Pairwise Sequence Alignment (PROTEIN)

EMBOSS Matcher identifies local similarities in two input sequences using a rigorous algorithm based on Bill Pearson's lalign application, version 2.0u4 (Feb. 1996).

This is the form for protein sequences. Please go to the nucleotide form if you wish to align DNA or RNA sequences.

STEP 1 - Enter your protein sequences

your first protein sequence in any supported format:

Or, a file:

AND

your second protein sequence in any supported format:

Or, a file:

STEP 2 - Set your pairwise alignment options
STEP 3 - Submit your job
(Tick this box if you want to be notified by email when the results are available)
If available, the title will be included in the subject of the notification email and can be used as a way to identify your analysis

If you plan to use these services during a course please contact us.