Dbfetch
ID CT573298; SV 1; linear; genomic DNA; STD; PLN; 11681 BP. XX AC CT573298; XX DT 25-JAN-2006 (Rel. 86, Created) DT 19-DEC-2014 (Rel. 123, Last updated, Version 9) XX DE S.lycopersicum DNA sequence from clone LE_HBa-119A16 on chromosome 4 XX KW HTG. XX OS Solanum lycopersicum (tomato) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; OC Lycopersicon. XX RN [1] RP 1-11681 RA McLaren K.; RT ; RL Submitted (11-APR-2007) to the INSDC. RL Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK. RL E-mail enquiries: vega@sanger.ac.uk Clone requests: RL clonerequest@sanger.ac.uk XX DR MD5; eb1840cda311ae83625609121e0d9b44. XX CC -------------- Genome Center CC Center: Wellcome Trust Sanger Institute CC Center code: SC CC Web site: http://www.sanger.ac.uk CC Contact: vega@sanger.ac.uk CC -------------- CC CC This sequence was finished as follows unless otherwise noted: all regions CC were either double-stranded or sequenced with an alternate chemistry or CC covered by high quality data (i.e., phred quality >= 30); an attempt was CC made to resolve all sequencing problems, such as compressions and repeats; CC all regions were covered by at least one subclone; and the assembly was CC confirmed by restriction digest, except on the rare occasion of the clone CC being a YAC. CC CC The following abbreviations are used to associate primary accession CC numbers given in the feature table with their source databases: CC Em:, EMBL; Sw:, SWISSPROT; Tr:, TREMBL; Wp:, WORMPEP; CC Information on the WORMPEP database can be found at CC http://www.sanger.ac.uk/Projects/C_elegans/wormpep CC CC LE_HBa-119A16 is from a Lycopersicon esculentum library CC VECTOR: pBeloBAC11-HindIII CC CC TOMGEN XX FH Key Location/Qualifiers FH FT source 1..11681 FT /organism="Solanum lycopersicum" FT /chromosome="4" FT /cultivar="Heinz 1706" FT /mol_type="genomic DNA" FT /clone_lib="LE_HBa" FT /clone="LE_HBa-119A16" FT /db_xref="taxon:4081" XX SQ Sequence 11681 BP; 3419 A; 1970 C; 2495 G; 3797 T; 0 other; tagaggtcgt gggaggacat cctctagggg aagaggacaa gcgcccgtcc catctagtac 60 tagggcggtg actcctccac cgactaaaga agtagtaaga gagggtgagg aaggggaaac 120 tgagcaagtg cagaatgagg aactaccacc ccaacctacc ccagagatga taaatcaggt 180 ccttacttat cttagtgggt tatctgatca aggtcaaaca cctccagtgt tttctgcacc 240 agcacctcag gctctggagg tacaacatgc ggctactatg gctccccgca tggatgcctc 300 attggaaata ggtacgtttc ctcgtctgac tacagggccg ataatgacaa atgatcagca 360 tgaacttttc agtaagttct tgaaattgaa acctccagtc ttcaagggtg ctgaatctga 420 ggatgcctac gattttttgg ttaactatca tgagctacta cacaagatgg gtatagtaga 480 acggtttggt gttgagtttg tgacttatca gtttcaaggg aacgccaaaa tgtggtggcg 540 gtcacatgtt gagtgtcaac caacagaggc accacctatg acttgggcat cattctctag 600 cttgtttatg gagaagtata tcccccggac tttgagggat atgaaaagag atgaattttt 660 gagcctagag caaggtagga tgtcggttac tgcatatgag gctaagtttc gtgcattatc 720 ccggtatgcc acccaactat gtttcagtct acaagagcgg attcactgtt ttgtgaaggg 780 gttgtgatca gagttgcgga tttcagcctt acaggtagca actacagcga aatcttttca 840 aaaagtggta gacttcgtga tagaggtaga ggaagtgaag ccagattact tcaccatggc 900 aactacatca aaaaggtttc gaaagggagg tgagtttaat ggttcttact ctagaggaca 960 gggttcagga ggttactcag tctgaccaat tcagtcttca ctacagactg tagttggggg 1020 tccacctcag accggtcaac acttctctga gagaactatg cttgaatcca gaaagtgtta 1080 tggatgtggg gagactggac acattaagag gtattgtcca aaacagagtt acagacctcc 1140 aaatgttaga ggtagaggtg gttatggaag aggccgtcat tctggaggac gcggtggtcg 1200 aggtaatggt ggtcaccaaa acggccgggg tgatgggcaa actggagcca ctacatcaca 1260 acatggtagg ggcaacggac agacaggtga gagggcccat tgttacgctt tccctgggcg 1320 gtcggaagcg gagacatcag atgctgttat cacaggtaat cttttggttt gtgattgtat 1380 ggcttctgta ttatttgacc ctggatccac attttcttat atatcttcct catttgctaa 1440 tggtcataat ttacattgtg aattgcttga catgcctatt cgtgtttcta ctccggtggg 1500 tgagtctgtg atagttgaaa aagtatatag gtctggtctg gtgacttttg tggggagcaa 1560 tacttatgta gacttggtta tcttagaaat ggtggatttt gatgtaattc tgggtatgac 1620 ttggctttct ccgaattttg cgatcttgga ttgcaatgct aaaaccgtga cgttagccaa 1680 gcctggtaca gatccattag tgtgggaggg tgactacact tccaatccgg ttcgtattat 1740 ctcctttctt cgtgctaaga aaatggttag taagggttgt ttagcgttct tggcacacct 1800 ccgagatgat actacccaag tacctccaat tgagtcggtt tcggtagtcc gtgagtttct 1860 ggatgtgttc cctgcagatc ttcctggtat gccaccagat agggatattg acttctgcat 1920 tgatcttgaa ccgggtactc gccccatttc tataccccct tataaaatgg ctcccgcgga 1980 gttaagagag ttaaaagctt aacttcaaga gttgttaagc aaaggcttca ttagaccaag 2040 tgcatcccct tgggaagctc cagtgttatt tgtgaagaag aaggatggga gttttcggat 2100 gtgcataaac taccggcagt tgaacaaggt aactattaag aacaagtatc ccattcctcg 2160 cattgatgac ttgttcgatc agttacaagg tgcttgtgtc ttctctaaga ttgacttgag 2220 gttcggttat catcaattga agatactggc aatggatgtg ccaaaaactg cttttcggac 2280 caggtatggg cattacgaat ttgtagtgat gtcttttggt cttacgaatg cccctgctgc 2340 tttcatgagc ttgatgaacg ggatttttaa gccatatctg gatctctttg tgatcgtatt 2400 tattgatgat atattggtat actcaaagag caagaaggaa cacgagaagc acttgagaat 2460 tgtattggaa atgttgaggg agaaaaagct ttatgccaaa ttctccaagt gtgagttttg 2520 gctagatgca gtgtccttct tggggaatgt ggtttctaag gatgaggtga tggtctatcc 2580 ttctaagatt gagacagtaa agaattgggt aagacctact aatgtgtcag aaataaggag 2640 ctttgttggt ttagctagct attaccgtcg atttgtcaag ggattctctt ccattgcttc 2700 ccaattgacg aacttgacta aacagaatgt tccatttgta tggtcggacg aatgtgagga 2760 aagctttcag aaactcaaga ccttgttgac tactgcacta atccttaccc tgccagtgga 2820 aggtaagcat ttcatcgtct attgtgatgc atcctattcg ggtttgggtg cagtgctaat 2880 gcaagagaag aacgtaattg cttatgcttc aaggcaatta aatgtgcacg aaggtaatta 2940 tccgacccat gatttggaat tagctgcggt agtgtttgcc ttaaagcaat ggaggtacta 3000 tctatatggg gttaagtgtg aagtatacac ggatcatcgt agcctacagt atgtgtttac 3060 tcaaaaagat ttgaatttga gacagaggag atggatggaa ctactgaagg actacgatat 3120 cactatcttg tatcatccgg gaaaggctaa tgttgtggca gacaccttaa gtagaaaggc 3180 aagaagcatg ggaagcctgg ctcacttgca agtttctaga cgtccattgg ctagagaggt 3240 tcagactctg gctaacgact tgatgaggtt agaagtaaat gagaagggag gattgttggc 3300 ttgtgtggag gcaagatctt cttttcttga caagattaag ggaaaatagt ttgatgatga 3360 gaaactaagc agaatccaag ataaagtatt gcgaggagag gctaaggaag cgcaaatcga 3420 tgaggaaggt gttttgagaa tcaagggaag ggtatgtgta ccccgcgttg atgatttgat 3480 aaacactatt ctggcagaag ctcatagttc aaggtactct atacatcctg gtgcaaccaa 3540 gatgtaccgt gacctaaagc aacacttttg gtggagtaga atgaagcgcg acattgttga 3600 ttttgttgcc aaatgtccaa attgtaagca agtaaagtat gaacaccaga ggcctagagg 3660 aacacttcag agaatgccca ttcctaaatg gatgtgggag agaattgcaa tggacttcgt 3720 ggttggtctt caaaagacaa tgagtaagta tgactccatt tgggtgattg tcgataggtt 3780 aacgaagtct gctcacttca ttccggtcaa ggtgacttat aatgcagaga agttagccaa 3840 aatttacatc tcagaaattg ttcgattgca tggagttcca ctctccatca tatcagatag 3900 aggtacgcag tttacttcta agttttggag aacattgcat gctgaattag atactaggtt 3960 ggaccttagt actgcattcc atcctcagac cgatggttag tctgagcgaa cgattcaagt 4020 gttggaggat atgcttcgtg catgtgtgat agaatttgga gttcattggg ataacttctt 4080 acccttagcg gagttctcct acaacaatat ctatcactca agtattgata tggccccatt 4140 tgaagcactg tatggaagga gatgtaggtc tcccatcggt tggtttgatg tatttgaggt 4200 tagaccttgg ggtattgacc ttttgaggga ttcattggag aaggtgaaat gtattcaaga 4260 aaagcttttg gcggcgcaaa gtaggcaaaa ggaatatgtc gttcgaaagg ttagagactt 4320 ggagtttatg gagtgtgaac aagtcttgtt gaaggtttcg cccatgaaag gggtgatgtt 4380 gtttggtaag ccaggtaaac ttagtccgag gtatattggt ccatttgaag ttttgaagcg 4440 cataggagag gtggcttatg agttagcctt gcctccggga ctgtacggag tgcatccggt 4500 atttcatgtg tctatgtgaa aaagatacca tggggatgga aactacatca ttcgttggga 4560 tttagtgctg cttgatgaaa atttgtctta tgaggaggag tctgttgcta ttttagatag 4620 agaagttcgc aagctgaggt caagggagat tgcatccatc aaagttcaat ggaagaatcg 4680 acccgttgaa gaagccactt gggagaaaga ggttgatatg caagaaagat acccccacct 4740 gtttacagat tcaggtactt cttttcgccc ttgttttctt cttatgatcg ttcgaggacg 4800 aacaatgggt aaattggtat ctattgtaac gacctgttta gtcgttttga gcaacagatg 4860 ttatttctgg aaaactggct gagacgacgg atcccacgac ggaccgtcat gggcacaacg 4920 gaccgtcaag ggggtctcgt ttcaaaacac ttagaaattc tgaaatttgg gtactgaaat 4980 caactctctg aacttcgtga caaaagtgca ggatggaccg tcacaggcat gacgggccgt 5040 cacagggtct taaataaaaa gtgagtctct gaactctgtg acggagcagc aggacagacc 5100 gtcgcaggca cgacggcccg tcacaggctg cgtaatccca agcgaggtcg gatttcttta 5160 aatattttaa gggacgtttt ggactattcc tgctataatt ataaagttag tggtttaata 5220 ttaataactc aattacttgg gggttaaaag aggtaacctt gagttaatta gtgggttaag 5280 tcctcatctt ttatacttaa ttatatgcta attagggtaa aagaaagatg gtttgaataa 5340 gaaaaataga aagaacaaga tagggaaaaa tgattgctag agagagacga acgaagagga 5400 aaaacaaaag cttgggaaat ttgcttgctg gatcaaaatt cttcggtgga ggtaggttat 5460 ggtttttata ctattcgtag taaactctta atagagaatg atatgtattg ggtagtgttg 5520 taaacccttc tatatgctta attatgtgtt tgcatgttgt gattatatga ttgagataaa 5580 ataagcatga tgaagctatg aatcctaaat cttgaaaaag aaatcctaat ctactttgtt 5640 aatgatgatg ccttggtata aaagaaggct tgatgaatta aagtagtgag attaggggat 5700 cgggtgccac gttccggtac caggatagta tatgaggatc ggagtgtcac attccgacac 5760 caggatagta tatggatcgg gtgccacgtt ccggtaccag gatagtatat gaggatcgga 5820 gtgtcacgtt ccgacaccag gatagtatat ggatcgggtg ccacgttccg gtaccaggat 5880 agaatatgga tcgggtgtca cgttttgaca ccaggataga atgaggatcg gagtgtcacg 5940 ttctgacact aggatagtac atgaggagcg gagtgtcacg taccgacacg agaggaataa 6000 agataatgaa tcttgaaaga tgttaatata ttcaatctaa tgaacctaat tcccaaatga 6060 gtatgatgag gaggcgtgag tcctcattga tgtgcttggt gttgtaacca agggttatgg 6120 taattgtaaa tgctgcatgt tgagtattat agttgatttt atgatgttat ctaatatata 6180 ctgttttcta ttttgagttg gccgatgata cctactcagt acctgtgttt tgtagtgacc 6240 cctacttgta tgttttcttt ttgttcattg tggagtgcag caaacgtgcc gtcgtcttca 6300 actcaaccgc aactctagcc agtcttcatt actccggatt tcagggtgag ctaatgcttc 6360 tagcttggac tggatcttcc tcttcatgtc ttgatgcctt gaagttccgg catagactag 6420 ctttttatgt attttagctt cttagatact cttagattag taatttgagg atagatgttc 6480 ttgtgatgat gacttccaga ttttggggat aataatagtt gttgagcttt tagaagctat 6540 tgaattggtt tttattaatg agtttaagtc ttccgcatta ctttctgttg atattatatt 6600 gaaatgttaa ggtttagatt ggttggttcg ctcacatagg agggtaagtg tgagtgccag 6660 tcacgacccg atttgggtcg tgacacctaa tctgttagat cgatctcagt gcttataatg 6720 agacctttct tcagtactgt taattttagt aatagcagtt ggattctcag tgcaaagtgc 6780 aacatcaaga tctaaaactc cgagatggaa tttgatctgt tcgtaccaat ctgagaagtt 6840 aagaccttta aaggttgtaa cagaggcaga gtacaaatgt agagcaaatg atatgaatat 6900 aatatgctca tttgttaata ctttgagttg tgaattttaa acttattatc aaattcagaa 6960 atggtttaca aattcttaaa tgtatgtttg atgtcctcct ttgggtgaaa catcaaaata 7020 cagctttaga cataatgatg cttagatgtg aatttaactt aattcaataa ttttaatgtg 7080 tcaatcaata aaatatatca tctttgacta aataaataaa actaacgaca catccaaatt 7140 atctctttaa tgttcaatgg ttataagatg aaataatcaa tctttgggta atccataaat 7200 atgttagaac caaaaacttc aatatatccg taagtgttgt ataagttata agcataaaaa 7260 aatggataat taaatatatg tttagtcatt attattttga attaattctt caaagattag 7320 accattttgc tgattaactg atttcatata cgtaatttca aaataaaata catcatgata 7380 gtgaataatt atttcactta atactaccta ttaccatttt caaataagga aaacattaat 7440 tttatgaaaa gtcactagtt cttaaatcag gctctgatac cacatgttag gattttaatg 7500 attgtgaaaa cataaacaat ctatgcattc atgaatccta taaattattc atgatcttag 7560 aactatatga tttttacaca aatttattac tataataatt cagtcaagaa tacatacccg 7620 agtcaaccta gttatttttt aagaatctta actttaattg agcggaagcc tttttgtttt 7680 cattcttcaa aagttgttta tctctcttgc gttatacttt atgaatagtt ttgatggata 7740 agaccataac tttatggaag acagaggacc ctttaagata agattgtgtt taacatcatt 7800 cacacctttc catcatggtg agcagtggag ataatggata gttttaaaac taccaagtaa 7860 ctccctactt aatgggtaat tagaagagat aatgggtaaa gtgaaagact taatgggtgg 7920 ttggaagtta caaacttact tccccagttc tccacacatg tcagtaactt ctccaattat 7980 ctaattagaa tttgaattta attagtaatt aaatattaaa ctaaacaata ttaacgtgga 8040 ccataaaaat taacacacgt gggccataaa actaacaatc gatgcttgaa tgttatagat 8100 gaagagtact cctttttttt tgaaagtttt tgtgtactaa catagattaa gaaaaacttt 8160 attttgtcaa ttttaatgat ccctttctgc gggcttactt ttatgtaagt tgctttgttg 8220 ttccccttcc ttgtttgtct atatgtctgg atttgtattt ttattcggtc taattttcca 8280 tgttcttatt ctatatggtt ggaatctgtg ttttttccat atttataatg tgtttgtctg 8340 ttattggtaa ttatgcaaat tcattgaatt cttgtatatc tgttttttta atagctaggt 8400 tagctaaata atcttctatt gaattgtctt ctgaaaatat gtttgatttt atccttctgt 8460 gtctgcattt atttcattat gtcctcaatt atttttgcaa tttttcatga tatcctctat 8520 gtcatttgta tgatgttctt ttcaaataag agattttgaa atctcttcga tttccaaagc 8580 ttcttgaatt gttgtgggct ctgcttctat gtttgtgtca agtcctattt ctttagcttg 8640 agcagaccta atatcttcat catgtcgctg aaacagaact cctgcttttt tgcatttcac 8700 ttgatcaata tttggtgcct tcctctcaac attgtgatag tatattttag acttgtagaa 8760 tcctaatata ttaaccacct cagaccatgt ctttccaatt aggttaaaac ttaagttctt 8820 atcgttttca gccactagat gtttttttgt tacttgttgt atcagtcctt cgaagttaag 8880 ttgtcctcca tgcataatat gatttcgcct cttccataag ctccacatta tcaatgttgg 8940 tatagctcta aggaaaatcc taaacttgtt aggggcttca acatatacca ccaataattt 9000 atggtctgca ataggtttct accttctata tctacacttg cacatgaagg aaaatacctc 9060 catagatttt gggctataga agctgctaga tataggtgaa acattgtttc atttgttgtg 9120 tttcacaaca ccaacattta gaggttgata attttcattc tcttcaaatt accatcagtg 9180 gctaatgcaa acattcgttt ctccatttac ataattgttt gtcgtgatcg aatacacgac 9240 tcatttgata tattttaaaa aaataatttc ttcatagtca tgctaaatca caagaacttc 9300 aagaaaaaaa ttatttattt gtatcaaatt acaaaactac ggcttataga ttttcttatt 9360 tgttaatcat gcgacattgc ataatctgca tactattttt ttagttgtgg tacttcacac 9420 aacaagcttt aatcgaaatg tcgcaacaaa gtaattaaag tgtaaagtta agaatgttta 9480 ttgagattaa atttgtaatt atgcttaatt aatcaggttg ttagaatagt tagttagctg 9540 tcaaaaatca gttagttagt tagttttcat tttcagaaag ttagttagat attttctgct 9600 ttagttgtta tataaatact gcacattcat gtttctgttc tcaatgaaaa tagcacacat 9660 tttcaatgct cttctctgat caagctttca tattctcatc aatggaggtt ttcaatcatc 9720 ttcaacatta acatggtatc agagtgagga cgtttctgat ctttcctgct tctttctttt 9780 tcaattttcg catcagatct tcatatttca ttctctgtaa accttcgaat tttctttgtg 9840 ataaaaatgg tagatcctac ttctacgagc actggttcag ccagtattcc ttcatctggg 9900 actgatacag ggagtcattt ctacagtcat cctcagataa tcttggagca gtacttgtac 9960 cagttccttt taatagtact ggttttcatt catggcgtcg tagtgtactt cattctttgt 10020 cagtgaagaa caaactagtg ttcatcaatg gtgagtgtaa gagaccagag gtgaatcatt 10080 ccacttatca tcaatgggtg aggtgtgatg atatggttac ttcctggatt ctcaactctc 10140 tgtatcgaga tattgttgat agtgttgaat atgtcaatga tgctctggaa ttgtggacag 10200 aactggagga tcgatatgat cagacaaatg gagcaaaatt ttaccaaact cagaaggaaa 10260 taaatgatct taatcaaggt attctcgata tcacaatata ttacactcct atgaagaaac 10320 tttgggagga attcaacagt atatgtgttt taagttagtg taattgtgtg tgtgtgtgga 10380 gctaaaacta atgttcagaa ggcggagaaa gataggcgtt tgattcagtt tttgatgggc 10440 ttaaatgtgg tatatactat tattagggga agtattttga tgatgaatcc cttaccatct 10500 ttggcacaag cttttgcttt actagtacaa gaggaaaagc aacgagaatt caaacccaat 10560 aatcaactgt ttactgaaag tagttctcta tctgcagttt catcaagttc aggaggtaga 10620 aattttcaaa caaattattc tacctccaac acaaaaccaa gaggaaggcc tttttgtgat 10680 ttttgtagaa ggccaggaca ttttagagca aagtgttata agttgcatgg ttatccatct 10740 aatgacacaa atagttataa tacaaatcag catcaaaatg gttatattcg tgatcagcat 10800 aatccaagga acacagttca aaatacttat ccaaatccaa ggcataacaa taagggaaag 10860 ggtgcatcag caaattctgt aagaatatcc tgtgatggag gtgttagtgg gcagacaaag 10920 gaatcaggtt caaccttttg taatgatcct caaggaaatg agaatatcag tatcaccaag 10980 gagcaatatg atcaagtttc tcacttgcta aatcagttcc aagattgtaa cactatggtc 11040 aatcaaaatg atggagtatg tggagctgtg aactttgcag gtgcctttgc ttgttccttc 11100 tctcttgatt atattaaact ttcatgtgaa tgtttcaaaa caaggactga tctatggatt 11160 ctagactcag gagctgctca tcacatgact tttaacaaaa ataaccttgt gaatatagta 11220 aatctacctt gtcctatgtt agtcagatta ccaaatggat atagagtcaa aatcacaatg 11280 gttggtaatg tacatcttac acctaaaatc attctgtccg agtattgtat gccccttctt 11340 ccaaatacaa tttaatctcc atcaactctc ttgtaaacca ccttaaatgc actgtctctt 11400 tttctaacac ttcttgtctg ctgcagcccc ttcactgaag aggcctctgg agattggtaa 11460 gatgcatgat ggtctttact tcctttgctc aaattgctta caaaagaact cacatgatca 11520 acaacaatac cattcttctt ctttttttat tttatccagt aataaagtac aatgtacatc 11580 ccttacatgt aactctcatt caaatgcaat aaacttttct tttgttggta ataaagataa 11640 tgttgctgaa cagttctttc agttctaatt cctttcctaa t 11681 //