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EBI Dbfetch

ID   KC877185; SV 1; linear; genomic DNA; STD; HUM; 560 BP.
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AC   KC877185;
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DT   11-APR-2013 (Rel. 116, Created)
DT   15-MAY-2013 (Rel. 116, Last updated, Version 2)
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DE   Homo sapiens chromosome 8 clone WGS_JPT_AC129915.6_139943 genomic sequence.
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KW   ASSEMBLY_CORRECTION.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-560
RG   Genome Reference Consortium
RA   ;
RT   ;
RL   Submitted (09-APR-2013) to the INSDC.
RL   NCBI, NIH, Bethesda, MD 20892, USA
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DR   MD5; 9370224eca14f671f41c8cfb341f9960.
DR   ENA-CON; KI270812.
DR   ENA-CON; GL000062.
DR   Ensembl-Scaffolds; KC877185.1:1-560; homo_sapiens.
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CC   This sequence was generated to audit a questionable region in the
CC   reference genome sequence. This sequence was assembled from a
CC   random sampling of Illumina and LS454 reads representing a single
CC   population of the 1000 Genomes Project
CC   (http://www.1000genomes.org/), using cortex_con
CC   (http://cortexassembler.sourceforge.net/).
CC   ##Metadata-START##
CC   1000 Genomes Population :: JPT
CC   Target                  :: AC129915.6
CC   Target Base             :: 139943
CC   Average Coverage        :: 129.40x
CC   Minimum Coverage        :: 20x
CC   Maximum Coverage        :: 190x
CC   ##Metadata-END##
CC   ##Assembly-Data-START##
CC   Assembly Method       :: cortex_con Beta 0.04c, April 2011
CC   Sequencing Technology :: Illumina GAIIx; 454
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..560
FT                   /organism="Homo sapiens"
FT                   /chromosome="8"
FT                   /mol_type="genomic DNA"
FT                   /pop_variant="JPT"
FT                   /clone="WGS_JPT_AC129915.6_139943"
FT                   /db_xref="taxon:9606"
FT   misc_feature    293
FT                   /note="Region: Target update"
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SQ   Sequence 560 BP; 211 A; 91 C; 87 G; 171 T; 0 other;
     attaacaagc ttatattatg tcaaaggctg aaataaaagt agtcctacaa aagattccaa        60
     acctacttaa aatttacgtc ttattctgca aattgcatgc cttaagtgcg ggaaggatgt       120
     ggcatttatg ccatctcagt gcaaaataat atgggccaaa ctgcaaatca gtacttaaat       180
     gggaaaaaat cacttatcaa ttgaaaatag aatcggttat aaagtagtag gaaaatagtt       240
     aatggtaaag ttgtctatta agtatttata tgaagtaatt atacagtcac ttgaatggtt       300
     ctccacagtt atgcttaaat aaaatgatat tgaacatcaa acgataaatt attctatgta       360
     agcataatgc tatgtctcac aaaataacac tcacctagtc ccataaattt aaacttaact       420
     ataggtgttg gtgtcatttc gaggaaacaa attattttga aaaattgtat cattccagga       480
     agtacagcca tgaagaactc acccaaggtc gttttccatc atttaattta gttcagattc       540
     aaaaacggtc ccaccacata                                                   560
//


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