about:webservices [2013/06/11 08:53]
hpm (172.22.68.212) |
about:webservices [2013/08/05 10:18] (current)
hpm (172.22.68.212) |
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| | ^ REST Service ^ SOAP Service ^ Description ^ | | ^ REST Service ^ SOAP Service ^ Description ^ |
| - | | [[:services:pfa:FingerPRINTScan (REST)]] | [[:services:pfa:FingerPRINTScan(SOAP)]] | Identifying the closest matching PRINTS sequence motif fingerprints in a protein sequence | | + | | [[:services:pfa:FingerPRINTScan (REST)]] | [[:services:pfa:FingerPRINTScan(SOAP)]] | Identifying the closest matching PRINTS sequence motif fingerprints in a protein sequence. | |
| - | | [[:services:pfa:iprscan_rest|InterProScan (REST)]] | [[:services:pfa:iprscan_soap|InterProScan (SOAP)]] | A tool that combines different protein signature recognition methods. | | + | | [[:services:pfa:iprscan_rest|InterProScan 4.x (REST)]] | [[:services:pfa:iprscan_soap|InterProScan 4.x (SOAP)]] | A tool that combines different protein signature recognition methods. | |
| - | | [[:services:pfa:Phobius (REST)]] | [[:services:pfa:Phobius (SOAP)]] | Prediction of transmembrane topology and signal peptides from the amino acid sequence of a protein | | + | | [[:services:pfa:HMMER hmmscan (REST)]] | [[:services:pfa:HMMER hmmscan (SOAP)]] | Search a database of Hidden Markov Models (HMMs) with a sequence to infer membership of a sequence family. | |
| - | | [[:services:pfa:Pratt (REST)]] | [[:services:pfa:Pratt (SOAP)]] | Searching for patterns conserved in sets of unaligned protein sequences | | + | | [[:services:pfa:Phobius (REST)]] | [[:services:pfa:Phobius (SOAP)]] | Prediction of transmembrane topology and signal peptides from the amino acid sequence of a protein. | |
| - | | [[:services:pfa:ps_scan_rest|PROSITE Scan (REST)]] | [[:services:pfa:ps_scan_soap|PROSITE Scan (SOAP)]] | Comparing a protein sequence against the signatures in PROSITE | | + | | [[:services:pfa:Pratt (REST)]] | [[:services:pfa:Pratt (SOAP)]] | Search for patterns conserved in sets of unaligned protein sequences. | |
| | + | | [[:services:pfa:ps_scan_rest|PROSITE Scan (REST)]] | [[:services:pfa:ps_scan_soap|PROSITE Scan (SOAP)]] | Comparing a protein sequence against the signatures in PROSITE (both patterns and profiles). | |
| | | [[:services:pfa:RADAR (REST)]] | [[:services:pfa:RADAR (SOAP)]] | Detection and alignment of repeats in protein sequences. | | | | [[:services:pfa:RADAR (REST)]] | [[:services:pfa:RADAR (SOAP)]] | Detection and alignment of repeats in protein sequences. | |
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| | ==== Sequence Similarity Search (SSS) ==== | | ==== Sequence Similarity Search (SSS) ==== |
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| | + | Identify potentially homologous sequences based on sequence similarity. |
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| | ^ REST Service ^ SOAP Service ^ Description ^ | | ^ REST Service ^ SOAP Service ^ Description ^ |
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| | ==== Sequence Format Conversion ==== | | ==== Sequence Format Conversion ==== |
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| | + | Convert between common sequence formats, or verify the formatting of a sequence. |
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| | ^ REST Service ^ SOAP Service ^ Description ^ | | ^ REST Service ^ SOAP Service ^ Description ^ |
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| | ==== Sequence Statistics ==== | | ==== Sequence Statistics ==== |
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| | + | Analyse a sequence to determine its properties and use statistics to assign significance. |
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| | ^ REST Service ^ SOAP Service ^ Description ^ | | ^ REST Service ^ SOAP Service ^ Description ^ |
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| | ==== Sequence Translation ==== | | ==== Sequence Translation ==== |
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| | + | Translate a coding nucleotide sequence in to a protein sequence, or back-translate from a protein sequence to a possible coding nucleotide sequence. |
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| | ^ REST Service ^ SOAP Service ^ Description ^ | | ^ REST Service ^ SOAP Service ^ Description ^ |
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| | ==== Structural Analysis ==== | | ==== Structural Analysis ==== |
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| | + | Analysis of macromolecular structures. |
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| | ^ REST Service ^ SOAP Service ^ Description ^ | | ^ REST Service ^ SOAP Service ^ Description ^ |
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| | ==== Literature and Ontologies ==== | | ==== Literature and Ontologies ==== |
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| | + | Look-up ontology terms and navigate ontology relationships or access and analyse the literature. |
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| | ^ Service ^ Clients ^ Description ^ | | ^ Service ^ Clients ^ Description ^ |
