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about:news:2011 [2012/01/12 09:19]
hpm (172.22.68.212) created |
about:news:2011 [2013/03/08 11:29] (current)
hpm (172.22.68.212) |
| | ==== 2012 ==== | | ==== 2012 ==== |
| | | | |
| - | News for [[..:News|2012]]. | + | News for [[2012]]. |
| | | | |
| | ==== 18th October 2011 ==== | | ==== 18th October 2011 ==== |
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| | The multiple sequence alignment (MSA) selection of services has been expanded to include two new tools: | | The multiple sequence alignment (MSA) selection of services has been expanded to include two new tools: |
| - | - DbClustal (DOI:[[http://dx.doi.org/10.1093/nar/28.15.2919|10.1093/nar/28.15.2919]]; PMID:[[http://www.ebi.ac.uk/citexplore/citationDetails.do?externalId=10908355&dataSource=MED|10908355]]): ClustalW based multiple sequence alignment from a protein BLAST result preserving aligned regions found by BLAST and using the full length sequences of the BLAST hits. | + | - DbClustal (DOI:[[http://dx.doi.org/10.1093/nar/28.15.2919|10.1093/nar/28.15.2919]]; PMID:[[http://europepmc.org/abstract/MED/10908355|10908355]]): ClustalW based multiple sequence alignment from a protein BLAST result preserving aligned regions found by BLAST and using the full length sequences of the BLAST hits. |
| | * [[:services:msa:DbClustal (REST)]] | | * [[:services:msa:DbClustal (REST)]] |
| | * [[:services:msa:DbClustal (SOAP)]] | | * [[:services:msa:DbClustal (SOAP)]] |
| - | - MView (DOI:[[http://dx.doi.org/10.1093/bioinformatics/14.4.380|10.1093/bioinformatics/14.4.380]]; PMID:[[http://www.ebi.ac.uk/citexplore/citationDetails.do?externalId=9632837&dataSource=MED|9632837]]): generate a multiple sequence alignment from a sequence similarity search result (e.g. from BLAST or FASTA) using the regions found by the sequence search. Can also be used to reformat and colour multiple sequence alignments. | + | - MView (DOI:[[http://dx.doi.org/10.1093/bioinformatics/14.4.380|10.1093/bioinformatics/14.4.380]]; PMID:[[http://europepmc.org/abstract/MED/9632837|9632837]]): generate a multiple sequence alignment from a sequence similarity search result (e.g. from BLAST or FASTA) using the regions found by the sequence search. Can also be used to reformat and colour multiple sequence alignments. |
| | * [[:services:msa:MView (REST)]] | | * [[:services:msa:MView (REST)]] |
| | * [[:services:msa:MView (SOAP)]] | | * [[:services:msa:MView (SOAP)]] |
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