DaliLite Pairwise Alignment Tool for Protein Structures

Pairwise alignment of protein structures

DaliLite computes optimal and suboptimal structural alignments between two protein structures. It will compare all chains in the first structure against all chains in the second (unless specific chain IDs are given). The resulting superimposed coordinate files can be downloaded or viewed interactively in Jmol.

STEP 1 - Enter Coordinates in PDB format

Enter first structure(mol1):

Or, upload a file:

Use chain ID (first structure):

AND

Second structure(mol2):

Or, upload a file:

Use chain ID (second structure):

STEP 2 - Submit your job

Be notified by email (Tick this box if you want to be notified by email when the results are available)

EMAIL:

TITLE: If available, the title will be included in the subject of the notification email and can be used as a way to identify your analysis

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