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EBI Dbfetch

ID   KC877650; SV 1; linear; genomic DNA; STD; HUM; 534 BP.
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AC   KC877650;
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DT   11-APR-2013 (Rel. 116, Created)
DT   15-MAY-2013 (Rel. 116, Last updated, Version 2)
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DE   Homo sapiens chromosome 17 clone WGS_JPT_AC015938.17_116090 genomic
DE   sequence.
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KW   ASSEMBLY_CORRECTION.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-534
RG   Genome Reference Consortium
RA   ;
RT   ;
RL   Submitted (09-APR-2013) to the INSDC.
RL   NCBI, NIH, Bethesda, MD 20892, USA
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DR   MD5; 1b63c0a0f559a503c0a2913f9f06fe1e.
DR   ENA-CON; KI270857.
DR   Ensembl-Scaffolds; KC877650.1:1-534; homo_sapiens.
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CC   This sequence was generated to audit a questionable region in the
CC   reference genome sequence. This sequence was assembled from a
CC   random sampling of Illumina and LS454 reads representing a single
CC   population of the 1000 Genomes Project
CC   (http://www.1000genomes.org/), using cortex_con
CC   (http://cortexassembler.sourceforge.net/).
CC   ##Metadata-START##
CC   1000 Genomes Population :: JPT
CC   Target                  :: AC015938.17
CC   Target Base             :: 116090
CC   Average Coverage        :: 149.83x
CC   Minimum Coverage        :: 21x
CC   Maximum Coverage        :: 212x
CC   ##Metadata-END##
CC   ##Assembly-Data-START##
CC   Assembly Method       :: cortex_con Beta 0.04c, April 2011
CC   Sequencing Technology :: Illumina GAIIx; 454
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..534
FT                   /organism="Homo sapiens"
FT                   /chromosome="17"
FT                   /mol_type="genomic DNA"
FT                   /pop_variant="JPT"
FT                   /clone="WGS_JPT_AC015938.17_116090"
FT                   /db_xref="taxon:9606"
FT   misc_feature    261
FT                   /note="Region: Target update"
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SQ   Sequence 534 BP; 121 A; 149 C; 144 G; 120 T; 0 other;
     ccctgttttg cagactttag aataggcagg agccaccccg cctctcccag aatggcctag        60
     ttctcaccgt ctctatttga gactcattga ttgattattg atggatgtat ttgtggtctg       120
     gctctggggc ctcttggcca ggccctgggc aaggacaaga atggggatga ggtgggggtc       180
     ttccaacccc aggaaaggcc ctcaggctgc ctcccccaac ccccagcatc cctgcttctg       240
     gcctccaccc ctgccaactt ccctccgccc ctggatttaa agtcacagtg acgattaatc       300
     acccaatgac atggagggca ggctgcagag gagttaatta attagggaaa tttctcctgg       360
     ccctttgaag gtgaaatgtg tggggagggg acaaggccag ggacagatat tattcaagct       420
     gaacaagctg actctgggag gcttcgagaa caactccagg ggagctttga aaggatggag       480
     acctcaccag ggtagcctgg accccgccta agactgcccc tcttagccca gctc             534
//


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