Sequence Similarity & Analysis

Sequence Similarity Searching

Various sequence database similarity search tools which are useful for inferring homology. For example:

• FASTA
• NCBI BLAST
• PSI-BLAST
• PSI-Search
• SSearch
• WU-BLAST

Go to Sequence Similarity Searching page.

Multiple Sequence Alignment

A selection of multiple sequence alignment tools, including:

• Clustal Omega
• ClustalW2
• MUSCLE
• T-COFFEE

Go to Multiple Sequence Alignment page.

Sequence Analysis Tools

Sequence analysis encompasses the use of various bioinformatic methods to determine the biological function and/or structure of genes and the proteins they code for. For example:

• CpGPlot/CpGReport
• Pairwise Sequence Alignment
• Transeq

Go to Sequence Analysis Tools page.