EMBL-EBI to be HTTPS by default from 1st October

On the 1st October the majority of services hosted on www.ebi.ac.uk will be served over HTTPS by default. Services that are becoming HTTPS by default will automatically redirect users accessing the site on insecure HTTP URLs to secure HTTPS URLs.
Users of EMBL-EBI services may wish to update links, bookmarks or API clients to use the HTTPS URLs.

Whole Genome Shotgun Sequence Similarity Search

This tool provides sequence similarity searching against the EMBL (WGS) database using the FASTA suite of programs. FASTA provides a heuristic search with a nucleotide query. TFASTX and TFASTY translate the DNA database for searching with a protein query. Optimal searches are available with SSEARCH (local).

STEP 1 - Select your databases
    • Eukaryota
    • Archaea
    • Bacteria
    • Environmental
STEP 2 - Enter your input sequence

a sequence in any supported format:

a file:

STEP 3 - Set your parameters
STEP 4 - Submit your job
(Tick this box if you want to be notified by email when the results are available)
If available, the title will be included in the subject of the notification email and can be used as a way to identify your analysis

If you plan to use these services during a course please contact us.