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EBIEMBL-EBI Web Serviceshelpdatabases

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Table of Contents

Available databases

Dbfetch

These are the databases available to the WSDbfetch web service:

Database Description dbfetch name
EMBL EMBL Nucleotide Sequence Database, Europe's primary nucleotide sequence resource. The main sources of the DNA and RNA sequences in the database are submissions from individual researchers, genome sequencing projects and patent applications. embl
EMBL CDS EMBLCDS is a database of nucleotide sequences of the CDS (coding sequence) features, as annotated in EMBL database. EMBLCDS record contains the nucleotide sequence of the CDS region, accompanying annotation from the parent nucleotide entry and the additional automatically generated annotation. emblcds
EMBL Sequence Version Archive The EMBL Sequence Version Archive is a repository of all entries which have ever appeared in the EMBL Nucleotide Sequence Database. emblsva
EMBL Contig The EMBLCON database division represents complete genomes and other long sequences constructed from segment entries. emblcon
EMBL Annotated cons This database contains Annotated EMBLCON entries emblann
UniProt Knowledgebase The UniProt Knowledgebase (UniProtKB) is the central access point for extensive curated protein information, including function, classification, and cross-references. Search UniProtKB to retrieve “everything that is known” about a particular sequence. uniprot
Genome Reviews The Genome Reviews Database consists of curated versions of complete genome entries from the EMBL/GenBank/DDBJ nucleotide sequence database. genomereviews
HGVBASE The Human Genic Bi-Allelic Sequences Database is an attempt to summarize all known sequence variations in the human genome and to facilitate research into how genotypes affect common diseases, drug responses, and other complex phenotypes. hgvbase
InterPro The InterPro database (Integrated Resource of Protein Domains and Functional Sites) is an integrated documentation resource for protein families, domains and functional sites. It was developed initially as a means of rationalising the complementary efforts of the PROSITE, PRINTS, Pfam and ProDom database projects, but now also includes the SMART, TIGRFAMs, PIR SuperFamilies and most recently SUPERFAMILY databases. interpro
UniProt Clusters The UniProt Reference Clusters (UniRef) databases combine closely related sequences into a single record to speed searches. There are three different non-redundant databases with different sequence identity cut-offs. In UniRef100, UniRef90 and UniRef50 databases no pair of sequences in the representative set has >100%, >90% or >50% mutual sequence identity. The three UniRef databases allow the user to choose between a fast search and a truly comprehensive one. uniref50, uniref90, uniref100
UniProt Archive The UniProt Archive (UniParc) contains available protein sequences collected from many different sources. The sequence data are archived to facilitate examination of changes to sequence data. Search UniParc if you want to examine the “history” of a particular sequence. uniparc
UniProtKB Version Archive The UniProtKB Sequence/Annotation Version Archive (UniSave) is a repository of UniProtKB/Swiss-Prot and UniProtKB/TrEMBL entry versions. unisave
International Protein Index The International Protein Index (IPI) provides non-redundant proteome sets for a selection of higher eukaryotes, e.g. Arabidopsis, Chicken, Mouse, Human, etc. Cross-references are provided to the various source databases. ipi
Protein Structure Sequences Protein sequences from structures described in the Brookhaven Protein Data Bank (PDB) pdb
EPO Patent Protein Sequences Protein sequences appearing in patents from the European Patent Office (EPO) epo_prt
JPO Patent Protein Sequences Protein sequences appearing in patents from the Japanese Patent Office (JPO) jpo_prt
KIPO Patent Protein Sequences Protein sequences appearing in patents from the Korean Intellectual Property Office (KIPO) kipo_prt
USPTO Patent Protein Sequences Protein sequences appearing in patents from the United States Patent and Trademark Office (USPTO) uspto_prt
Medline MEDLINE contains bibliographic citations and author abstracts from more than 4,000 biomedical journals published in the United States and 70 other countries. The files contains over 11 million citations dating back to the mid-1960's, updated weekly. medline
RefSeq Genome The NCBI Reference Sequence project (RefSeq) will provide reference sequence standards for the naturally occurring molecules of the central dogma, from chromosomes to mRNAs to proteins. refseq
RefSeq Proteome The NCBI Reference Sequence project (RefSeq) will provide reference sequence standards for the naturally occurring molecules of the central dogma, from chromosomes to mRNAs to proteins. refseqp

Similarity & Homology Search Databases

Protein databases

DB Name Description Tools
uniprot UniProt Knowledgebase NCBI BLAST, PSI-BLAST, PHI-BLAST, WU-BLAST, FASTA, MPSrch
swissprot UniProtKB/Swiss-Prot NCBI BLAST, PSI-BLAST, PHI-BLAST, WU-BLAST, FASTA, MPSrch, ScanPS
uniref100 UniProt Clusters 100% NCBI BLAST, PSI-BLAST, PHI-BLAST, WU-BLAST, FASTA, MPSrch, ScanPS
uniref90 UniProt Clusters 90% NCBI BLAST, PSI-BLAST, PHI-BLAST, WU-BLAST, FASTA, MPSrch, ScanPS
uniref50 UniProt Clusters 50% NCBI BLAST, PSI-BLAST, PHI-BLAST, WU-BLAST, FASTA, MPSrch, ScanPS
uniparc UniProt Archive NCBI BLAST, PSI-BLAST, PHI-BLAST, WU-BLAST, FASTA, MPSrch
ipi International Protein Index NCBI BLAST, PSI-BLAST, PHI-BLAST, WU-BLAST, FASTA, MPSrch, ScanPS
pdb Protein Structure Sequences NCBI BLAST, PSI-BLAST, PHI-BLAST, WU-BLAST, FASTA, MPSrch, ScanPS
sgt Structural Genomics Targets NCBI BLAST, PSI-BLAST, PHI-BLAST, WU-BLAST, FASTA, MPSrch, ScanPS
intact IntAct NCBI BLAST, PSI-BLAST, PHI-BLAST, WU-BLAST, FASTA
imgthlap IMGT/HLA NCBI BLAST, PSI-BLAST, PHI-BLAST, WU-BLAST, FASTA, MPSrch
epop EPO Patent Protein Sequences NCBI BLAST, PSI-BLAST, PHI-BLAST, WU-BLAST, FASTA, MPSrch
jpop JPO Patent Protein Sequences NCBI BLAST, PSI-BLAST, PHI-BLAST, WU-BLAST, FASTA, MPSrch
kpop KIPO Patent Protein Sequences NCBI BLAST, PSI-BLAST, PHI-BLAST, WU-BLAST, FASTA, MPSrch
uspop USPTO Patent Protein Sequences NCBI BLAST, PSI-BLAST, PHI-BLAST, WU-BLAST, FASTA, MPSrch

Nucleotide databases

These are the nucleotide databases you can use with our homology searches web services:

DB Name Description Tools
embl EMBL Database NCBI BLAST, WU-BLAST, FASTA
em_rel EMBL Release NCBI BLAST, WU-BLAST, FASTA
emnew EMBL Updates NCBI BLAST, WU-BLAST, FASTA
emcds EMBL Coding Sequence NCBI BLAST, WU-BLAST, FASTA
em_rel_env EMBL Environmental NCBI BLAST, WU-BLAST, FASTA
em_rel_est_env EMBL EST Environmental NCBI BLAST, WU-BLAST, FASTA
em_rel_gss_env EMBL GSS Environmental NCBI BLAST, WU-BLAST, FASTA
em_rel_htg_env EMBL HTG Environmental NCBI BLAST, WU-BLAST, FASTA
em_rel_pat_env EMBL Patent Environmental NCBI BLAST, WU-BLAST, FASTA
em_rel_std_env EMBL Standard Environmental NCBI BLAST, WU-BLAST, FASTA
em_rel_fun EMBL Fungi NCBI BLAST, WU-BLAST, FASTA
em_rel_est_fun EMBL EST Fungi NCBI BLAST, WU-BLAST, FASTA
em_rel_gss_fun EMBL GSS Fungi NCBI BLAST, WU-BLAST, FASTA
em_rel_htc_fun EMBL HTC Fungi NCBI BLAST, WU-BLAST, FASTA
em_rel_htg_fun EMBL HTG Fungi NCBI BLAST, WU-BLAST, FASTA
em_rel_pat_fun EMBL Patent Fungi NCBI BLAST, WU-BLAST, FASTA
em_rel_std_fun EMBL Standard Fungi NCBI BLAST, WU-BLAST, FASTA
em_rel_sts_fun EMBL STS Fungi NCBI BLAST, WU-BLAST, FASTA
em_rel_tpa_fun EMBL TPA Fungi NCBI BLAST, WU-BLAST, FASTA
em_rel_hum EMBL Human NCBI BLAST, WU-BLAST, FASTA
em_rel_est_hum EMBL EST Human NCBI BLAST, WU-BLAST, FASTA
em_rel_gss_hum EMBL GSS Human NCBI BLAST, WU-BLAST, FASTA
em_rel_htc_hum EMBL HTC Human NCBI BLAST, WU-BLAST, FASTA
em_rel_htg_hum EMBL HTG Human NCBI BLAST, WU-BLAST, FASTA
em_rel_pat_hum EMBL Patent Human NCBI BLAST, WU-BLAST, FASTA
em_rel_std_hum EMBL Standard Human NCBI BLAST, WU-BLAST, FASTA
em_rel_sts_hum EMBL STS Human NCBI BLAST, WU-BLAST, FASTA
em_rel_tpa_hum EMBL TPA Human NCBI BLAST, WU-BLAST, FASTA
em_rel_inv EMBL Invertebrate NCBI BLAST, WU-BLAST, FASTA
em_rel_est_inv EMBL EST Invertebrate NCBI BLAST, WU-BLAST, FASTA
em_rel_gss_inv EMBL GSS Invertebrate NCBI BLAST, WU-BLAST, FASTA
em_rel_htc_inv EMBL HTC Invertebrate NCBI BLAST, WU-BLAST, FASTA
em_rel_htg_inv EMBL HTG Invertebrate NCBI BLAST, WU-BLAST, FASTA
em_rel_pat_inv EMBL Patent Invertebrate NCBI BLAST, WU-BLAST, FASTA
em_rel_std_inv EMBL Standard Invertebrate NCBI BLAST, WU-BLAST, FASTA
em_rel_sts_inv EMBL STS Invertebrate NCBI BLAST, WU-BLAST, FASTA
em_rel_tpa_inv EMBL TPA Invertebrate NCBI BLAST, WU-BLAST, FASTA
em_rel_mam EMBL Mammal NCBI BLAST, WU-BLAST, FASTA
em_rel_est_mam EMBL EST Mammal NCBI BLAST, WU-BLAST, FASTA
em_rel_gss_mam EMBL GSS Mammal NCBI BLAST, WU-BLAST, FASTA
em_rel_htc_mam EMBL HTC Mammal NCBI BLAST, WU-BLAST, FASTA
em_rel_htg_mam EMBL HTG Mammal NCBI BLAST, WU-BLAST, FASTA
em_rel_pat_mam EMBL Patent Mammal NCBI BLAST, WU-BLAST, FASTA
em_rel_std_mam EMBL Standard Mammal NCBI BLAST, WU-BLAST, FASTA
em_rel_sts_mam EMBL STS Mammal NCBI BLAST, WU-BLAST, FASTA
em_rel_tpa_mam EMBL TPA Mammal NCBI BLAST, WU-BLAST, FASTA
em_rel_mus EMBL Mouse NCBI BLAST, WU-BLAST, FASTA
em_rel_est_mus EMBL EST Mouse NCBI BLAST, WU-BLAST, FASTA
em_rel_gss_mus EMBL GSS Mouse NCBI BLAST, WU-BLAST, FASTA
em_rel_htc_mus EMBL HTC Mouse NCBI BLAST, WU-BLAST, FASTA
em_rel_htg_mus EMBL HTG Mouse NCBI BLAST, WU-BLAST, FASTA
em_rel_pat_mus EMBL Patent Mouse NCBI BLAST, WU-BLAST, FASTA
em_rel_std_mus EMBL Standard Mouse NCBI BLAST, WU-BLAST, FASTA
em_rel_sts_mus EMBL STS Mouse NCBI BLAST, WU-BLAST, FASTA
em_rel_tpa_mus EMBL TPA Mouse NCBI BLAST, WU-BLAST, FASTA
em_rel_phg EMBL Phage NCBI BLAST, WU-BLAST, FASTA
em_rel_gss_phg EMBL GSS Phage NCBI BLAST, WU-BLAST, FASTA
em_rel_htg_phg EMBL HTG Phage NCBI BLAST, WU-BLAST, FASTA
em_rel_pat_phg EMBL Patent Phage NCBI BLAST, WU-BLAST, FASTA
em_rel_std_phg EMBL Standard Phage NCBI BLAST, WU-BLAST, FASTA
em_rel_tpa_phg EMBL TPA Phage NCBI BLAST, WU-BLAST, FASTA
em_rel_pln EMBL Plant NCBI BLAST, WU-BLAST, FASTA
em_rel_est_pln EMBL EST Plant NCBI BLAST, WU-BLAST, FASTA
em_rel_gss_pln EMBL GSS Plant NCBI BLAST, WU-BLAST, FASTA
em_rel_htc_pln EMBL HTC Plant NCBI BLAST, WU-BLAST, FASTA
em_rel_htg_pln EMBL HTG Plant NCBI BLAST, WU-BLAST, FASTA
em_rel_pat_pln EMBL Patent Plant NCBI BLAST, WU-BLAST, FASTA
em_rel_std_pln EMBL Standard Plant NCBI BLAST, WU-BLAST, FASTA
em_rel_sts_pln EMBL STS Plant NCBI BLAST, WU-BLAST, FASTA
em_rel_tpa_pln EMBL TPA Plant NCBI BLAST, WU-BLAST, FASTA
em_rel_pro EMBL Prokaryote NCBI BLAST, WU-BLAST, FASTA
em_rel_est_pro EMBL EST Prokaryote NCBI BLAST, WU-BLAST, FASTA
em_rel_gss_pro EMBL GSS Prokaryote NCBI BLAST, WU-BLAST, FASTA
em_rel_htc_pro EMBL HTC Prokaryote NCBI BLAST, WU-BLAST, FASTA
em_rel_htg_pro EMBL HTG Prokaryote NCBI BLAST, WU-BLAST, FASTA
em_rel_pat_pro EMBL Patent Prokaryote NCBI BLAST, WU-BLAST, FASTA
em_rel_std_pro EMBL Standard Prokaryote NCBI BLAST, WU-BLAST, FASTA
em_rel_sts_pro EMBL STS Prokaryote NCBI BLAST, WU-BLAST, FASTA
em_rel_tpa_pro EMBL TPA Prokaryote NCBI BLAST, WU-BLAST, FASTA
em_rel_rod EMBL Rodent NCBI BLAST, WU-BLAST, FASTA
em_rel_est_rod EMBL EST Rodent NCBI BLAST, WU-BLAST, FASTA
em_rel_gss_rod EMBL GSS Rodent NCBI BLAST, WU-BLAST, FASTA
em_rel_htc_rod EMBL HTC Rodent NCBI BLAST, WU-BLAST, FASTA
em_rel_htg_rod EMBL HTG Rodent NCBI BLAST, WU-BLAST, FASTA
em_rel_pat_rod EMBL Patent Rodent NCBI BLAST, WU-BLAST, FASTA
em_rel_std_rod EMBL Standard Rodent NCBI BLAST, WU-BLAST, FASTA
em_rel_sts_rod EMBL STS Rodent NCBI BLAST, WU-BLAST, FASTA
em_rel_tpa_rod EMBL TPA Rodent NCBI BLAST, WU-BLAST, FASTA
em_rel_syn EMBL Synthetic NCBI BLAST, WU-BLAST, FASTA
em_rel_pat_syn EMBL Patent Synthetic NCBI BLAST, WU-BLAST, FASTA
em_rel_std_syn EMBL Standard Synthetic NCBI BLAST, WU-BLAST, FASTA
em_rel_tpa_syn EMBL TPA Synthetic NCBI BLAST, WU-BLAST, FASTA
em_rel_tgn EMBL Transgenic NCBI BLAST, WU-BLAST, FASTA
em_rel_std_tgn EMBL Standard Transgenic NCBI BLAST, WU-BLAST, FASTA
em_rel_unc EMBL Unclassified NCBI BLAST, WU-BLAST, FASTA
em_rel_pat_unc EMBL Patent Unclassified NCBI BLAST, WU-BLAST, FASTA
em_rel_std_unc EMBL Standard Unclassified NCBI BLAST, WU-BLAST, FASTA
em_rel_vrl EMBL Viral NCBI BLAST, WU-BLAST, FASTA
em_rel_gss_vrl EMBL GSS Viral NCBI BLAST, WU-BLAST, FASTA
em_rel_htg_vrl EMBL HTG Viral NCBI BLAST, WU-BLAST, FASTA
em_rel_pat_vrl EMBL Patent Viral NCBI BLAST, WU-BLAST, FASTA
em_rel_std_vrl EMBL Standard Viral NCBI BLAST, WU-BLAST, FASTA
em_rel_tpa_vrl EMBL TPA Viral NCBI BLAST, WU-BLAST, FASTA
em_rel_vrt EMBL Vertibrate NCBI BLAST, WU-BLAST, FASTA
em_rel_est_vrt EMBL EST Vertebrate NCBI BLAST, WU-BLAST, FASTA
em_rel_gss_vrt EMBL GSS Vertibrate NCBI BLAST, WU-BLAST, FASTA
em_rel_htc_vrt EMBL HTC Vertibrate NCBI BLAST, WU-BLAST, FASTA
em_rel_htg_vrt EMBL HTG Vertibrate NCBI BLAST, WU-BLAST, FASTA
em_rel_pat_vrt EMBL Patent Vertibrate NCBI BLAST, WU-BLAST, FASTA
em_rel_std_vrt EMBL Standard Vertibrate NCBI BLAST, WU-BLAST, FASTA
em_rel_sts_vrt EMBL STS Vertibrate NCBI BLAST, WU-BLAST, FASTA
em_rel_tpa_vrt EMBL TPA Vertibrate NCBI BLAST, WU-BLAST, FASTA
em_rel_est EMBL Expressed Sequence Tag NCBI BLAST, WU-BLAST, FASTA
em_rel_gss EMBL Genome Survey Sequence NCBI BLAST, WU-BLAST, FASTA
em_rel_htc EMBL High Throughput cDNA NCBI BLAST, WU-BLAST, FASTA
em_rel_htg EMBL High Throughput Genome NCBI BLAST, WU-BLAST, FASTA
em_rel_pat EMBL Patent NCBI BLAST, WU-BLAST, FASTA
em_rel_std EMBL Standard NCBI BLAST, WU-BLAST, FASTA
em_rel_sts EMBL Sequence Tagged Site NCBI BLAST, WU-BLAST, FASTA
em_rel_tpa EMBL Third Party Annotation NCBI BLAST, WU-BLAST, FASTA
emall EMBL Release and Updates NCBI BLAST, WU-BLAST, FASTA
evec EMBL Vectors NCBI BLAST, WU-BLAST, FASTA
imgtligm IMGT/LIGM-DB NCBI BLAST, WU-BLAST, FASTA
imgthla IMGT/HLA NCBI BLAST, WU-BLAST, FASTA

Parasite databases

These are the nucleotide databases you can use with our WU-BLAST web service:

DB Name Description Tools
nem Nematoda WU-BLAST
fil Filarial WU-BLAST
brugia B.malayi WU-BLAST
oncv O.volvulus WU-BLAST
apicom Apicomplexa WU-BLAST
plas Plasmodium WU-BLAST
plasf P.falciparum WU-BLAST
toxo T.gondii WU-BLAST
crypto C.parvum WU-BLAST
eimeria Eimeria WU-BLAST
kineto Kinetoplastids WU-BLAST
schisto Schistosoma WU-BLAST
schunq Schisto unique WU-BLAST
mansoni S.mansoni WU-BLAST
jap S.japonicum WU-BLAST
cercunq Cerc unique WU-BLAST
japunq Jap unique WU-BLAST
entamoeba entamoeba WU-BLAST
bgESTnr bgESTnr WU-BLAST

ASD databases

The Alternative Splicing Database (ASD) is a database of alternatively spliced exons.

Note: the Alternative Splicing Database (ASD) and the Alternative Transcript Diversity database (ATD) have been merged into a single resource: the Alternative Splicing and Transcript Diversity database (ASTD). You may wish to use the ASTD databases instead of these.

DB Name Description Tools
altsgen Splice Genes WU-BLAST
altsiso Splice Patterns WU-BLAST
aedb AEDB exons WU-BLAST
apdb Peptides WU-BLAST

ASTD databases

The Alternative Splicing and Transcript Diversity database (ASTD) merges the Alternative Splicing Database (ASD) and Alternative Transcript Diversity database (ATD) into a single resource.

DB Name Description Tools
astdi ASTD Isoforms WU-BLAST
astdg ASTD Gene WU-BLAST
astdp ASTD Peptides WU-BLAST

LGIC databases

Ligand Gated Ion Channel Database.

DB Name Description Tools
lgicp Ligand Gated Ion Channel Database Protein FASTA
lgicn Ligand Gated Ion Channel Database Nucleotide FASTA

Fasta full proteomes

WSFasta provides sequence similarity searching against complete proteomes databases.

dbname Description Tools
22426.A_gambiae-pAnopheles gambiae Fasta
3.A_thaliana-pArabidopsis thaliana Fasta
982.A_gossypii-pAshbya gossypii Fasta
22118.A_fumigatus-pAspergillus fumigatus Fasta
23077.A_oryzae-pAspergillus oryzae Fasta
20721.B_rerio-pBrachydanio rerio Fasta
21633.C_briggsae-pCaenorhabditis briggsae Fasta
9.C_elegans-pCaenorhabditis elegans Fasta
19665.C_glabrata-pCandida glabrata Fasta
20846.C_neoformans_JEC21-pCryptococcus neoformans JEC21 Fasta
21380.C_neoformans-pCryptococcus neoformans var. neoformans B-3501A Fasta
23132.C_hominis-pCryptosporidium hominis Fasta
20018.D_hansenii-pDebaryomyces hansenii Fasta
21395.D_discoideum-pDictyostelium discoideum Fasta
17.D_melanogaster-pDrosophila melanogaster Fasta
25396.D_pseudoobscura-pDrosophila pseudoobscura Fasta
79.E_cuniculi-pEncephalitozoon cuniculi Fasta
21457.G_gallus-pGallus gallus Fasta
22027.G_zeae-pGibberella zeae Fasta
55.G_theta-pGuillardia theta Fasta
25.H_sapiens-pHomo sapiens Fasta
20004.K_lactis-pKluyveromyces lactis Fasta
21780.L_major-pLeishmania major Fasta
59.M_musculus-pMus musculus Fasta
20026.P_tetraurelia-pParamecium tetraurelia Fasta
493.P_falciparum_3D7-pPlasmodium falciparum 3D7 Fasta
21631.P_yoelii-pPlasmodium yoelii yoelii Fasta
122.R_norvegicus-pRattus norvegicus Fasta
40.S_cerevisiae-pSaccharomyces cerevisiae Fasta
78.S_pombe-pSchizosaccharomyces pombe Fasta
22388.T_nigroviridis-pTetraodon nigroviridis Fasta
23057.T_annulata-pTheileria annulata Fasta
23052.T_parva-pTheileria parva Fasta
23182.T_gondii-pToxoplasma gondii Fasta
20011.Y_lipolytica-pYarrowia lipolytica Fasta
23160.A_bacterium-pAcidobacteria bacterium Fasta
19622.Acinetobacter_sp-pAcinetobacter sp. Fasta
62.A_tumefaciens_Cereon-pAgrobacterium tumefaciens Cereon Fasta
73.A_tumefaciens_Dupont-pAgrobacterium tumefaciens Dupont Fasta
25433.A_borkumensis-pAlcanivorax borkumensis Fasta
71.Anabaena_sp-pAnabaena sp. Fasta
22186.A_variabilis-pAnabaena variabilis Fasta
22582.A_dehalogenans-pAnaeromyxobacter dehalogenans Fasta
20704.A_marginale-pAnaplasma marginale Fasta
22967.A_phagocytophilum-pAnaplasma phagocytophilum Fasta
2.A_aeolicus-pAquifex aeolicus Fasta
22578.A_yellows-pAster yellows witches'-broom phytoplasma Fasta
20640.Azoarcus_sp-pAzoarcus sp. Fasta
136.B_anthracis_Ames-pBacillus anthracis Ames Fasta
1642.B_anthracis_Ames_ancestor-pBacillus anthracis Ames ancestor Fasta
20000.B_anthracis_Sterne-pBacillus anthracis Sterne Fasta
902.B_cereus_ATCC_10987-pBacillus cereus ATCC 10987 Fasta
134.B_cereus_ATCC_14579-pBacillus cereus ATCC 14579 Fasta
20340.B_cereus_ZK-pBacillus cereus ZK Fasta
20483.B_clausii-pBacillus clausii Fasta
5.B_halodurans-pBacillus halodurans Fasta
20380.B_licheniformis_Goettingen-pBacillus licheniformis Goettingen Fasta
20360.B_licheniformis_Novozymes-pBacillus licheniformis Novozymes Fasta
6.B_subtilis-pBacillus subtilis Fasta
20002.B_thuringiensis-pBacillus thuringiensis konkukian Fasta
21185.B_fragilis_ATCC_25285-pBacteroides fragilis ATCC 25285 Fasta
20362.B_fragilis_YCH46-pBacteroides fragilis YCH46 Fasta
127.B_thetaiotaomicron-pBacteroides thetaiotaomicron Fasta
19663.B_henselae-pBartonella henselae Fasta
19588.B_quintana-pBartonella quintana Fasta
23144.B_cicadellinicola-pBaumannia cicadellinicola Fasta
662.B_bacteriovorus-pBdellovibrio bacteriovorus Fasta
99.B_longum-pBifidobacterium longum Fasta
142.B_floridanus-pBlochmannia floridanus Fasta
22009.B_pennsylvanicus-pBlochmannia pennsylvanicus Fasta
22586.B_avium-pBordetella avium Fasta
143.B_bronchiseptica-pBordetella bronchiseptica Fasta
144.B_parapertussis-pBordetella parapertussis Fasta
145.B_pertussis-pBordetella pertussis Fasta
25460.B_afzelii-pBorrelia afzelii PKo Fasta
7.B_burgdorferi-pBorrelia burgdorferi Fasta
20260.B_garinii-pBorrelia garinii Fasta
112.B_japonicum-pBradyrhizobium japonicum Fasta
22482.B_abortus-pBrucella abortus Fasta
21680.B_abortus_1-pBrucella abortus 1 Fasta
74.B_melitensis-pBrucella melitensis Fasta
100.B_suis-pBrucella suis Fasta
8.B_aphidicola_Acyrthosiphon_pisum-pBuchnera aphidicola Acyrthosiphon pisum Fasta
92.B_aphidicola_Schizaphis-pBuchnera aphidicola graminum Schizaphis Fasta
116.B_aphidicola_Baizongia-pBuchnera aphidicola pistaciae Baizongia Fasta
23339.B_cenocepacia-pBurkholderia cenocepacia Fasta
20541.B_mallei-pBurkholderia mallei Fasta
22243.B_pseudomallei_1710b-pBurkholderia pseudomallei 1710b Fasta
20343.B_pseudomallei_K96243-pBurkholderia pseudomallei K96243 Fasta
22343.Burkholderia_sp-pBurkholderia sp. Fasta
22520.B_thailandensis-pBurkholderia thailandensis Fasta
25388.B_xenovorans-pBurkholderia xenovorans Fasta
20886.C_jejuni-pCampylobacter jejuni Fasta
10.C_jejuni_O-2-pCampylobacter jejuni O:2 Fasta
22347.C_hydrogenoformans-pCarboxydothermus hydrogenoformans Fasta
48.C_crescentus-pCaulobacter crescentus Fasta
11.C_muridarum-pChlamydia muridarum Fasta
12.C_pneumoniae_AR39-pChlamydia pneumoniae AR39 Fasta
13.C_pneumoniae_CWL029-pChlamydia pneumoniae CWL029 Fasta
14.C_pneumoniae_J138-pChlamydia pneumoniae J138 Fasta
141.C_pneumoniae_TW-183-pChlamydia pneumoniae TW-183 Fasta
22183.C_trachomatis_A-HAR-13-pChlamydia trachomatis A/HAR-13 Fasta
15.C_trachomatis_D-UW-3-Cx-pChlamydia trachomatis D/UW-3/Cx Fasta
21280.C_abortus-pChlamydophila abortus Fasta
135.C_caviae-pChlamydophila caviae Fasta
23011.C_felis-pChlamydophila felis Fasta
22390.C_chlorochromatii-pChlorobium chlorochromatii Fasta
91.C_tepidum-pChlorobium tepidum Fasta
153.C_violaceum-pChromobacterium violaceum Fasta
23124.C_salexigens-pChromohalobacter salexigens Fasta
61.C_acetobutylicum-pClostridium acetobutylicum Fasta
25374.C_difficile-pClostridium difficile 630 Fasta
75.C_perfringens_13-pClostridium perfringens 13 Fasta
25435.C_perfringens_ATCC_13124-pClostridium perfringens ATCC 13124 Fasta
25437.C_perfringens-pClostridium perfringens SM101 Fasta
119.C_tetani-pClostridium tetani Fasta
21940.C_psychrerythraea-pColwellia psychrerythraea Fasta
328.C_diphtheriae-pCorynebacterium diphtheriae Fasta
107.C_efficiens-pCorynebacterium efficiens Fasta
786.C_glutamicum_Kalinowski-pCorynebacterium glutamicum Kalinowski Fasta
785.C_glutamicum_Nakagawa-pCorynebacterium glutamicum Nakagawa Fasta
21844.C_jeikeium-pCorynebacterium jeikeium Fasta
130.C_burnetii-pCoxiella burnetii Fasta
25411.C_hutchinsonii-pCytophaga hutchinsonii ATCC 33406 Fasta
22011.D_aromatica-pDechloromonas aromatica Fasta
22080.D_ethenogenes-pDehalococcoides ethenogenes Fasta
22060.Dehalococcoides_sp-pDehalococcoides sp. Fasta
23158.D_geothermalis-pDeinococcus geothermalis Fasta
16.D_radiodurans-pDeinococcus radiodurans Fasta
23013.D_hafniense-pDesulfitobacterium hafniense Fasta
20120.D_psychrophila-pDesulfotalea psychrophila Fasta
22394.D_desulfuricans-pDesulfovibrio desulfuricans Fasta
1444.D_vulgaris-pDesulfovibrio vulgaris Fasta
22066.E_canis-pEhrlichia canis Fasta
22833.E_chaffeensis-pEhrlichia chaffeensis Fasta
21080.E_ruminantium_ARC-OVI-pEhrlichia ruminantium ARC-OVI Fasta
20820.E_ruminantium_CIRAD-pEhrlichia ruminantium CIRAD Fasta
21001.E_ruminantium_Gardel-pEhrlichia ruminantium Gardel Fasta
128.E_faecalis-pEnterococcus faecalis Fasta
19682.E_carotovora-pErwinia carotovora Fasta
22580.E_litoralis-pErythrobacter litoralis HTCC2594 Fasta
19.E_coli_EDL933-pEscherichia coli EDL933 Fasta
18.E_coli_K12-pEscherichia coli K12 Fasta
110.E_coli_UPEC-pEscherichia coli O6 UPEC Fasta
25405.E_coli_536-pEscherichia coli O6:K15:H31 536 Fasta
20.E_coli_Sakai-pEscherichia coli Sakai Fasta
23099.E_coli_UTI89-pEscherichia coli UTI89 Fasta
22574.E_coli_W3110-pEscherichia coli W3110 Fasta
25409.F_tularensis_FSC_198_tularensis-pFrancisella tularensis FSC 198 tularensis Fasta
22969.F_tularensis_holarctica-pFrancisella tularensis holarctica Fasta
20762.F_tularensis-pFrancisella tularensis tularensis Fasta
22594.Frankia_sp-pFrankia sp. Fasta
83.F_nucleatum-pFusobacterium nucleatum nucleatum Fasta
20702.G_kaustophilus-pGeobacillus kaustophilus Fasta
22396.G_metallireducens-pGeobacter metallireducens Fasta
594.G_sulfurreducens-pGeobacter sulfurreducens Fasta
154.G_violaceus-pGloeobacter violaceus Fasta
20920.G_oxydans-pGluconobacter oxydans Fasta
150.H_ducreyi-pHaemophilus ducreyi Fasta
21810.H_influenzae_86-028NP-pHaemophilus influenzae 86-028NP Fasta
21.H_influenzae_ATCC_51907-pHaemophilus influenzae ATCC 51907 Fasta
22516.H_chejuensis-pHahella chejuensis Fasta
139.H_hepaticus-pHelicobacter hepaticus Fasta
23.H_pylori_26695-pHelicobacter pylori 26695 Fasta
23349.H_pylori_HPAG1-pHelicobacter pylori HPAG1 Fasta
24.H_pylori_J99-pHelicobacter pylori J99 Fasta
20700.I_loihiensis-pIdiomarina loihiensis Fasta
22965.Jannaschia_sp-pJannaschia sp. Fasta
20940.L_acidophilus-pLactobacillus acidophilus Fasta
23189.L_delbrueckii-pLactobacillus delbrueckii Fasta
699.L_johnsonii-pLactobacillus johnsonii Fasta
117.L_plantarum-pLactobacillus plantarum Fasta
22363.L_sakei-pLactobacillus sakei Fasta
23050.L_salivarius-pLactobacillus salivarius Fasta
26.L_lactis-pLactococcus lactis Fasta
23156.L_intracellularis-pLawsonia intracellularis Fasta
20840.L_pneumophila_Lens-pLegionella pneumophila Lens Fasta
20442.L_pneumophila_Paris-pLegionella pneumophila Paris Fasta
20420.L_pneumophila_Philadelphia_1-pLegionella pneumophila Philadelphia 1 Fasta
20160.L_xyli-pLeifsonia xyli xyli Fasta
1122.L_interrogans_Icterohaemorrhagiae-pLeptospira interrogans copenhageni Icterohaemorrhagiae Fasta
104.L_interrogans_lai-pLeptospira interrogans lai Fasta
67.L_innocua-pListeria innocua Fasta
68.L_monocytogenes_1-2a-pListeria monocytogenes 1/2a Fasta
1563.L_monocytogenes_4b-pListeria monocytogenes 4b Fasta
22510.M_magneticum-pMagnetospirillum magneticum Fasta
20364.M_succiniciproducens-pMannheimia succiniciproducens Fasta
20108.M_florum-pMesoplasma florum Fasta
25407.Mesorhizobium_sp-pMesorhizobium sp. Fasta
23191.M_flagellatus-pMethylobacillus flagellatus Fasta
20445.M_capsulatus-pMethylococcus capsulatus Fasta
22518.M_thermoacetica-pMoorella thermoacetica Fasta
138.M_bovis-pMycobacterium bovis Fasta
29.M_leprae-pMycobacterium leprae Fasta
679.M_paratuberculosis-pMycobacterium paratuberculosis Fasta
25058.M_sp-pMycobacterium sp. MCS Fasta
30.M_tuberculosis_ATCC_25618-pMycobacterium tuberculosis ATCC 25618 Fasta
53.M_tuberculosis_Oshkosh-pMycobacterium tuberculosis Oshkosh Fasta
22508.M_capricolum-pMycoplasma capricolum Fasta
137.M_gallisepticum-pMycoplasma gallisepticum Fasta
31.M_genitalium-pMycoplasma genitalium Fasta
20440.M_hyopneumoniae_232-pMycoplasma hyopneumoniae 232 Fasta
22020.M_hyopneumoniae_7448-pMycoplasma hyopneumoniae 7448 Fasta
22003.M_hyopneumoniae_J-pMycoplasma hyopneumoniae J Fasta
3315.M_mobile-pMycoplasma mobile Fasta
762.M_mycoides-pMycoplasma mycoides SC Fasta
108.M_penetrans-pMycoplasma penetrans Fasta
32.M_pneumoniae-pMycoplasma pneumoniae Fasta
52.M_pulmonis-pMycoplasma pulmonis Fasta
22005.M_synoviae-pMycoplasma synoviae Fasta
23351.M_xanthus-pMyxococcus xanthus Fasta
21062.N_gonorrhoeae-pNeisseria gonorrhoeae Fasta
33.N_meningitidis_A-pNeisseria meningitidis A Fasta
34.N_meningitidis-pNeisseria meningitidis B Fasta
22831.N_sennetsu-pNeorickettsia sennetsu Fasta
23122.N_hamburgensis-pNitrobacter hamburgensis Fasta
22168.N_winogradskyi-pNitrobacter winogradskyi Fasta
22304.N_oceani-pNitrosococcus oceani Fasta
133.N_europaea-pNitrosomonas europaea Fasta
22443.N_multiformis-pNitrosospira multiformis Fasta
20447.N_farcinica-pNocardia farcinica Fasta
22600.N_aromaticivorans-pNovosphingobium aromaticivorans Fasta
97.O_iheyensis-pOceanobacillus iheyensis Fasta
659.O_yellows-pOnion yellows phytoplasma Fasta
1242.Parachlamydia_sp-pParachlamydia sp. Fasta
35.P_multocida-pPasteurella multocida Fasta
21920.P_ubique-pPelagibacter ubique Fasta
22323.P_carbinolicus-pPelobacter carbinolicus Fasta
22392.P_luteolum-pPelodictyon luteolum Fasta
1462.P_profundum-pPhotobacterium profundum Fasta
155.P_luminescens-pPhotorhabdus luminescens laumondii Fasta
25386.P_sp-pPolaromonas sp. JS666 Fasta
152.P_gingivalis-pPorphyromonas gingivalis Fasta
140.P_marinus_CCMP_1375-pProchlorococcus marinus CCMP 1375 Fasta
147.P_marinus_CCMP_1378-pProchlorococcus marinus CCMP 1378 Fasta
22424.P_marinus_MIT_9312-pProchlorococcus marinus MIT 9312 Fasta
148.P_marinus_MIT_9313-pProchlorococcus marinus MIT 9313 Fasta
22194.P_marinus_NATL2A-pProchlorococcus marinus NATL2A Fasta
20122.P_acnes-pPropionibacterium acnes Fasta
25380.P_atlantica-pPseudoalteromonas atlantica T6c Fasta
22225.P_haloplanktis-pPseudoalteromonas haloplanktis Fasta
36.P_aeruginosa-pPseudomonas aeruginosa Fasta
21840.P_fluorescens_Pf-5-pPseudomonas fluorescens Pf-5 Fasta
22325.P_fluorescens_PfO-1-pPseudomonas fluorescens PfO-1 Fasta
109.P_putida-pPseudomonas putida Fasta
22013.P_syringae_phaseolicola-pPseudomonas syringae phaseolicola Fasta
21635.P_syringae_syringae-pPseudomonas syringae syringae Fasta
126.P_syringae_tomato-pPseudomonas syringae tomato Fasta
21900.P_arcticum-pPsychrobacter arcticum Fasta
23126.P_cryohalolentis-pPsychrobacter cryohalolentis Fasta
22196.R_eutropha-pRalstonia eutropha Fasta
23146.R_metallidurans-pRalstonia metallidurans Fasta
72.R_solanacearum-pRalstonia solanacearum Fasta
22584.R_etli-pRhizobium etli Fasta
23148.R_leguminosarum-pRhizobium leguminosarum bv. viciae Fasta
54.R_loti-pRhizobium loti Fasta
58.R_meliloti-pRhizobium meliloti Fasta
22306.R_sphaeroides-pRhodobacter sphaeroides Fasta
25456.Rhodococcus_sp-pRhodococcus sp. Fasta
23009.R_ferrireducens-pRhodoferax ferrireducens Fasta
149.R_baltica-pRhodopirellula baltica Fasta
557.R_palustris_ATCC_BAA-98-pRhodopseudomonas palustris ATCC BAA-98 Fasta
23030.R_palustris_BisB18-pRhodopseudomonas palustris BisB18 Fasta
25391.R_palustris_BisB5-pRhodopseudomonas palustris BisB5 Fasta
22588.R_palustris_HaA2-pRhodopseudomonas palustris HaA2 Fasta
22512.R_rubrum-pRhodospirillum rubrum Fasta
23097.R_bellii-pRickettsia bellii Fasta
65.R_conorii-pRickettsia conorii Fasta
21720.R_felis-pRickettsia felis Fasta
39.R_prowazekii-pRickettsia prowazekii Fasta
20220.R_typhi-pRickettsia typhi Fasta
25335.R_denitrificans-pRoseobacter denitrificans Fasta
25050.R_xylanophilus-pRubrobacter xylanophilus Fasta
23018.S_degradans-pSaccharophagus degradans Fasta
22539.S_ruber-pSalinibacter ruber Fasta
21321.S_choleraesuis-pSalmonella choleraesuis Fasta
20962.S_paratyphi-a-pSalmonella paratyphi-a Fasta
129.S_typhi_ATCC_700931-pSalmonella typhi ATCC 700931 Fasta
70.S_typhi_CT18-pSalmonella typhi CT18 Fasta
69.S_typhimurium-pSalmonella typhimurium Fasta
25384.S_denitrificans-pShewanella denitrificans OS217 Fasta
106.S_oneidensis-pShewanella oneidensis Fasta
22433.S_boydii-pShigella boydii Fasta
22435.S_dysenteriae-pShigella dysenteriae Fasta
132.S_flexneri_2457T-pShigella flexneri 2457T Fasta
103.S_flexneri_301-pShigella flexneri 301 Fasta
22108.S_sonnei-pShigella sonnei Fasta
20780.S_pomeroyi-pSilicibacter pomeroyi Fasta
23193.Silicibacter_sp-pSilicibacter sp. Fasta
22572.S_glossinidius-pSodalis glossinidius Fasta
23185.S_alaskensis-pSphingopyxis alaskensis Fasta
20863.S_aureus_COL-pStaphylococcus aureus COL Fasta
19583.S_aureus_MRSA252-pStaphylococcus aureus MRSA252 Fasta
19585.S_aureus_MSSA476-pStaphylococcus aureus MSSA476 Fasta
86.S_aureus_MW2-pStaphylococcus aureus MW2 Fasta
51.S_aureus_Mu50-pStaphylococcus aureus Mu50 Fasta
50.S_aureus_N315-pStaphylococcus aureus N315 Fasta
22608.S_aureus_NCTC_8325-pStaphylococcus aureus NCTC 8325 Fasta
22602.S_aureus_USA300-pStaphylococcus aureus USA300 Fasta
22485.S_aureus_bovine_RF122-pStaphylococcus aureus bovine RF122 Fasta
113.S_epidermidis_ATCC_12228-pStaphylococcus epidermidis ATCC 12228 Fasta
20865.S_epidermidis_ATCC_35984-pStaphylococcus epidermidis ATCC 35984 Fasta
21825.S_haemolyticus-pStaphylococcus haemolyticus Fasta
22064.S_saprophyticus-pStaphylococcus saprophyticus Fasta
98.S_agalactiae-pStreptococcus agalactiae III Fasta
22229.S_agalactiae_Ia-pStreptococcus agalactiae Ia Fasta
95.S_agalactiae_V-pStreptococcus agalactiae V Fasta
102.S_mutans-pStreptococcus mutans Fasta
64.S_pneumoniae_ATCC_BAA-255-pStreptococcus pneumoniae ATCC BAA-255 Fasta
57.S_pneumoniae_TIGR4-pStreptococcus pneumoniae TIGR4 Fasta
22007.S_pyogenes_MGAS5005-pStreptococcus pyogenes M1 MGAS5005 Fasta
49.S_pyogenes_SF370-pStreptococcus pyogenes M1 SF370 Fasta
80.S_pyogenes_MGAS8232-pStreptococcus pyogenes M18 MGAS8232 Fasta
21980.S_pyogenes_MGAS6180-pStreptococcus pyogenes M28 MGAS6180 Fasta
93.S_pyogenes_ATCC_BAA-595-pStreptococcus pyogenes M3 ATCC BAA-595 Fasta
125.S_pyogenes_SSI-1-pStreptococcus pyogenes M3 SSI-1 Fasta
20460.S_pyogenes_ATCC_BAA-946-pStreptococcus pyogenes M6 ATCC BAA-946 Fasta
23168.S_pyogenes_MGAS10270-pStreptococcus pyogenes MGAS10270 Fasta
23164.S_pyogenes_MGAS10750-pStreptococcus pyogenes MGAS10750 Fasta
23166.S_pyogenes_MGAS2096-pStreptococcus pyogenes MGAS2096 Fasta
23162.S_pyogenes_MGAS9429-pStreptococcus pyogenes MGAS9429 Fasta
20662.S_thermophilus_ATCC_BAA-250-pStreptococcus thermophilus ATCC BAA-250 Fasta
20664.S_thermophilus_CNRZ_1066-pStreptococcus thermophilus CNRZ 1066 Fasta
131.S_avermitilis-pStreptomyces avermitilis Fasta
84.S_coelicolor-pStreptomyces coelicolor Fasta
20300.S_thermophilum-pSymbiobacterium thermophilum Fasta
96.S_elongatus-pSynechococcus elongatus Fasta
20800.Synechococcus_sp_ATCC_27144-pSynechococcus sp. ATCC 27144 Fasta
22398.Synechococcus_sp_CC9605-pSynechococcus sp. CC9605 Fasta
22400.Synechococcus_sp_CC9902-pSynechococcus sp. CC9902 Fasta
22596.Synechococcus_sp_JA-2-3Ba2-13-pSynechococcus sp. JA-2-3B'a(2-13) Fasta
22598.Synechococcus_sp_JA-3-3Ab-pSynechococcus sp. JA-3-3Ab Fasta
22437.Synechococcus_sp_PCC_7942-pSynechococcus sp. PCC 7942 Fasta
146.Synechococcus_sp_WH8102-pSynechococcus sp. WH8102 Fasta
41.Synechocystis_sp-pSynechocystis sp. Fasta
22576.S_aciditrophicus-pSyntrophus aciditrophicus Fasta
85.T_tengcongensis-pThermoanaerobacter tengcongensis Fasta
22062.T_fusca-pThermobifida fusca Fasta
43.T_maritima-pThermotoga maritima Fasta
1244.T_thermophilus_HB27-pThermus thermophilus HB27 Fasta
20981.T_thermophilus_HB8-pThermus thermophilus HB8 Fasta
22106.T_denitrificans_ATCC_25259-pThiobacillus denitrificans ATCC 25259 Fasta
22402.T_crunogena-pThiomicrospira crunogena Fasta
22422.T_denitrificans_ATCC_33889-pThiomicrospira denitrificans ATCC 33889 Fasta
742.T_denticola-pTreponema denticola Fasta
44.T_pallidum-pTreponema pallidum Fasta
25399.T_erythraeum-pTrichodesmium erythraeum IMS101 Fasta
120.T_whipplei_TW08-27-pTropheryma whipplei TW08/27 Fasta
121.T_whipplei_Twist-pTropheryma whipplei Twist Fasta
45.U_parvum-pUreaplasma parvum Fasta
46.V_cholerae-pVibrio cholerae Fasta
21222.V_fischeri-pVibrio fischeri Fasta
124.V_parahaemolyticus-pVibrio parahaemolyticus Fasta
111.V_vulnificus_CMCP6-pVibrio vulnificus CMCP6 Fasta
156.V_vulnificus_YJ016-pVibrio vulnificus YJ016 Fasta
101.W_glossinidia-pWigglesworthia glossinidia brevipalpis Fasta
765.W_pipientis-pWolbachia pipientis wMel Fasta
21004.Wolbachia_sp-pWolbachia sp. Fasta
151.W_succinogenes-pWolinella succinogenes Fasta
88.X_axonopodis-pXanthomonas axonopodis citri Fasta
21700.X_campestris_8004-pXanthomonas campestris 8004 Fasta
22365.X_campestris_85-10-pXanthomonas campestris 85-10 Fasta
87.X_campestris_ATCC_33913-pXanthomonas campestris campestris ATCC 33913 Fasta
21006.X_oryzae-pXanthomonas oryzae oryzae Fasta
22542.X_oryzae_oryzae-pXanthomonas oryzae oryzae Fasta
47.X_fastidiosa_9a5c-pXylella fastidiosa 9a5c Fasta
118.X_fastidiosa_Temecula1-pXylella fastidiosa Temecula1 Fasta
1113.Y_pestis_91001-pYersinia pestis 91001 Fasta
25054.Y_pestis_Antiqua-pYersinia pestis Antiqua Fasta
66.Y_pestis_CO-92-pYersinia pestis CO-92 Fasta
94.Y_pestis_KIM5-pYersinia pestis KIM5 Fasta
25056.Y_pestis_Nepal516-pYersinia pestis Nepal516 Fasta
20262.Y_pseudotuberculosis-pYersinia pseudotuberculosis Fasta
20760.Z_mobilis-pZymomonas mobilis Fasta
1.A_pernix-pAeropyrum pernix Fasta
4.A_fulgidus-pArchaeoglobus fulgidus Fasta
20560.H_marismortui-pHaloarcula marismortui Fasta
22.H_salinarium-pHalobacterium salinarium Fasta
25333.H_walsbyi-pHaloquadratum walsbyi Fasta
27.M_thermoautotrophicum-pMethanobacterium thermoautotrophicum Fasta
25376.M_burtonii-pMethanococcoides burtonii Fasta
28.M_jannaschii-pMethanococcus jannaschii Fasta
942.M_maripaludis-pMethanococcus maripaludis Fasta
81.M_kandleri-pMethanopyrus kandleri Fasta
82.M_acetivorans-pMethanosarcina acetivorans Fasta
22190.M_barkeri-pMethanosarcina barkeri Fasta
89.M_mazei-pMethanosarcina mazei Fasta
22544.M_stadtmanae-pMethanosphaera stadtmanae Fasta
22610.M_hungatei-pMethanospirillum hungatei Fasta
597.N_equitans-pNanoarchaeum equitans Fasta
22223.N_pharaonis-pNatronomonas pharaonis Fasta
12842.P_torridus-pPicrophilus torridus Fasta
76.P_aerophilum-pPyrobaculum aerophilum Fasta
37.P_abyssi-pPyrococcus abyssi Fasta
77.P_furiosus-pPyrococcus furiosus Fasta
38.P_horikoshii-pPyrococcus horikoshii Fasta
21106.P_kodakaraensis-pPyrococcus kodakaraensis Fasta
21860.S_acidocaldarius-pSulfolobus acidocaldarius Fasta
56.S_solfataricus-pSulfolobus solfataricus Fasta
63.S_tokodaii-pSulfolobus tokodaii Fasta
42.T_acidophilum-pThermoplasma acidophilum Fasta
60.T_volcanium-pThermoplasma volcanium Fasta

Fasta full genomes

WSFasta provides sequence similarity searching against complete genomes databases.

dbname Description Tools
3702-gEuk Arabidopsis thalianaFasta
284811-gEuk Ashbya gossypii ATCC 10895Fasta
330879-gEuk Aspergillus fumigatus Af293Fasta
5061-gEuk Aspergillus nigerFasta
6239-gEuk Caenorhabditis elegansFasta
284593-gEuk Candida glabrata CBS 138Fasta
9615-gEuk Canis familiarisFasta
283643-gEuk Cryptococcus neoformans var. neoformans B-3501AFasta
214684-gEuk Cryptococcus neoformans var. neoformans JEC21Fasta
5807-gEuk Cryptosporidium parvumFasta
45157-gEuk Cyanidioschyzon merolaeFasta
284592-gEuk Debaryomyces hansenii CBS767Fasta
352472-gEuk Dictyostelium discoideum AX4Fasta
7227-gEuk Drosophila melanogasterFasta
7237-gEuk Drosophila pseudoobscuraFasta
284813-gEuk Encephalitozoon cuniculi GB-M1Fasta
9031-gEuk Gallus gallusFasta
284590-gEuk Kluyveromyces lactis NRRL Y-1140Fasta
5664-gEuk Leishmania majorFasta
347515-gEuk Leishmania major strain FriedlinFasta
39947-gEuk Oryza sativa (japonica cultivar-group)Fasta
9598-gEuk Pan troglodytesFasta
5888-gEuk Paramecium tetraureliaFasta
322104-gEuk Pichia stipitis CBS 6054Fasta
36329-gEuk Plasmodium falciparum 3D7Fasta
10116-gEuk Rattus norvegicusFasta
4932-gEuk Saccharomyces cerevisiaeFasta
284812-gEuk Schizosaccharomyces pombe 972h-Fasta
5811-gEuk Toxoplasma gondiiFasta
383379-gEuk Toxoplasma gondii RHFasta
5691-gEuk Trypanosoma bruceiFasta
284591-gEuk Yarrowia lipolytica CLIB122Fasta
272557-gArc Aeropyrum pernix K1Fasta
224325-gArc Archaeoglobus fulgidus DSM 4304Fasta
46770-gArc Cenarchaeum symbiosumFasta
272569-gArc Haloarcula marismortui ATCC 43049Fasta
64091-gArc Halobacterium sp. NRC-1Fasta
293091-gArc Haloquadratum walsbyiFasta
415426-gArc Hyperthermus butylicus DSM 5456Fasta
243232-gArc Methanocaldococcus jannaschii DSM 2661Fasta
259564-gArc Methanococcoides burtonii DSM 6242Fasta
39152-gArc Methanococcus maripaludisFasta
410358-gArc Methanocorpusculum labreanum ZFasta
368407-gArc Methanoculleus marisnigri JR1Fasta
190192-gArc Methanopyrus kandleri AV19Fasta
349307-gArc Methanosaeta thermophila PTFasta
188937-gArc Methanosarcina acetivorans C2AFasta
269797-gArc Methanosarcina barkeri str. FusaroFasta
192952-gArc Methanosarcina mazei Go1Fasta
339860-gArc Methanosphaera stadtmanae DSM 3091Fasta
323259-gArc Methanospirillum hungatei JF-1Fasta
187420-gArc Methanothermobacter thermautotrophicus str. Delta HFasta
228908-gArc Nanoarchaeum equitans Kin4-MFasta
348780-gArc Natronomonas pharaonis DSM 2160Fasta
263820-gArc Picrophilus torridus DSM 9790Fasta
13773-gArc Pyrobaculum aerophilumFasta
410359-gArc Pyrobaculum calidifontis JCM 11548Fasta
384616-gArc Pyrobaculum islandicum DSM 4184Fasta
272844-gArc Pyrococcus abyssi GE5Fasta
186497-gArc Pyrococcus furiosus DSM 3638Fasta
70601-gArc Pyrococcus horikoshii OT3Fasta
399550-gArc Staphylothermus marinus F1Fasta
330779-gArc Sulfolobus acidocaldarius DSM 639Fasta
2287-gArc Sulfolobus solfataricusFasta
273063-gArc Sulfolobus tokodaii str. 7Fasta
69014-gArc Thermococcus kodakarensis KOD1Fasta
368408-gArc Thermofilum pendens Hrk 5Fasta
273075-gArc Thermoplasma acidophilum DSM 1728Fasta
273116-gArc Thermoplasma volcanium GSS1Fasta
351160-gArc uncultured methanogenic archaeon RC-IFasta
204669-gBac Acidobacteria bacterium Ellin345Fasta
351607-gBac Acidothermus cellulolyticus 11BFasta
397945-gBac Acidovorax avenae subsp. citrulli AAC00-1Fasta
232721-gBac Acidovorax sp. JS42Fasta
400667-gBac Acinetobacter baumannii ATCC 17978Fasta
62977-gBac Acinetobacter sp. ADP1Fasta
416269-gBac Actinobacillus pleuropneumoniae L20Fasta
380703-gBac Aeromonas hydrophila subsp. hydrophila ATCC 7966Fasta
176299-gBac Agrobacterium tumefaciens str. C58Fasta
393595-gBac Alcanivorax borkumensis SK2Fasta
187272-gBac Alkalilimnicola ehrlichei MLHE-1Fasta
240292-gBac Anabaena variabilis ATCC 29413Fasta
290397-gBac Anaeromyxobacter dehalogenans 2CP-CFasta
234826-gBac Anaplasma marginale str. St. MariesFasta
212042-gBac Anaplasma phagocytophilum HZFasta
224324-gBac Aquifex aeolicus VF5Fasta
290340-gBac Arthrobacter aurescens TC1Fasta
290399-gBac Arthrobacter sp. FB24Fasta
322098-gBac Aster yellows witches'-broom phytoplasma AYWBFasta
62928-gBac Azoarcus sp. BH72Fasta
76114-gBac Azoarcus sp. EbN1Fasta
261594-gBac Bacillus anthracis str. 'Ames Ancestor'Fasta
198094-gBac Bacillus anthracis str. AmesFasta
260799-gBac Bacillus anthracis str. SterneFasta
222523-gBac Bacillus cereus ATCC 10987Fasta
226900-gBac Bacillus cereus ATCC 14579Fasta
288681-gBac Bacillus cereus E33LFasta
66692-gBac Bacillus clausii KSM-K16Fasta
272558-gBac Bacillus halodurans C-125Fasta
279010-gBac Bacillus licheniformis ATCC 14580Fasta
224308-gBac Bacillus subtilis subsp. subtilis str. 168Fasta
281309-gBac Bacillus thuringiensis serovar konkukian str. 97-27Fasta
412694-gBac Bacillus thuringiensis str. Al HakamFasta
272559-gBac Bacteroides fragilis NCTC 9343Fasta
295405-gBac Bacteroides fragilis YCH46Fasta
226186-gBac Bacteroides thetaiotaomicron VPI-5482Fasta
360095-gBac Bartonella bacilliformis KC583Fasta
38323-gBac Bartonella henselaeFasta
283165-gBac Bartonella quintana str. ToulouseFasta
374463-gBac Baumannia cicadellinicola str. Hc (Homalodisca coagulata)Fasta
959-gBac Bdellovibrio bacteriovorusFasta
367928-gBac Bifidobacterium adolescentis ATCC 15703Fasta
206672-gBac Bifidobacterium longum NCC2705Fasta
360910-gBac Bordetella avium 197NFasta
518-gBac Bordetella bronchisepticaFasta
257311-gBac Bordetella parapertussis 12822Fasta
520-gBac Bordetella pertussisFasta
390236-gBac Borrelia afzelii PKoFasta
224326-gBac Borrelia burgdorferi B31Fasta
290434-gBac Borrelia garinii PBiFasta
224911-gBac Bradyrhizobium japonicum USDA 110Fasta
235-gBac Brucella abortusFasta
262698-gBac Brucella abortus biovar 1 str. 9-941Fasta
224914-gBac Brucella melitensis 16MFasta
204722-gBac Brucella suis 1330Fasta
107806-gBac Buchnera aphidicola str. APS (Acyrthosiphon pisum)Fasta
224915-gBac Buchnera aphidicola str. Bp (Baizongia pistaciae)Fasta
372461-gBac Buchnera aphidicola str. Cc (Cinara cedri)Fasta
198804-gBac Buchnera aphidicola str. Sg (Schizaphis graminum)Fasta
331271-gBac Burkholderia cenocepacia AU 1054Fasta
331272-gBac Burkholderia cenocepacia HI2424Fasta
339670-gBac Burkholderia cepacia AMMDFasta
243160-gBac Burkholderia mallei ATCC 23344Fasta
357348-gBac Burkholderia pseudomallei 1106aFasta
320372-gBac Burkholderia pseudomallei 1710bFasta
320373-gBac Burkholderia pseudomallei 668Fasta
272560-gBac Burkholderia pseudomallei K96243Fasta
269483-gBac Burkholderia sp. 383Fasta
271848-gBac Burkholderia thailandensis E264Fasta
266265-gBac Burkholderia xenovorans LB400Fasta
360106-gBac Campylobacter fetus subsp. fetus 82-40Fasta
195099-gBac Campylobacter jejuni RM1221Fasta
354242-gBac Campylobacter jejuni subsp. jejuni 81-176Fasta
192222-gBac Campylobacter jejuni subsp. jejuni NCTC 11168Fasta
203907-gBac Candidatus Blochmannia floridanusFasta
291272-gBac Candidatus Blochmannia pennsylvanicus str. BPENFasta
387662-gBac Candidatus Carsonella ruddii PVFasta
335992-gBac Candidatus Pelagibacter ubique HTCC1062Fasta
264201-gBac Candidatus Protochlamydia amoebophila UWE25Fasta
413404-gBac Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)Fasta
246194-gBac Carboxydothermus hydrogenoformans Z-2901Fasta
190650-gBac Caulobacter crescentus CB15Fasta
243161-gBac Chlamydia muridarum NiggFasta
315277-gBac Chlamydia trachomatis A/HAR-13Fasta
272561-gBac Chlamydia trachomatis D/UW-3/CXFasta
218497-gBac Chlamydophila abortus S26/3Fasta
227941-gBac Chlamydophila caviae GPICFasta
264202-gBac Chlamydophila felis Fe/C-56Fasta
115711-gBac Chlamydophila pneumoniae AR39Fasta
115713-gBac Chlamydophila pneumoniae CWL029Fasta
138677-gBac Chlamydophila pneumoniae J138Fasta
182082-gBac Chlamydophila pneumoniae TW-183Fasta
340177-gBac Chlorobium chlorochromatii CaD3Fasta
290317-gBac Chlorobium phaeobacteroides DSM 266Fasta
194439-gBac Chlorobium tepidum TLSFasta
243365-gBac Chromobacterium violaceum ATCC 12472Fasta
290398-gBac Chromohalobacter salexigens DSM 3043Fasta
272562-gBac Clostridium acetobutylicum ATCC 824Fasta
272563-gBac Clostridium difficile 630Fasta
367459-gBac Clostridium difficile QCD-32g58Fasta
386415-gBac Clostridium novyi NTFasta
195103-gBac Clostridium perfringens ATCC 13124Fasta
289380-gBac Clostridium perfringens SM101Fasta
195102-gBac Clostridium perfringens str. 13Fasta
212717-gBac Clostridium tetani E88Fasta
203119-gBac Clostridium thermocellum ATCC 27405Fasta
167879-gBac Colwellia psychrerythraea 34HFasta
257309-gBac Corynebacterium diphtheriae NCTC 13129Fasta
196164-gBac Corynebacterium efficiens YS-314Fasta
1718-gBac Corynebacterium glutamicumFasta
196627-gBac Corynebacterium glutamicum ATCC 13032Fasta
306537-gBac Corynebacterium jeikeium K411Fasta
227377-gBac Coxiella burnetii RSA 493Fasta
269798-gBac Cytophaga hutchinsonii ATCC 33406Fasta
159087-gBac Dechloromonas aromatica RCBFasta
243164-gBac Dehalococcoides ethenogenes 195Fasta
255470-gBac Dehalococcoides sp. CBDB1Fasta
319795-gBac Deinococcus geothermalis DSM 11300Fasta
243230-gBac Deinococcus radiodurans R1Fasta
138119-gBac Desulfitobacterium hafniense Y51Fasta
177439-gBac Desulfotalea psychrophila LSv54Fasta
207559-gBac Desulfovibrio desulfuricans G20Fasta
391774-gBac Desulfovibrio vulgaris subsp. vulgaris DP4Fasta
882-gBac Desulfovibrio vulgaris subsp. vulgaris str. HildenboroughFasta
269484-gBac Ehrlichia canis str. JakeFasta
205920-gBac Ehrlichia chaffeensis str. ArkansasFasta
302409-gBac Ehrlichia ruminantium str. GardelFasta
254945-gBac Ehrlichia ruminantium str. WelgevondenFasta
226185-gBac Enterococcus faecalis V583Fasta
218491-gBac Erwinia carotovora subsp. atroseptica SCRI1043Fasta
314225-gBac Erythrobacter litoralis HTCC2594Fasta
362663-gBac Escherichia coli 536Fasta
405955-gBac Escherichia coli APEC O1Fasta
199310-gBac Escherichia coli CFT073Fasta
83333-gBac Escherichia coli K12Fasta
155864-gBac Escherichia coli O157:H7 EDL933Fasta
386585-gBac Escherichia coli O157:H7 str. SakaiFasta
364106-gBac Escherichia coli UTI89Fasta
316407-gBac Escherichia coli W3110Fasta
376619-gBac Francisella tularensis subsp. holarctica LVSFasta
393011-gBac Francisella tularensis subsp. holarctica OSU18Fasta
401614-gBac Francisella tularensis subsp. novicida U112Fasta
393115-gBac Francisella tularensis subsp. tularensis FSC198Fasta
177416-gBac Francisella tularensis subsp. tularensis SCHU S4Fasta
326424-gBac Frankia alni ACN14aFasta
106370-gBac Frankia sp. CcI3Fasta
190304-gBac Fusobacterium nucleatum subsp. nucleatum ATCC 25586Fasta
235909-gBac Geobacillus kaustophilus HTA426Fasta
269799-gBac Geobacter metallireducens GS-15Fasta
243231-gBac Geobacter sulfurreducens PCAFasta
251221-gBac Gloeobacter violaceus PCC 7421Fasta
290633-gBac Gluconobacter oxydans 621HFasta
411154-gBac Gramella forsetii KT0803Fasta
391165-gBac Granulibacter bethesdensis CGDNIH1Fasta
233412-gBac Haemophilus ducreyi 35000HPFasta
281310-gBac Haemophilus influenzae 86-028NPFasta
71421-gBac Haemophilus influenzae Rd KW20Fasta
205914-gBac Haemophilus somnus 129PTFasta
349521-gBac Hahella chejuensis KCTC 2396Fasta
349124-gBac Halorhodospira halophila SL1Fasta
382638-gBac Helicobacter acinonychis str. SheebaFasta
235279-gBac Helicobacter hepaticus ATCC 51449Fasta
85962-gBac Helicobacter pylori 26695Fasta
357544-gBac Helicobacter pylori HPAG1Fasta
85963-gBac Helicobacter pylori J99Fasta
228405-gBac Hyphomonas neptunium ATCC 15444Fasta
283942-gBac Idiomarina loihiensis L2TRFasta
290400-gBac Jannaschia sp. CCS1Fasta
272621-gBac Lactobacillus acidophilus NCFMFasta
387344-gBac Lactobacillus brevis ATCC 367Fasta
321967-gBac Lactobacillus casei ATCC 334Fasta
390333-gBac Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842Fasta
321956-gBac Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365Fasta
324831-gBac Lactobacillus gasseri ATCC 33323Fasta
257314-gBac Lactobacillus johnsonii NCC 533Fasta
220668-gBac Lactobacillus plantarum WCFS1Fasta
314315-gBac Lactobacillus sakei subsp. sakei 23KFasta
362948-gBac Lactobacillus salivarius subsp. salivarius UCC118Fasta
416870-gBac Lactococcus lactis subsp. cremoris MG1363Fasta
272622-gBac Lactococcus lactis subsp. cremoris SK11Fasta
272623-gBac Lactococcus lactis subsp. lactis Il1403Fasta
363253-gBac Lawsonia intracellularis PHE/MN1-00Fasta
297245-gBac Legionella pneumophila str. LensFasta
297246-gBac Legionella pneumophila str. ParisFasta
272624-gBac Legionella pneumophila subsp. pneumophila str. Philadelphia 1Fasta
281090-gBac Leifsonia xyli subsp. xyli str. CTCB07Fasta
355277-gBac Leptospira borgpetersenii serovar Hardjo-bovis JB197Fasta
355276-gBac Leptospira borgpetersenii serovar Hardjo-bovis L550Fasta
267671-gBac Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130Fasta
189518-gBac Leptospira interrogans serovar Lai str. 56601Fasta
203120-gBac Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293Fasta
272626-gBac Listeria innocua Clip11262Fasta
169963-gBac Listeria monocytogenes EGD-eFasta
265669-gBac Listeria monocytogenes str. 4b F2365Fasta
386043-gBac Listeria welshimeri serovar 6b str. SLCC5334Fasta
156889-gBac Magnetococcus sp. MC-1Fasta
342108-gBac Magnetospirillum magneticum AMB-1Fasta
221988-gBac Mannheimia succiniciproducens MBEL55EFasta
394221-gBac Maricaulis maris MCS10Fasta
351348-gBac Marinobacter aquaeolei VT8Fasta
265311-gBac Mesoplasma florum L1Fasta
266835-gBac Mesorhizobium loti MAFF303099Fasta
266779-gBac Mesorhizobium sp. BNC1Fasta
420662-gBac Methylibium petroleiphilum PM1Fasta
265072-gBac Methylobacillus flagellatus KTFasta
243233-gBac Methylococcus capsulatus str. BathFasta
264732-gBac Moorella thermoacetica ATCC 39073Fasta
243243-gBac Mycobacterium avium 104Fasta
262316-gBac Mycobacterium avium subsp. paratuberculosis K-10Fasta
233413-gBac Mycobacterium bovis AF2122/97Fasta
410289-gBac Mycobacterium bovis BCG str. Pasteur 1173P2Fasta
272631-gBac Mycobacterium leprae TNFasta
246196-gBac Mycobacterium smegmatis str. MC2 155Fasta
164757-gBac Mycobacterium sp. JLSFasta
189918-gBac Mycobacterium sp. KMSFasta
164756-gBac Mycobacterium sp. MCSFasta
83331-gBac Mycobacterium tuberculosis CDC1551Fasta
336982-gBac Mycobacterium tuberculosis F11Fasta
83332-gBac Mycobacterium tuberculosis H37RvFasta
362242-gBac Mycobacterium ulcerans Agy99Fasta
350058-gBac Mycobacterium vanbaalenii PYR-1Fasta
340047-gBac Mycoplasma capricolum subsp. capricolum ATCC 27343Fasta
233150-gBac Mycoplasma gallisepticum RFasta
243273-gBac Mycoplasma genitalium G37Fasta
295358-gBac Mycoplasma hyopneumoniae 232Fasta
262722-gBac Mycoplasma hyopneumoniae 7448Fasta
262719-gBac Mycoplasma hyopneumoniae JFasta
267748-gBac Mycoplasma mobile 163KFasta
272632-gBac Mycoplasma mycoides subsp. mycoides SC str. PG1Fasta
272633-gBac Mycoplasma penetrans HF-2Fasta
272634-gBac Mycoplasma pneumoniae M129Fasta
272635-gBac Mycoplasma pulmonis UAB CTIPFasta
262723-gBac Mycoplasma synoviae 53Fasta
246197-gBac Myxococcus xanthus DK 1622Fasta
242231-gBac Neisseria gonorrhoeae FA 1090Fasta
272831-gBac Neisseria meningitidis FAM18Fasta
122586-gBac Neisseria meningitidis MC58Fasta
122587-gBac Neisseria meningitidis Z2491Fasta
222891-gBac Neorickettsia sennetsu str. MiyayamaFasta
323097-gBac Nitrobacter hamburgensis X14Fasta
323098-gBac Nitrobacter winogradskyi Nb-255Fasta
323261-gBac Nitrosococcus oceani ATCC 19707Fasta
228410-gBac Nitrosomonas europaea ATCC 19718Fasta
335283-gBac Nitrosomonas eutropha C91Fasta
323848-gBac Nitrosospira multiformis ATCC 25196Fasta
247156-gBac Nocardia farcinica IFM 10152Fasta
196162-gBac Nocardioides sp. JS614Fasta
103690-gBac Nostoc sp. PCC 7120Fasta
279238-gBac Novosphingobium aromaticivorans DSM 12444Fasta
221109-gBac Oceanobacillus iheyensis HTE831Fasta
203123-gBac Oenococcus oeni PSU-1Fasta
262768-gBac Onion yellows phytoplasma OY-MFasta
318586-gBac Paracoccus denitrificans PD1222Fasta
272843-gBac Pasteurella multocida subsp. multocida str. Pm70Fasta
278197-gBac Pediococcus pentosaceus ATCC 25745Fasta
338963-gBac Pelobacter carbinolicus DSM 2380Fasta
319225-gBac Pelodictyon luteolum DSM 273Fasta
74109-gBac Photobacterium profundumFasta
243265-gBac Photorhabdus luminescens subsp. laumondii TTO1Fasta
365044-gBac Polaromonas naphthalenivorans CJ2Fasta
296591-gBac Polaromonas sp. JS666Fasta
242619-gBac Porphyromonas gingivalis W83Fasta
146891-gBac Prochlorococcus marinus str. AS9601Fasta
167546-gBac Prochlorococcus marinus str. MIT 9301Fasta
59922-gBac Prochlorococcus marinus str. MIT 9303Fasta
74546-gBac Prochlorococcus marinus str. MIT 9312Fasta
74547-gBac Prochlorococcus marinus str. MIT 9313Fasta
167542-gBac Prochlorococcus marinus str. MIT 9515Fasta
167555-gBac Prochlorococcus marinus str. NATL1AFasta
59920-gBac Prochlorococcus marinus str. NATL2AFasta
167539-gBac Prochlorococcus marinus subsp. marinus str. CCMP1375Fasta
59919-gBac Prochlorococcus marinus subsp. pastoris str. CCMP1986Fasta
267747-gBac Propionibacterium acnes KPA171202Fasta
342610-gBac Pseudoalteromonas atlantica T6cFasta
326442-gBac Pseudoalteromonas haloplanktis TAC125Fasta
286-gBac PseudomonasFasta
208964-gBac Pseudomonas aeruginosa PAO1Fasta
208963-gBac Pseudomonas aeruginosa UCBPP-PA14Fasta
220664-gBac Pseudomonas fluorescens Pf-5Fasta
205922-gBac Pseudomonas fluorescens PfO-1Fasta
160488-gBac Pseudomonas putida KT2440Fasta
264730-gBac Pseudomonas syringae pv. phaseolicola 1448AFasta
205918-gBac Pseudomonas syringae pv. syringae B728aFasta
223283-gBac Pseudomonas syringae pv. tomato str. DC3000Fasta
259536-gBac Psychrobacter arcticus 273-4Fasta
335284-gBac Psychrobacter cryohalolentis K5Fasta
357804-gBac Psychromonas ingrahamii 37Fasta
381666-gBac Ralstonia eutropha H16Fasta
264198-gBac Ralstonia eutropha JMP134Fasta
266264-gBac Ralstonia metallidurans CH34Fasta
305-gBac Ralstonia solanacearumFasta
347834-gBac Rhizobium etli CFN 42Fasta
216596-gBac Rhizobium leguminosarum bv. viciae 3841Fasta
272943-gBac Rhodobacter sphaeroides 2.4.1Fasta
349101-gBac Rhodobacter sphaeroides ATCC 17029Fasta
101510-gBac Rhodococcus sp. RHA1Fasta
338969-gBac Rhodoferax ferrireducens T118Fasta
243090-gBac Rhodopirellula baltica SH 1Fasta
316055-gBac Rhodopseudomonas palustris BisA53Fasta
316056-gBac Rhodopseudomonas palustris BisB18Fasta
316057-gBac Rhodopseudomonas palustris BisB5Fasta
258594-gBac Rhodopseudomonas palustris CGA009Fasta
316058-gBac Rhodopseudomonas palustris HaA2Fasta
269796-gBac Rhodospirillum rubrum ATCC 11170Fasta
336407-gBac Rickettsia bellii RML369-CFasta
272944-gBac Rickettsia conorii str. Malish 7Fasta
315456-gBac Rickettsia felis URRWXCal2Fasta
272947-gBac Rickettsia prowazekii str. Madrid EFasta
257363-gBac Rickettsia typhi str. WilmingtonFasta
375451-gBac Roseobacter denitrificans OCh 114Fasta
266117-gBac Rubrobacter xylanophilus DSM 9941Fasta
203122-gBac Saccharophagus degradans 2-40Fasta
309807-gBac Salinibacter ruber DSM 13855Fasta
321314-gBac Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67Fasta
295319-gBac Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150Fasta
209261-gBac Salmonella enterica subsp. enterica serovar Typhi Ty2Fasta
220341-gBac Salmonella enterica subsp. enterica serovar Typhi str. CT18Fasta
99287-gBac Salmonella typhimurium LT2Fasta
326297-gBac Shewanella amazonensis SB2BFasta
318161-gBac Shewanella denitrificans OS217Fasta
318167-gBac Shewanella frigidimarina NCIMB 400Fasta
211586-gBac Shewanella oneidensis MR-1Fasta
94122-gBac Shewanella sp. ANA-3Fasta
60480-gBac Shewanella sp. MR-4Fasta
60481-gBac Shewanella sp. MR-7Fasta
351745-gBac Shewanella sp. W3-18-1Fasta
300268-gBac Shigella boydii Sb227Fasta
300267-gBac Shigella dysenteriae Sd197Fasta
198215-gBac Shigella flexneri 2a str. 2457TFasta
198214-gBac Shigella flexneri 2a str. 301Fasta
373384-gBac Shigella flexneri 5 str. 8401Fasta
300269-gBac Shigella sonnei Ss046Fasta
246200-gBac Silicibacter pomeroyi DSS-3Fasta
292414-gBac Silicibacter sp. TM1040Fasta
266834-gBac Sinorhizobium meliloti 1021Fasta
343509-gBac Sodalis glossinidius str. 'morsitans'Fasta
234267-gBac Solibacter usitatus Ellin6076Fasta
317655-gBac Sphingopyxis alaskensis RB2256Fasta
273036-gBac Staphylococcus aureus RF122Fasta
93062-gBac Staphylococcus aureus subsp. aureus COLFasta
282458-gBac Staphylococcus aureus subsp. aureus MRSA252Fasta
282459-gBac Staphylococcus aureus subsp. aureus MSSA476Fasta
196620-gBac Staphylococcus aureus subsp. aureus MW2Fasta
158878-gBac Staphylococcus aureus subsp. aureus Mu50Fasta
158879-gBac Staphylococcus aureus subsp. aureus N315Fasta
93061-gBac Staphylococcus aureus subsp. aureus NCTC 8325Fasta
367830-gBac Staphylococcus aureus subsp. aureus USA300Fasta
176280-gBac Staphylococcus epidermidis ATCC 12228Fasta
176279-gBac Staphylococcus epidermidis RP62AFasta
279808-gBac Staphylococcus haemolyticus JCSC1435Fasta
342451-gBac Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305Fasta
208435-gBac Streptococcus agalactiae 2603V/RFasta
205921-gBac Streptococcus agalactiae A909Fasta
211110-gBac Streptococcus agalactiae NEM316Fasta
210007-gBac Streptococcus mutans UA159Fasta
373153-gBac Streptococcus pneumoniae D39Fasta
171101-gBac Streptococcus pneumoniae R6Fasta
170187-gBac Streptococcus pneumoniae TIGR4Fasta
160490-gBac Streptococcus pyogenes M1 GASFasta
370552-gBac Streptococcus pyogenes MGAS10270Fasta
286636-gBac Streptococcus pyogenes MGAS10394Fasta
370554-gBac Streptococcus pyogenes MGAS10750Fasta
370553-gBac Streptococcus pyogenes MGAS2096Fasta
198466-gBac Streptococcus pyogenes MGAS315Fasta
293653-gBac Streptococcus pyogenes MGAS5005Fasta
319701-gBac Streptococcus pyogenes MGAS6180Fasta
186103-gBac Streptococcus pyogenes MGAS8232Fasta
370551-gBac Streptococcus pyogenes MGAS9429Fasta
193567-gBac Streptococcus pyogenes SSI-1Fasta
160491-gBac Streptococcus pyogenes str. ManfredoFasta
388919-gBac Streptococcus sanguinis SK36Fasta
299768-gBac Streptococcus thermophilus CNRZ1066Fasta
322159-gBac Streptococcus thermophilus LMD-9Fasta
264199-gBac Streptococcus thermophilus LMG 18311Fasta
227882-gBac Streptomyces avermitilis MA-4680Fasta
1902-gBac Streptomyces coelicolorFasta
292459-gBac Symbiobacterium thermophilum IAM 14863Fasta
269084-gBac Synechococcus elongatus PCC 6301Fasta
1140-gBac Synechococcus elongatus PCC 7942Fasta
64471-gBac Synechococcus sp. CC9311Fasta
110662-gBac Synechococcus sp. CC9605Fasta
316279-gBac Synechococcus sp. CC9902Fasta
321332-gBac Synechococcus sp. JA-2-3B'a(2-13)Fasta
321327-gBac Synechococcus sp. JA-3-3AbFasta
84588-gBac Synechococcus sp. WH 8102Fasta
1148-gBac Synechocystis sp. PCC 6803Fasta
335543-gBac Syntrophobacter fumaroxidans MPOBFasta
335541-gBac Syntrophomonas wolfei subsp. wolfei str. GoettingenFasta
56780-gBac Syntrophus aciditrophicus SBFasta
273068-gBac Thermoanaerobacter tengcongensis MB4Fasta
269800-gBac Thermobifida fusca YXFasta
197221-gBac Thermosynechococcus elongatus BP-1Fasta
243274-gBac Thermotoga maritima MSB8Fasta
262724-gBac Thermus thermophilus HB27Fasta
300852-gBac Thermus thermophilus HB8Fasta
292415-gBac Thiobacillus denitrificans ATCC 25259Fasta
317025-gBac Thiomicrospira crunogena XCL-2Fasta
326298-gBac Thiomicrospira denitrificans ATCC 33889Fasta
243275-gBac Treponema denticola ATCC 35405Fasta
243276-gBac Treponema pallidum subsp. pallidum str. NicholsFasta
203124-gBac Trichodesmium erythraeum IMS101Fasta
218496-gBac Tropheryma whipplei TW08/27Fasta
203267-gBac Tropheryma whipplei str. TwistFasta
273119-gBac Ureaplasma parvum serovar 3 str. ATCC 700970Fasta
391735-gBac Verminephrobacter eiseniae EF01-2Fasta
243277-gBac Vibrio cholerae O1 biovar eltor str. N16961Fasta
312309-gBac Vibrio fischeri ES114Fasta
223926-gBac Vibrio parahaemolyticus RIMD 2210633Fasta
216895-gBac Vibrio vulnificus CMCP6Fasta
196600-gBac Vibrio vulnificus YJ016Fasta
36870-gBac Wigglesworthia glossinidia endosymbiont of Glossina brevipalpisFasta
163164-gBac Wolbachia endosymbiont of Drosophila melanogasterFasta
292805-gBac Wolbachia endosymbiont strain TRS of Brugia malayiFasta
273121-gBac Wolinella succinogenes DSM 1740Fasta
190486-gBac Xanthomonas axonopodis pv. citri str. 306Fasta
314565-gBac Xanthomonas campestris pv. campestris str. 8004Fasta
190485-gBac Xanthomonas campestris pv. campestris str. ATCC 33913Fasta
341-gBac Xanthomonas campestris pv. vesicatoriaFasta
291331-gBac Xanthomonas oryzae pv. oryzae KACC10331Fasta
342109-gBac Xanthomonas oryzae pv. oryzae MAFF 311018Fasta
160492-gBac Xylella fastidiosa 9a5cFasta
183190-gBac Xylella fastidiosa Temecula1Fasta
393305-gBac Yersinia enterocolitica subsp. enterocolitica 8081Fasta
360102-gBac Yersinia pestis AntiquaFasta
214092-gBac Yersinia pestis CO92Fasta
187410-gBac Yersinia pestis KIMFasta
377628-gBac Yersinia pestis Nepal516Fasta
229193-gBac Yersinia pestis biovar Microtus str. 91001Fasta
273123-gBac Yersinia pseudotuberculosis IP 32953Fasta
264203-gBac Zymomonas mobilis subsp. mobilis ZM4Fasta
 
help/databases.1260787745.txt · Last modified: 2010/03/16 15:21 (external edit)
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