portions with masking symbols and generates a report classifying all found repeats.

For more information about this tool see:

Web Service

For details of the service used by these clients see CENSOR Web Service.

C# .NET Client

.NET runtime

The Microsoft .NET runtime is already installed on most MS Windows systems. The Microsoft .NET runtime is available via Microsoft Update or as a download (see http://msdn.microsoft.com/netframework/).

For MacOS X, Linux and other non-Windows systems see Mono or DotGNU.

Get the client

Download the C# client:

Run without arguments to get a usage summary:

wscensor.exe


Java Client

Dependencies

Download and unzip the library files lib-1.4.zip and add the jars to the Java classpath.

Get the client

Download the Java client:

To get usage information run the client without arguments:

java -Djava.ext.dirs=lib -jar WSCensor.jar


Perl Client

Install SOAP::Lite

To run the Perl client you need to install SOAP::Lite. SOAP::Lite is a collection of Perl modules which provide a simple and lightweight interface to the Simple Object Access Protocol (SOAP) for both client and server applications. This client requires SOAP::Lite version 0.60.

Get the client

Download the Perl client: censor.pl

To get usage information run without arguments:

perl censor.pl

Workflows

Workflow engines such as Taverna and Triana offer a simple way of combining individual web services into complex applications.

Taverna

A basic workflow showing how to use WSCensor can be found on myExperiment.

 
services/archive/so/wscensor_clients.txt · Last modified: 2013/04/23 16:34 by hpm
spacer
spacer