Registry

Total: 8,304,697 Interactions from 22 PSICQUIC Services, of which 6 are currently down.

Filter:

Name Status Interactions Version URLs Description Restricted Tags
APID Interactomes
Inactive
0
-
SOAP: http://cicblade.dep.usal.es/psicquic-ws/webservices/psicquic
REST: http://cicblade.dep.usal.es/psicquic-ws/webservices/current/search/

REST example

NO
protein-protein
imported
spoke expansion
clustered  

BioGrid
Active
1,513,281
1.3.14
SOAP: http://tyersrest.tyerslab.com:8805/psicquic/webservices/psicquic
REST: http://tyersrest.tyerslab.com:8805/psicquic/webservices/current/search/

REST example

NO
protein-protein
internally-curated
rapid curation
spoke expansion
evidence  

bhf-ucl
Active
4,019
1.3.14
SOAP: http://www.ebi.ac.uk/Tools/webservices/psicquic/bhf-ucl/webservices/psicquic
REST: http://www.ebi.ac.uk/Tools/webservices/psicquic/bhf-ucl/webservices/current/search/

REST example

NO
protein-protein
smallmolecule-protein
nucleicacid-protein
internally-curated
imex curation
mimix curation
spoke expansion
evidence  

DIP
Inactive
0
-
SOAP: http://imex.mbi.ucla.edu/xpsq-dip-all/service/soap/current
REST: http://imex.mbi.ucla.edu/xpsq-dip-all/service/rest/current/search/

REST example

NO
protein-protein
internally-curated
imex curation
mimix curation
spoke expansion
evidence  

DIP-IMEx
Inactive
0
-
SOAP: http://imex.mbi.ucla.edu/xpsq-dip-imex/service/soap/current/
REST: http://imex.mbi.ucla.edu/xpsq-dip-imex/service/rest/current/

REST example

NO
protein-protein
internally-curated
imex curation
mimix curation
spoke expansion
evidence  

HPIDb
Active
5,046
1.3.14
SOAP: http://www.ebi.ac.uk/Tools/webservices/psicquic/hpidb/webservices/psicquic
REST: http://www.ebi.ac.uk/Tools/webservices/psicquic/hpidb/webservices/current/search/

REST example

NO
protein-protein
internally-curated
mimix curation
spoke expansion
evidence  

InnateDB
Active
33,295
1.3.9
SOAP: http://psicquic.curated.innatedb.com/webservices/psicquic
REST: http://psicquic.curated.innatedb.com/webservices/current/search/

REST example
This service queries all interactions that have been manually annotated to MIMIx standards by the InnateDB curation team.
NO
protein-protein
internally-curated
spoke expansion
mimix curation
evidence
nucleicacid-protein  

InnateDB-All
Inactive
578,350

Thank you for using InnateDB's web services!

We are currently updating the underlying data, please come back later. We apologize for the inconvenience.

If you have any questions or concerns, please contact us at innatedb-mail@sfu.ca.


SOAP: http://psicquic.all.innatedb.com/webservices/psicquic
REST: http://psicquic.all.innatedb.com/webservices/current/search/

REST example
This service queries all interactions in InnateDB including both interactions curated by the InnateDB curation team and those integrated from other databases.
NO
protein-protein
internally-curated
spoke expansion
mimix curation
evidence
nucleicacid-protein  

IntAct
Active
669,408
1.3.14
SOAP: http://www.ebi.ac.uk/Tools/webservices/psicquic/intact/webservices/psicquic
REST: http://www.ebi.ac.uk/Tools/webservices/psicquic/intact/webservices/current/search/

REST example
Detailed curation of experimentally verified interaction evidences extracted from the literature or directly submitted by authors as part of the publication process.
NO
protein-protein
smallmolecule-protein
nucleicacid-protein
internally-curated
imported
imex curation
mimix curation
spoke expansion
evidence  

IMEx
Active
699,314
1.3.14
SOAP: http://www.ebi.ac.uk/Tools/webservices/psicquic/imex/webservices/psicquic
REST: http://www.ebi.ac.uk/Tools/webservices/psicquic/imex/webservices/current/search/

REST example
IMEx contains experimentally verified protein interaction records annotated by members of the IMEx Consortium (www.imexconsortium.org) to a consistant, detailed curation standard.
NO
protein-protein
smallmolecule-protein
nucleicacid-protein
internally-curated
imex curation
spoke expansion
evidence  

mentha
Active
1,272,096
1.3.13
SOAP: http://mentha.uniroma2.it:9090/psicquic/webservices/psicquic
REST: http://mentha.uniroma2.it:9090/psicquic/webservices/current/search/

REST example

NO
protein-protein
imported
clustered
spoke expansion  

MPIDB
Active
1,751
1.3.14
SOAP: http://www.ebi.ac.uk/Tools/webservices/psicquic/mpidb/webservices/psicquic
REST: http://www.ebi.ac.uk/Tools/webservices/psicquic/mpidb/webservices/current/search/

REST example

NO
protein-protein
internally-curated
imex curation
spoke expansion
evidence  

iRefIndex
Active
2,338,337
1.3.14
SOAP: http://irefindex.vib.be/webservices/psicquic
REST: http://irefindex.vib.be/webservices/current/search/

REST example

NO
protein-protein
imported
bipartite expansion
evidence  

MatrixDB
Active
128,545
1.3.14
SOAP: http://matrixdb.univ-lyon1.fr:8080/psicquic/webservices
REST: http://matrixdb.univ-lyon1.fr:8080/psicquic/webservices/current/search/

REST example
MatrixDB focuses on interactions established by extracellular matrix proteins, proteoglycans and polysaccharides. This service queries experimentally-supported interactions curated from the literature by the MatrixDB curation team.
NO
protein-protein
smallmolecule-protein
internally-curated
imex curation
mimix curation
spoke expansion
evidence  

MINT
Active
126,711
1.3.14
SOAP: http://www.ebi.ac.uk/Tools/webservices/psicquic/mint/webservices/psicquic
REST: http://www.ebi.ac.uk/Tools/webservices/psicquic/mint/webservices/current/search/

REST example

NO
protein-protein
internally-curated
imex curation
mimix curation
spoke expansion
evidence  

BIND
Inactive
0
-
SOAP: http://webservice.baderlab.org:8480/psicquic-ws/webservices/psicquic
REST: http://webservice.baderlab.org:8480/psicquic-ws/webservices/current/search/

REST example

NO
protein-protein
smallmolecule-protein
nucleicacid-protein
spoke expansion
clustered  

I2D
Active
817,915
1.1.6
SOAP: http://ophid.utoronto.ca/psicquic-ws/webservices/psicquic
REST: http://ophid.utoronto.ca/psicquic-ws/webservices/current/search/

REST example

NO
protein-protein
internally-curated
evidence  

UniProt
Active
17,516
1.3.14
SOAP: http://www.ebi.ac.uk/Tools/webservices/psicquic/uniprot/webservices/psicquic
REST: http://www.ebi.ac.uk/Tools/webservices/psicquic/uniprot/webservices/current/search/

REST example

NO
protein-protein
nucleicacid-protein
smallmolecule-protein
internally-curated
imex curation
evidence
spoke expansion
mimix curation  

MBInfo
Active
638
1.3.14
SOAP: http://www.ebi.ac.uk/Tools/webservices/psicquic/mbinfo/webservices/psicquic
REST: http://www.ebi.ac.uk/Tools/webservices/psicquic/mbinfo/webservices/current/search/

REST example

NO
protein-protein
nucleicacid-protein
smallmolecule-protein
internally-curated
imex curation
evidence
spoke expansion  

VirHostNet
Active
28,814
1.3.14
SOAP: http://virhostnet.prabi.fr:9090/psicquic/webservices/psicquic
REST: http://virhostnet.prabi.fr:9090/psicquic/webservices/current/search/

REST example

NO
protein-protein
evidence
internally-curated
clustered
rapid curation
experimentally-observed
imported
spoke expansion  

Spike
Inactive
0
1.2.0
SOAP: http://spike.cs.tau.ac.il/psicquic-ws/webservices
REST: http://spike.cs.tau.ac.il/psicquic-ws/webservices/current/search/

REST example

NO
protein-protein
evidence
internally-curated  

EBI-GOA-nonIntAct
Active
69,661
1.3.13
SOAP: https://www.ebi.ac.uk/QuickGO/psicquic/webservices/psicquic
REST: https://www.ebi.ac.uk/QuickGO/psicquic/webservices/current/search/

REST example

NO
protein-protein
nucleicacid-protein
rapid curation
experimentally-observed  

About PSICQUIC Registry

The PSICQUIC Registry contains the list of PSICQUIC services available, their tags, and their current status. The registry also shows the number of total binary interactions that each resource has made available through PSICQUIC. For more information about PSICQUIC, please visit the Google Project documentation.