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EBI Dbfetch

ID   KF457589; SV 1; linear; genomic DNA; STD; HUM; 386 BP.
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AC   KF457589;
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DT   30-JUL-2013 (Rel. 117, Created)
DT   18-SEP-2013 (Rel. 118, Last updated, Version 2)
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DE   Homo sapiens chromosome 3 WGS contig WGS_RP11_AC090958.3_63771 genomic
DE   sequence.
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KW   ASSEMBLY_CORRECTION.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-386
RG   Genome Reference Consortium
RA   ;
RT   ;
RL   Submitted (16-SEP-2013) to the INSDC.
RL   NCBI, NIH, Bethesda, MD 20892, USA
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DR   MD5; 49d7b1bc3be284d4456460096c405367.
DR   ENA-CON; GL000033.
DR   ENA-CON; JH636055.
DR   Ensembl-Scaffolds; KF457589.1:1-386; homo_sapiens.
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CC   This sequence was generated to audit a questionable region in the
CC   reference genome sequence. This sequence was assembled from
CC   Illumina reads representing the individual whose DNA was also the
CC   source of the RP11 BAC library (BioProject Accession: PRJNA189425;
CC   SRA run accession: SRR834589). Assembly was performed with
CC   cortex_con (http://cortexassembler.sourceforge.net/).
CC   ##Metadata-START##
CC   BioSample        :: SAMN01921690
CC   Target           :: AC090958.3
CC   Target Base      :: 63768
CC   Average Coverage :: 36.39x
CC   Minimum Coverage :: 4x
CC   Maximum Coverage :: 57x
CC   ##Metadata-END##
CC   ##Assembly-Data-START##
CC   Assembly Method       :: cortex_con Beta 0.04c, April 2011
CC   Sequencing Technology :: Illumina MiSeq
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..386
FT                   /organism="Homo sapiens"
FT                   /chromosome="3"
FT                   /mol_type="genomic DNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /clone="WGS_RP11_AC090958.3_63771"
FT                   /db_xref="taxon:9606"
FT                   /bio_material="SRR834589"
FT   misc_feature    192
FT                   /note="Region: Target update"
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SQ   Sequence 386 BP; 102 A; 97 C; 84 G; 103 T; 0 other;
     gctcaaccga tcctcccatc tcagcctccc cagtagctgg gactatagac aagcaccatc        60
     atgctctttt aattttttgt agagatgggg tctcactatg ttgcccaggc tggtcttgaa       120
     ctcctgggct caagcaatct tcctgcctta gcttcccaaa gtgctggtat tacaggtgtg       180
     agccaccact tccagtaact ttattttcta tgtagaaaaa tcactaagag gccaagcgtg       240
     tggttcatgc ctgtaacccc agcactttgg gaagctgagg caggaagact gctcaaaccc       300
     aggagtttga gaccagcctg agcaacatag taagacccca tctccacaaa aaaatttaaa       360
     aattaattga gtgtggtgtg tgctgt                                            386
//


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