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EBI Dbfetch

ID   KF495814; SV 1; linear; genomic DNA; STD; HUM; 1272 BP.
XX
AC   KF495814;
XX
DT   07-AUG-2013 (Rel. 117, Created)
DT   07-AUG-2013 (Rel. 117, Last updated, Version 1)
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DE   Homo sapiens chromosome X WGS contig
DE   WGS_CEU_AJ271735.1_146684_146772_147203_147326 genomic sequence.
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KW   ASSEMBLY_CORRECTION.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-1272
RG   Genome Reference Consortium
RA   ;
RT   ;
RL   Submitted (05-AUG-2013) to the INSDC.
RL   NCBI, NIH, Bethesda, MD 20892, USA
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DR   MD5; 8b37d6e1168b3a8393849f17ad939d31.
DR   ENA-CON; GL000190.
DR   ENA-CON; GL000172.
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CC   This sequence was generated to audit a questionable region in the
CC   reference genome sequence. This sequence was assembled from a
CC   random sampling of Illumina and LS454 reads representing a single
CC   population of the 1000 Genomes Project
CC   (http://www.1000genomes.org/), using cortex_con
CC   (http://cortexassembler.sourceforge.net/).
CC   ##Metadata-START##
CC   1000 Genomes Population :: CEU
CC   Target                  :: AJ271735.1
CC   Target Base             :: 146684
CC   Target Base             :: 146772
CC   Target Base             :: 147203
CC   Target Base             :: 147326
CC   Average Coverage        :: 14.32x
CC   Minimum Coverage        :: 4x
CC   Maximum Coverage        :: 29x
CC   ##Metadata-END##
CC   ##Assembly-Data-START##
CC   Assembly Method       :: cortex_con Beta 0.04c, April 2011
CC   Sequencing Technology :: Illumina GAIIx; 454
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..1272
FT                   /organism="Homo sapiens"
FT                   /chromosome="X"
FT                   /mol_type="genomic DNA"
FT                   /pop_variant="CEU"
FT                   /clone="WGS_CEU_AJ271735.1_146684_146772_147203_147326"
FT                   /db_xref="taxon:9606"
FT                   /bio_material="NA12878"
FT   misc_feature    323
FT                   /note="Region: Target update"
FT   misc_feature    411
FT                   /note="Region: Target update"
FT   misc_feature    842
FT                   /note="Region: Target update"
FT   misc_feature    965
FT                   /note="Region: Target update"
XX
SQ   Sequence 1272 BP; 422 A; 226 C; 233 G; 391 T; 0 other;
     aaccttattg attatattga gagcgctctt ctgattcaaa tgtaagcaaa ccactgatga        60
     ccactggtcc gtataacaca ttttaccaac agctccttca cactgaatcc tttaacttgg       120
     ccaaaggacc cttaaagaac atctagtcca atgtcaacat tttatagctg gagaaaggga       180
     tgcacagaga gggaaaataa cctgtccaaa gtcacacagt tctgaaaatt gagtggaatt       240
     atgactttat accagagttc ctaatttcca ggtatcttag cctcagtttc ttaaaaaata       300
     gagtttgaag caaaagctat gtacgatcca gggtagtatg agtaaggaaa gggttaatga       360
     gggagggaag aaagaagaac aaataaaaag catgtcactg agttggccac agtctgttcc       420
     ttggcaagct aatttcgcaa ttttttgtga cagaccatat aaaactacta catctccata       480
     cagcccacgt ggtggaggaa aggaggtgaa ttcatctgct agctctcatc tcattagtca       540
     aattcttccc catgtgatat ttacccttct acatttttgg gtagtgcgtg atgggcactt       600
     aaatatgtac cttggcattt catgcttcag caataatggg aaggattgtg gctccactat       660
     aaacagtaag gcaagtatat gaatataggg agattaaatt taaagtgcta cactagggtg       720
     gtgcttttac cttatgtctt taatcacatt ccttcgaagt aagttagaga taacctacca       780
     cctttaaagt aaataaagct ttattgtggc tcttagaact gtactatgtt tgccttcctg       840
     aacctattta ttctctagct tgctttaaag ggcttctttt ttatatggaa attaattccc       900
     tgttcaatta aaggagtaac aaactctcaa aatatctttc ttcttaatat aaaaaggaat       960
     ttcatattat tgaactcctc aaaaagcatg tgtaagtcaa aatatgtatg tgaaggcaca      1020
     tatgttcttt taggttccat gagcataata gcaggaaaac tggttaagtc aataaatgct      1080
     ggggaaaaaa tggctaaaca aggtattctg taacatgaaa ataaagcaat gagttggttg      1140
     gctggctttt taaaaaatat ttcagccact aattatgaca cagacacatt ataagaatta      1200
     tgctaccttt tattcacata tacaatagtt ccctgtgtcc tatagatcat tgtcacataa      1260
     agcaaaagca tt                                                          1272
//


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