spacer

EBI Dbfetch

ID   KC877984; SV 1; linear; genomic DNA; STD; HUM; 571 BP.
XX
AC   KC877984;
XX
DT   11-APR-2013 (Rel. 116, Created)
DT   15-MAY-2013 (Rel. 116, Last updated, Version 2)
XX
DE   Homo sapiens chromosome X clone WGS_CLM_AJ271735.1_145083 genomic sequence.
XX
KW   ASSEMBLY_CORRECTION.
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-571
RG   Genome Reference Consortium
RA   ;
RT   ;
RL   Submitted (09-APR-2013) to the INSDC.
RL   NCBI, NIH, Bethesda, MD 20892, USA
XX
DR   MD5; 046dfb3dfdc4e3b8bf5d40c6356b7374.
DR   ENA-CON; GL000190.
DR   ENA-CON; GL000172.
XX
CC   This sequence was generated to audit a questionable region in the
CC   reference genome sequence. This sequence was assembled from a
CC   random sampling of Illumina and LS454 reads representing a single
CC   population of the 1000 Genomes Project
CC   (http://www.1000genomes.org/), using cortex_con
CC   (http://cortexassembler.sourceforge.net/).
CC   ##Metadata-START##
CC   1000 Genomes Population :: CLM
CC   Target                  :: AJ271735.1
CC   Target Base             :: 145083
CC   Average Coverage        :: 138.11x
CC   Minimum Coverage        :: 20x
CC   Maximum Coverage        :: 233x
CC   ##Metadata-END##
CC   ##Assembly-Data-START##
CC   Assembly Method       :: cortex_con Beta 0.04c, April 2011
CC   Sequencing Technology :: Illumina GAIIx; 454
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..571
FT                   /organism="Homo sapiens"
FT                   /chromosome="X"
FT                   /mol_type="genomic DNA"
FT                   /pop_variant="CLM"
FT                   /clone="WGS_CLM_AJ271735.1_145083"
FT                   /db_xref="taxon:9606"
FT   misc_feature    290
FT                   /note="Region: Target update"
XX
SQ   Sequence 571 BP; 133 A; 130 C; 121 G; 187 T; 0 other;
     gtaacctctt atgttgcttt cagatccttc aattttaagt aactttttaa tcttacaagt        60
     ctgcttgatt gtactttaca cttatctacc ctgaaaagct ctgcccagtt ctctgggtca       120
     agctggatgg tgatgagtag caacacacac ttctctgctt ctgcctgaaa tgtgcttaga       180
     gctcagttat ctaaggattc tctgacacta gtgcattgtt cctggagcta aattattcta       240
     tggatgtttg cttattagtt tcaggcccca aaataacacg agcccctcct ccttgatagc       300
     tccttgatat cccaatcttg cagtcctaac tcaggcaaat tgtgcactgc cagaggggcc       360
     ctgggttctg ccatataccc agaggagcct ttctcagtgt gtttctaaat ggccttacac       420
     ttggtagaag aaattgaagg gttactcaaa tacagttgca atctgcaatc tgctgttgag       480
     tcagggcttt cacttgtgtc caagttggcc tgatatggac tgcatctgct ttacgtatag       540
     atgggtcctg ttgggatatg cgcatggacg t                                      571
//


spacer
spacer