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EBI Dbfetch

ID   KC877642; SV 1; linear; genomic DNA; STD; HUM; 543 BP.
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AC   KC877642;
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DT   11-APR-2013 (Rel. 116, Created)
DT   15-MAY-2013 (Rel. 116, Last updated, Version 2)
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DE   Homo sapiens chromosome 17 clone WGS_JPT_AC015938.17_57609 genomic
DE   sequence.
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KW   ASSEMBLY_CORRECTION.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-543
RG   Genome Reference Consortium
RA   ;
RT   ;
RL   Submitted (09-APR-2013) to the INSDC.
RL   NCBI, NIH, Bethesda, MD 20892, USA
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DR   MD5; 17bf2902b3b9269b4273e01998a679ec.
DR   ENA-CON; KI270857.
DR   Ensembl-Scaffolds; KC877642.1:1-543; homo_sapiens.
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CC   This sequence was generated to audit a questionable region in the
CC   reference genome sequence. This sequence was assembled from a
CC   random sampling of Illumina and LS454 reads representing a single
CC   population of the 1000 Genomes Project
CC   (http://www.1000genomes.org/), using cortex_con
CC   (http://cortexassembler.sourceforge.net/).
CC   ##Metadata-START##
CC   1000 Genomes Population :: JPT
CC   Target                  :: AC015938.17
CC   Target Base             :: 57609
CC   Average Coverage        :: 157.44x
CC   Minimum Coverage        :: 30x
CC   Maximum Coverage        :: 211x
CC   ##Metadata-END##
CC   ##Assembly-Data-START##
CC   Assembly Method       :: cortex_con Beta 0.04c, April 2011
CC   Sequencing Technology :: Illumina GAIIx; 454
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..543
FT                   /organism="Homo sapiens"
FT                   /chromosome="17"
FT                   /mol_type="genomic DNA"
FT                   /pop_variant="JPT"
FT                   /clone="WGS_JPT_AC015938.17_57609"
FT                   /db_xref="taxon:9606"
FT   misc_feature    273
FT                   /note="Region: Target update"
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SQ   Sequence 543 BP; 176 A; 86 C; 126 G; 155 T; 0 other;
     aatttttaca attatatttt aaaaaaagaa ataaagaaat aaaaagaaaa gctatttgcc        60
     ctctaaaaaa gaggattcat ccaagggctt tttttaagta ggagagcttc tctgggcatt       120
     tcagtgctta atttaatggg gtctgcaggg ggtggagtga gggtagcata atttatgggt       180
     cacctgctgt gtgccaagct ctttatgacc ctgcagagca gatattatta tcccatttta       240
     tagataagga aactgagtat caggttcaac acatttgctt attcaacact atttattgag       300
     tcctgttctg tgctaggaac caatgcaggc tccagggaat cagatatata taaataaagt       360
     ccttgccctc acagcgcttg cattctcatg gggagagata ggtaataaac aagtgaatga       420
     ataagtgaac aaatctttga gagaatgtca tgttataagt gcttagaagg aaataaacgg       480
     ggtgataaga gagggctagg gtccctaatg tagatctgga agcatctggg gatcccctga       540
     gcc                                                                     543
//


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