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EBI Dbfetch

ID   KF454944; SV 1; linear; genomic DNA; STD; HUM; 428 BP.
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AC   KF454944;
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DT   30-JUL-2013 (Rel. 117, Created)
DT   18-SEP-2013 (Rel. 118, Last updated, Version 2)
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DE   Homo sapiens chromosome 3 WGS contig WGS_RP11_AC090958.3_45656_45676_45697
DE   genomic sequence.
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KW   ASSEMBLY_CORRECTION.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-428
RG   Genome Reference Consortium
RA   ;
RT   ;
RL   Submitted (16-SEP-2013) to the INSDC.
RL   NCBI, NIH, Bethesda, MD 20892, USA
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DR   MD5; 86927445b99ff908c4c9cfcaadb46202.
DR   ENA-CON; GL000033.
DR   ENA-CON; JH636055.
DR   Ensembl-Scaffolds; KF454944.1:1-428; homo_sapiens.
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CC   This sequence was generated to audit a questionable region in the
CC   reference genome sequence. This sequence was assembled from
CC   Illumina reads representing the individual whose DNA was also the
CC   source of the RP11 BAC library (BioProject Accession: PRJNA189425;
CC   SRA run accession: SRR834589). Assembly was performed with
CC   cortex_con (http://cortexassembler.sourceforge.net/).
CC   ##Metadata-START##
CC   BioSample        :: SAMN01921690
CC   Target           :: AC090958.3
CC   Target Base      :: 45662
CC   Target Base      :: 45683
CC   Target Base      :: 45703
CC   Average Coverage :: 51.61x
CC   Minimum Coverage :: 4x
CC   Maximum Coverage :: 76x
CC   ##Metadata-END##
CC   ##Assembly-Data-START##
CC   Assembly Method       :: cortex_con Beta 0.04c, April 2011
CC   Sequencing Technology :: Illumina MiSeq
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..428
FT                   /organism="Homo sapiens"
FT                   /chromosome="3"
FT                   /mol_type="genomic DNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /clone="WGS_RP11_AC090958.3_45656_45676_45697"
FT                   /db_xref="taxon:9606"
FT                   /bio_material="SRR834589"
FT   misc_feature    197
FT                   /note="Region: Target update"
FT   misc_feature    218
FT                   /note="Region: Target update"
FT   misc_feature    238
FT                   /note="Region: Target update"
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SQ   Sequence 428 BP; 187 A; 68 C; 68 G; 105 T; 0 other;
     atacaccagt gttcatacaa catatccaaa aacatgttgc tctctgcaaa gcagttgcct        60
     tagtgaatat tgatctccgt gtgagaaagg cctttaaaag tatacaagca aagacagatc       120
     tgtagagaaa gagatttata tatccaacta caatgaaagt aaaaaaatat aatttaaaaa       180
     accattaaag attgaaaagc aaatgacaaa tgagagaagg caaaatatat aacatacaaa       240
     ggttaggttt ctttagtaca taagcagtcc tcacacaaac atttaaaaga taaatacttc       300
     aatatgaaaa taagcaaaag tcatgaacag gcaacccata aaagaataaa tacaaaaaac       360
     aaataagtat attaaaaagt tccatctggt ggggtgtggt ggctcacacc tgtaatctca       420
     gcactttg                                                                428
//


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