Table of Contents
On Monday 28th March 2011 the WSKalign service, used by these clients, was decommissioned and replaced by the following services:
The service documentation and clients below are historical and provided solely for reference purposes.
A fast and accurate multiple sequence alignment algorithm.
For more information about this tool see:
For details of the service used by these clients see WSKalign.
The Microsoft .NET runtime is already installed on most MS Windows systems. The Microsoft .NET runtime is available via Microsoft Update or as a download (see http://msdn.microsoft.com/netframework/).
Download the C# client:
Run without arguments to get a usage summary:
Download and unzip the library files
Download the Java client:
To get usage information run the client without arguments:
java -Djava.ext.dirs=lib -jar WSKalign.jar
To run the Perl client you should install SOAP::Lite first. SOAP::Lite is a collection of Perl modules which provides a simple and lightweight interface to the Simple Object Access Protocol (SOAP) both on client and server side. The client requires SOAP::Lite version 0.60.
Download the Perl client:
To get details of usage run:
A basic workflow showing how to use WSKalign can be found on myExperiment.