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EBI Dbfetch

ID   KF573699; SV 1; linear; genomic DNA; STD; HUM; 519 BP.
XX
AC   KF573699;
XX
DT   01-SEP-2013 (Rel. 118, Created)
DT   01-SEP-2013 (Rel. 118, Last updated, Version 1)
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DE   Homo sapiens chromosome 14 WGS contig WGS_CEU_AL110118.7_14908 genomic
DE   sequence.
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KW   ASSEMBLY_CORRECTION.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-519
RG   Genome Reference Consortium
RA   ;
RT   ;
RL   Submitted (26-AUG-2013) to the INSDC.
RL   NCBI, NIH, Bethesda, MD 20892, USA
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DR   MD5; 79267ef8f7aa9f6f7b7cc2c254ca4f9c.
DR   ENA-CON; GL000116.
DR   ENA-CON; KI270847.
DR   Ensembl-Scaffolds; KF573699.1:1-519; homo_sapiens.
DR   GOA; E9PCJ7.
DR   GOA; G3V2G3.
DR   GOA; G3V3Q6.
DR   GOA; H0YJA0.
DR   GOA; H0YJM2.
DR   HGNC; HGNC:20344; UBR7.
DR   InterPro; IPR001965; Znf_PHD.
DR   InterPro; IPR003126; Znf_N-recognin.
DR   InterPro; IPR011011; Znf_FYVE_PHD.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   InterPro; IPR028024; TMEM251.
DR   UniProtKB/TrEMBL; E9PCJ7; E9PCJ7_HUMAN.
DR   UniProtKB/TrEMBL; G3V253; G3V253_HUMAN.
DR   UniProtKB/TrEMBL; G3V2G3; G3V2G3_HUMAN.
DR   UniProtKB/TrEMBL; G3V336; G3V336_HUMAN.
DR   UniProtKB/TrEMBL; G3V3P5; G3V3P5_HUMAN.
DR   UniProtKB/TrEMBL; G3V3Q6; G3V3Q6_HUMAN.
DR   UniProtKB/TrEMBL; H0YJA0; H0YJA0_HUMAN.
DR   UniProtKB/TrEMBL; H0YJM2; H0YJM2_HUMAN.
DR   UniProtKB/TrEMBL; H0YJY4; H0YJY4_HUMAN.
XX
CC   This sequence was generated to audit a questionable region in the
CC   reference genome sequence. This sequence was assembled from a
CC   random sampling of Illumina and LS454 reads representing a single
CC   population of the 1000 Genomes Project
CC   (http://www.1000genomes.org/), using cortex_con
CC   (http://cortexassembler.sourceforge.net/).
CC   ##Metadata-START##
CC   1000 Genomes Population :: CEU
CC   Target                  :: AL110118.7
CC   Target Base             :: 14907
CC   Average Coverage        :: 15.18x
CC   Minimum Coverage        :: 4x
CC   Maximum Coverage        :: 32x
CC   ##Metadata-END##
CC   ##Assembly-Data-START##
CC   Assembly Method       :: cortex_con Beta 0.04c, April 2011
CC   Sequencing Technology :: Illumina GAIIx; 454
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..519
FT                   /organism="Homo sapiens"
FT                   /chromosome="14"
FT                   /mol_type="genomic DNA"
FT                   /pop_variant="CEU"
FT                   /clone="WGS_CEU_AL110118.7_14908"
FT                   /db_xref="taxon:9606"
FT                   /bio_material="NA12878"
FT   misc_feature    344
FT                   /note="Region: Target update"
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SQ   Sequence 519 BP; 148 A; 131 C; 106 G; 134 T; 0 other;
     ccaattctca tcctttgtca gtcttcttcc tacccatcct tttccatttt tgtacctcga        60
     agtgtagggt gagtcactaa acaccacatc acaccccctc aaacacttgc tcactcacaa       120
     cgtcttccaa atgccaaaca gatccttttc tcctctctcc cctcccttgc cagagccact       180
     tgctgttctg tttccggtct atttccaggg gaggggggca gactgcagat agacatgggt       240
     acttgcttca ttttgccaaa aaaagaaaga aagaaaaagt actagctagc acttgtccaa       300
     ctaaattgca gaggaactag ctgtcaagga gctcaccgca aatccctatg gatttgaaaa       360
     tctctttaac ctgactctcc cattcggtcc ctaataaata aataaataaa taatcttagg       420
     atgggaaaat cagggacaaa gatgtctgga tctgagaggt cgcggggtgg tttcgtgaaa       480
     agcagtggtg caccaagaag aggctggaga ggacggaca                              519
//


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