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about:news [2012/12/04 15:19]
hpm (172.22.68.212) New CENSOR services
about:news [2014/08/18 15:07] (current)
wli (172.22.69.249)
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====== News ====== ====== News ======
-==== 4th December 2012 ====+==== Monday 18th August 2014 ====
-New web services for CENSOR are now available: +The InterProScan 5 services ([[services:pfa:iprscan5_rest|InterProScan 5 (REST)]] & [[services:pfa:iprscan5_soap|InterProScan 5 (SOAP)]]) have been updated to use InterProScan v5.7-48.0.
-  * [[:services:so:CENSOR (REST)]] +
-  * [[:services:so:CENSOR (SOAP)]]+
-The old [[:services:censor|WSCensor]] service has been deprecated and should not be used for now development.+==== 30th June 2014 ====
-==== 27th November 2012 ====+The new web service for EB-eye is available to the public: \\ 
 +- [[services:eb-eye_rest| EB-eye (REST)]]
-The WSDaliLite and WSMaxsprout services have been **decommissioned**, and replaced by: +==== 27th May 2014 ====
-  * DaliLite: +
-    * [[:services:structure:DaliLite (REST)]] +
-    * [[:services:structure:DaliLite (SOAP)]] +
-  * MaxSprout: +
-    * [[:services:structure:MaxSprout (REST)]] +
-    * [[:services:structure:MaxSprout (SOAP)]]+
-The documentation for the WSDaliLite and WSMaxsprout services has been archived and is provided for reference purposes: +The [[services:pfa:iprscan5_rest| InterProScan 5 (REST)]] & [[services:pfa:iprscan5_soap| InterProScan 5(SOAP)]] services have been updated to use InterProScan v5.4-47.0 and Panther v9.0.
-  * DaliLite: +
-    * [[:services:archive:structure:WSDaliLite]] +
-    * [[:services:archive:structure:WSDaliLite clients]] +
-  * MaxSprout: +
-    * [[:services:archive:structure:WSMaxsprout]] +
-    * [[:services:archive:structure:WSMaxsprout clients]]+
-==== 12th November 2012 ====+==== 30th April 2014 ====
-The FASTA ([[:services:sss:fasta_rest|REST]] & [[:services:sss:fasta_soap|SOAP]]), FASTM ([[:services:sss:fastm_rest|REST]] &; [[:services:sss:fastm_soap|SOAP]]) and lalign ([[:services:psa:lalign_rest|REST]] & [[:services:psa:lalign_soap|SOAP]]) services have been updated to use FASTA version 36.3.5e Sep, 2012(preload8).+The following new web services are available to the public: \\ 
 +- [[services:pfa:pfamscan_rest|PfamScan (REST)]] & [[services:pfa:pfamscan_soap|PfamScan (SOAP)]] for protein functional analysis; \\ 
 +- [[services:rna:infernal_cmscan_rest|Infernal cmscan (REST)]] & [[services:rna:infernal_cmscan_soap|Infernal cmscan (SOAP)]] for RNA analysis. \\
-==== 29th October 2012 ====+==== 9th April 2014 ====
-As previously mentioned the old CiteXplore v1 web service will be retired on the 31st October 2012. Users should migrate all usage to the replacement [[http://www.ebi.ac.uk/citexplore/webservice.jsp|CiteXplore v3.0.1 web service]] as soon as possible. For queries relating to this service retirement please contact us via. [[http://www.ebi.ac.uk/support/index.php?query=WebServices|EMBL-EBI Support]].+The InterProScan 4.x web services were retired. Users of these services are directed to the replacement [[services:pfa:iprscan5_rest|InterProScan 5 (REST)]] & [[services:pfa:iprscan5_soap|InterProScan 5 (SOAP)]] web services.
-==== 24th October 2012 ==== 
-The new web services for DaliLite and MaxSprout have come out of beta: +==== 21st March 2014 ==== 
-  * [[:services:structure:DaliLite (REST)]] +The emblcds (Coding) database has been retired from the EB-eye search engine. It is now replaced by coding_release (Coding (Release)) and coding_update (Coding (Update)).
-  * [[:services:structure:DaliLite (SOAP)]] +
-  * [[:services:structure:MaxSprout (REST)]] +
-  * [[:services:structure:MaxSprout (SOAP)]]+
-The old [[:services:dalilite|WSDaliLite]] and [[:services:maxsprout|WSMaxsprout]] services have been deprecated and will be decommissioned on Tuesday 27th November 2012.+==== 5th March 2014 ====
-==== 11th September 2012 ====+The Clustal Omega services ([[:services:msa:clustalo_rest| REST]]  & [[:services:msa:clustalo_soap| SOAP]]) have been updated to use Clustal Omega v1.2.1.
-A set of services for sequence format conversion and now available for beta testing: +==== Wednesday 12th February 2014 ====
-  * [[:services:sfc:EMBOSS seqret (REST)]] +
-  * [[:services:sfc:EMBOSS seqret (SOAP)]] +
-  * [[:services:sfc:Readseq (REST)]] +
-  * [[:services:sfc:Readseq (SOAP)]]+
-These services focus on the format conversion and manipulation of sequence data, for a tool specialising in the manipulation and format conversion of multiple sequence alignment formats, see MView ([[:services:msa:MView (REST)|REST]] or [[:services:msa:MView (SOAP)|SOAP]]).+The  web services for NCBI BLAST+ ([[services:sss:ncbi_blast_rest|NCBI BLAST (REST)]] & [[services:sss:ncbi_blast_soap|NCBI BLAST (SOAP)]]) have been updated to use NCBI BLAST+ v2.2.29.
-==== 29th August 2012 ====+==== Tuesday 4th February 2014 ====
-New web services for DaliLite and MaxSprout are now available for beta testing: +The new web services for MapMi ([[services:rna:mapmi_rest|MapMi (REST)]] & [[services:rna:mapmi_soap|MapMi (SOAP)]]) are available to the public.
-  * [[:services:structure:DaliLite (REST)]] +
-  * [[:services:structure:DaliLite (SOAP)]] +
-  * [[:services:structure:MaxSprout (REST)]] +
-  * [[:services:structure:MaxSprout (SOAP)]] +
-Please report any feedback or issues encountered to us via. [[http://www.ebi.ac.uk/support/index.php?query=WebServices|EMBL-EBI Support]].+
-==== 23rd August 2012 ====+==== Wednesday 29th January 2014 ====
-REST and SOAP (document/literal) Web Services of PromoterWise for pair-wise alignments are now available, see the following for details: +The InterProScan 5 services ([[services:pfa:iprscan5_rest|InterProScan 5 (REST)]] & [[services:pfa:iprscan5_soap|InterProScan 5 (SOAP)]]) have been updated to use InterProScan v5.3-46.0.
-  * [[:services:psa:PromoterWise (REST)]] +
-  * [[:services:psa:PromoterWise (SOAP)]]+
-==== 15th August 2012 ====+==== Tuesday 28th January 2014 ====
-REST and SOAP (document/literal) Web Services of GeneWise & Wise2DBA for pair-wise alignments are now available, see the following for details: +The FASTA services ([[services:sss:fasta_rest|FASTA (REST)]] & [[services:sss:fasta_soap|FASTA (SOAP)]]) and the lalign ([[services:psa:lalign_rest|lalign (REST)]] & [[services:psa:lalign_soap|lalign (SOAP)]]) services have been updated to use FASTA version 36.3.6d Jan, 2014.
-  * [[:services:psa:GeneWise (REST)]] +
-  * [[:services:psa:GeneWise (SOAP)]] +
-  * [[:services:psa:Wise2DBA (REST)]] +
-  * [[:services:psa:Wise2DBA (SOAP)]]+
-==== 13th July 2012 ====+==== 2013 ====
-Recently a new version of the [[http://www.ebi.ac.uk/citexplore/webservice.jsp|CiteXplore Web Service]] was released by the [[http://www.ebi.ac.uk/literature/|Literature Services Group]].+Archived news for [[.:News:2013]].
-The latest Web Service (version 3.0.1) is SOAP based and gives programmatic access to all of the publications and related information in UK PubMed Central. An example Java client is provided, together with comprehensive documentation on the new methods available. Version 3 of the service has been modularised, and allows users to pick and choose the components required, making information retrieval more efficient. 
- 
-The new Web Service is now also being used by the front-end application of [[http://ukpmc.ac.uk/|UK PubMed Central]], improving its performance. Version 1 of the Web Service will be maintained for use until the end of October 2012. 
- 
-==== 11th July 2012 ==== 
- 
-The FASTA ([[:services:sss:fasta_rest| REST]]  & [[:services:sss:fasta_soap| SOAP]]), FASTM ([[:services:sss:fastm_rest| REST]]  & [[:services:sss:fastm_soap| SOAP]]) and lalign ([[:services:psa:lalign_rest| REST]]  & [[:services:psa:lalign_soap| SOAP]]) services have been updated to use FASTA version 36.3.5c Jun, 2012(preload8). 
- 
-==== 20th June 2012 ==== 
- 
-REST and SOAP (document/literal) Web Services for SAPS, EMBOSS pepinfo, pepstats and pepwindow are now available, see the following for details: 
-  * [[:services:seqstats:EMBOSS pepinfo (REST)]] 
-  * [[:services:seqstats:EMBOSS pepinfo (SOAP)]] 
-  * [[:services:seqstats:EMBOSS pepstats (REST)]] 
-  * [[:services:seqstats:EMBOSS pepstats (SOAP)]] 
-  * [[:services:seqstats:EMBOSS pepwindow (REST)]] 
-  * [[:services:seqstats:EMBOSS pepwindow (SOAP)]] 
-  * [[:services:seqstats:SAPS (REST)]] 
-  * [[:services:seqstats:SAPS (SOAP)]] 
- 
-==== 23rd May 2012 ==== 
- 
-The NCBI BLAST services ([[:services:sss:ncbi_blast_rest| REST]] & [[:services:sss:ncbi_blast_soap| SOAP]]) have been updated to use NCBI BLAST 2.2.26. 
- 
-==== 16th May 2012 ==== 
- 
-The Clustal Omega services ([[:services:msa:clustalo_rest| REST]]  & [[:services:msa:clustalo_soap| SOAP]]) have been updated to use Clustal Omega 1.1.0 and nucleotide alignments are now supported. 
- 
-The EBI Application Result XML contents for sequence similarity search have been updated with alignment strand information in a consistent format (e.g. <strand>minus/plus</strand> means the query is "minus" ("reverse") and the subject is "plus" ("forward")).  
- 
-==== 17th January 2012 ==== 
-REST and SOAP (document/literal) Web Services for EMBOSS translation tools are now available, see the following for details: 
-  * [[:services:st:emboss_transeq_rest|EMBOSS Transeq (REST)]] 
-  * [[:services:st:emboss_transeq_soap|EMBOSS Transeq (SOAP)]] 
-  * [[:services:st:emboss_sixpack_rest|EMBOSS Sixpack (REST)]] 
-  * [[:services:st:emboss_sixpack_soap|EMBOSS Sixpack (SOAP)]] 
-  * [[:services:st:emboss_backtranseq_rest|EMBOSS Backtranseq (REST)]] 
-  * [[:services:st:emboss_backtranseq_soap|EMBOSS Backtranseq (SOAP)]] 
-  * [[:services:st:emboss_backtranambig_rest|EMBOSS Backtranambig (REST)]] 
-  * [[:services:st:emboss_backtranambig_soap|EMBOSS Backtranambig (SOAP)]] 
- 
-==== 10th January 2012 ==== 
- 
-The dbfetch services ([[http://www.ebi.ac.uk/Tools/dbfetch/|dbfetch]], [[:services:dbfetch_rest|WSDbfetch (REST)]] and [[:services:dbfetch|WSDbfetch (SOAP)]]) have been updated to include summary information detailing the data sources used by dbfetch in the database meta-information. 
- 
-==== 2011 ==== 
- 
-Archived news for [[.:News:2011]]. 
 
about/news.1354634364.txt · Last modified: 2012/12/04 15:19 by hpm
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