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EBI Dbfetch

ID   CT573298; SV 1; linear; genomic DNA; STD; PLN; 11681 BP.
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AC   CT573298;
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DT   25-JAN-2006 (Rel. 86, Created)
DT   03-MAR-2009 (Rel. 100, Last updated, Version 8)
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DE   S.lycopersicum DNA sequence from clone LE_HBa-119A16 on chromosome 4
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KW   HTG.
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OS   Solanum lycopersicum (tomato)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae;
OC   asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum;
OC   Lycopersicon.
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RN   [1]
RP   1-11681
RA   McLaren K.;
RT   ;
RL   Submitted (02-MAR-2009) to the INSDC.
RL   Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK.
RL   E-mail enquiries: vega@sanger.ac.uk Clone requests: Geneservice
RL   (http://www.geneservice.co.uk/) and BACPAC Resources
RL   (http://bacpac.chori.org/
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DR   MD5; eb1840cda311ae83625609121e0d9b44.
XX
CC   Genome Center
CC   Center: Wellcome Trust Sanger Institute
CC   Center code: SC
CC   Web site: http://www.sanger.ac.uk
CC   Contact: vega@sanger.ac.uk
CC   
CC   This sequence was finished as follows unless otherwise noted: all regions
CC   were either double-stranded or sequenced with an alternate chemistry or
CC   covered by high quality data (i.e., phred quality >= 30); an attempt was
CC   made to resolve all sequencing problems, such as compressions and repeats;
CC   all regions were covered by at least one subclone; and the assembly was
CC   confirmed by restriction digest, except on the rare occasion of the clone
CC   being a YAC.
CC   
CC   numbers given in the feature table with their source databases:
CC   Em:, EMBL; Sw:, SWISSPROT; Tr:, TREMBL; Wp:, WORMPEP;
CC   http://www.sanger.ac.uk/Projects/C_elegans/wormpep
CC   
CC   LE_HBa-119A16 is from a Lycopersicon esculentum library
CC   VECTOR: pBeloBAC11-HindIII
CC   
CC   TOMGEN
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..11681
FT                   /organism="Solanum lycopersicum"
FT                   /chromosome="4"
FT                   /cultivar="Heinz 1706"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="LE_HBa"
FT                   /clone="LE_HBa-119A16"
FT                   /db_xref="taxon:4081"
FT   misc_feature    7682
FT                   /note="clone t7 end: LE_HBa-31H5"
XX
SQ   Sequence 11681 BP; 3419 A; 1970 C; 2495 G; 3797 T; 0 other;
     tagaggtcgt gggaggacat cctctagggg aagaggacaa gcgcccgtcc catctagtac        60
     tagggcggtg actcctccac cgactaaaga agtagtaaga gagggtgagg aaggggaaac       120
     tgagcaagtg cagaatgagg aactaccacc ccaacctacc ccagagatga taaatcaggt       180
     ccttacttat cttagtgggt tatctgatca aggtcaaaca cctccagtgt tttctgcacc       240
     agcacctcag gctctggagg tacaacatgc ggctactatg gctccccgca tggatgcctc       300
     attggaaata ggtacgtttc ctcgtctgac tacagggccg ataatgacaa atgatcagca       360
     tgaacttttc agtaagttct tgaaattgaa acctccagtc ttcaagggtg ctgaatctga       420
     ggatgcctac gattttttgg ttaactatca tgagctacta cacaagatgg gtatagtaga       480
     acggtttggt gttgagtttg tgacttatca gtttcaaggg aacgccaaaa tgtggtggcg       540
     gtcacatgtt gagtgtcaac caacagaggc accacctatg acttgggcat cattctctag       600
     cttgtttatg gagaagtata tcccccggac tttgagggat atgaaaagag atgaattttt       660
     gagcctagag caaggtagga tgtcggttac tgcatatgag gctaagtttc gtgcattatc       720
     ccggtatgcc acccaactat gtttcagtct acaagagcgg attcactgtt ttgtgaaggg       780
     gttgtgatca gagttgcgga tttcagcctt acaggtagca actacagcga aatcttttca       840
     aaaagtggta gacttcgtga tagaggtaga ggaagtgaag ccagattact tcaccatggc       900
     aactacatca aaaaggtttc gaaagggagg tgagtttaat ggttcttact ctagaggaca       960
     gggttcagga ggttactcag tctgaccaat tcagtcttca ctacagactg tagttggggg      1020
     tccacctcag accggtcaac acttctctga gagaactatg cttgaatcca gaaagtgtta      1080
     tggatgtggg gagactggac acattaagag gtattgtcca aaacagagtt acagacctcc      1140
     aaatgttaga ggtagaggtg gttatggaag aggccgtcat tctggaggac gcggtggtcg      1200
     aggtaatggt ggtcaccaaa acggccgggg tgatgggcaa actggagcca ctacatcaca      1260
     acatggtagg ggcaacggac agacaggtga gagggcccat tgttacgctt tccctgggcg      1320
     gtcggaagcg gagacatcag atgctgttat cacaggtaat cttttggttt gtgattgtat      1380
     ggcttctgta ttatttgacc ctggatccac attttcttat atatcttcct catttgctaa      1440
     tggtcataat ttacattgtg aattgcttga catgcctatt cgtgtttcta ctccggtggg      1500
     tgagtctgtg atagttgaaa aagtatatag gtctggtctg gtgacttttg tggggagcaa      1560
     tacttatgta gacttggtta tcttagaaat ggtggatttt gatgtaattc tgggtatgac      1620
     ttggctttct ccgaattttg cgatcttgga ttgcaatgct aaaaccgtga cgttagccaa      1680
     gcctggtaca gatccattag tgtgggaggg tgactacact tccaatccgg ttcgtattat      1740
     ctcctttctt cgtgctaaga aaatggttag taagggttgt ttagcgttct tggcacacct      1800
     ccgagatgat actacccaag tacctccaat tgagtcggtt tcggtagtcc gtgagtttct      1860
     ggatgtgttc cctgcagatc ttcctggtat gccaccagat agggatattg acttctgcat      1920
     tgatcttgaa ccgggtactc gccccatttc tataccccct tataaaatgg ctcccgcgga      1980
     gttaagagag ttaaaagctt aacttcaaga gttgttaagc aaaggcttca ttagaccaag      2040
     tgcatcccct tgggaagctc cagtgttatt tgtgaagaag aaggatggga gttttcggat      2100
     gtgcataaac taccggcagt tgaacaaggt aactattaag aacaagtatc ccattcctcg      2160
     cattgatgac ttgttcgatc agttacaagg tgcttgtgtc ttctctaaga ttgacttgag      2220
     gttcggttat catcaattga agatactggc aatggatgtg ccaaaaactg cttttcggac      2280
     caggtatggg cattacgaat ttgtagtgat gtcttttggt cttacgaatg cccctgctgc      2340
     tttcatgagc ttgatgaacg ggatttttaa gccatatctg gatctctttg tgatcgtatt      2400
     tattgatgat atattggtat actcaaagag caagaaggaa cacgagaagc acttgagaat      2460
     tgtattggaa atgttgaggg agaaaaagct ttatgccaaa ttctccaagt gtgagttttg      2520
     gctagatgca gtgtccttct tggggaatgt ggtttctaag gatgaggtga tggtctatcc      2580
     ttctaagatt gagacagtaa agaattgggt aagacctact aatgtgtcag aaataaggag      2640
     ctttgttggt ttagctagct attaccgtcg atttgtcaag ggattctctt ccattgcttc      2700
     ccaattgacg aacttgacta aacagaatgt tccatttgta tggtcggacg aatgtgagga      2760
     aagctttcag aaactcaaga ccttgttgac tactgcacta atccttaccc tgccagtgga      2820
     aggtaagcat ttcatcgtct attgtgatgc atcctattcg ggtttgggtg cagtgctaat      2880
     gcaagagaag aacgtaattg cttatgcttc aaggcaatta aatgtgcacg aaggtaatta      2940
     tccgacccat gatttggaat tagctgcggt agtgtttgcc ttaaagcaat ggaggtacta      3000
     tctatatggg gttaagtgtg aagtatacac ggatcatcgt agcctacagt atgtgtttac      3060
     tcaaaaagat ttgaatttga gacagaggag atggatggaa ctactgaagg actacgatat      3120
     cactatcttg tatcatccgg gaaaggctaa tgttgtggca gacaccttaa gtagaaaggc      3180
     aagaagcatg ggaagcctgg ctcacttgca agtttctaga cgtccattgg ctagagaggt      3240
     tcagactctg gctaacgact tgatgaggtt agaagtaaat gagaagggag gattgttggc      3300
     ttgtgtggag gcaagatctt cttttcttga caagattaag ggaaaatagt ttgatgatga      3360
     gaaactaagc agaatccaag ataaagtatt gcgaggagag gctaaggaag cgcaaatcga      3420
     tgaggaaggt gttttgagaa tcaagggaag ggtatgtgta ccccgcgttg atgatttgat      3480
     aaacactatt ctggcagaag ctcatagttc aaggtactct atacatcctg gtgcaaccaa      3540
     gatgtaccgt gacctaaagc aacacttttg gtggagtaga atgaagcgcg acattgttga      3600
     ttttgttgcc aaatgtccaa attgtaagca agtaaagtat gaacaccaga ggcctagagg      3660
     aacacttcag agaatgccca ttcctaaatg gatgtgggag agaattgcaa tggacttcgt      3720
     ggttggtctt caaaagacaa tgagtaagta tgactccatt tgggtgattg tcgataggtt      3780
     aacgaagtct gctcacttca ttccggtcaa ggtgacttat aatgcagaga agttagccaa      3840
     aatttacatc tcagaaattg ttcgattgca tggagttcca ctctccatca tatcagatag      3900
     aggtacgcag tttacttcta agttttggag aacattgcat gctgaattag atactaggtt      3960
     ggaccttagt actgcattcc atcctcagac cgatggttag tctgagcgaa cgattcaagt      4020
     gttggaggat atgcttcgtg catgtgtgat agaatttgga gttcattggg ataacttctt      4080
     acccttagcg gagttctcct acaacaatat ctatcactca agtattgata tggccccatt      4140
     tgaagcactg tatggaagga gatgtaggtc tcccatcggt tggtttgatg tatttgaggt      4200
     tagaccttgg ggtattgacc ttttgaggga ttcattggag aaggtgaaat gtattcaaga      4260
     aaagcttttg gcggcgcaaa gtaggcaaaa ggaatatgtc gttcgaaagg ttagagactt      4320
     ggagtttatg gagtgtgaac aagtcttgtt gaaggtttcg cccatgaaag gggtgatgtt      4380
     gtttggtaag ccaggtaaac ttagtccgag gtatattggt ccatttgaag ttttgaagcg      4440
     cataggagag gtggcttatg agttagcctt gcctccggga ctgtacggag tgcatccggt      4500
     atttcatgtg tctatgtgaa aaagatacca tggggatgga aactacatca ttcgttggga      4560
     tttagtgctg cttgatgaaa atttgtctta tgaggaggag tctgttgcta ttttagatag      4620
     agaagttcgc aagctgaggt caagggagat tgcatccatc aaagttcaat ggaagaatcg      4680
     acccgttgaa gaagccactt gggagaaaga ggttgatatg caagaaagat acccccacct      4740
     gtttacagat tcaggtactt cttttcgccc ttgttttctt cttatgatcg ttcgaggacg      4800
     aacaatgggt aaattggtat ctattgtaac gacctgttta gtcgttttga gcaacagatg      4860
     ttatttctgg aaaactggct gagacgacgg atcccacgac ggaccgtcat gggcacaacg      4920
     gaccgtcaag ggggtctcgt ttcaaaacac ttagaaattc tgaaatttgg gtactgaaat      4980
     caactctctg aacttcgtga caaaagtgca ggatggaccg tcacaggcat gacgggccgt      5040
     cacagggtct taaataaaaa gtgagtctct gaactctgtg acggagcagc aggacagacc      5100
     gtcgcaggca cgacggcccg tcacaggctg cgtaatccca agcgaggtcg gatttcttta      5160
     aatattttaa gggacgtttt ggactattcc tgctataatt ataaagttag tggtttaata      5220
     ttaataactc aattacttgg gggttaaaag aggtaacctt gagttaatta gtgggttaag      5280
     tcctcatctt ttatacttaa ttatatgcta attagggtaa aagaaagatg gtttgaataa      5340
     gaaaaataga aagaacaaga tagggaaaaa tgattgctag agagagacga acgaagagga      5400
     aaaacaaaag cttgggaaat ttgcttgctg gatcaaaatt cttcggtgga ggtaggttat      5460
     ggtttttata ctattcgtag taaactctta atagagaatg atatgtattg ggtagtgttg      5520
     taaacccttc tatatgctta attatgtgtt tgcatgttgt gattatatga ttgagataaa      5580
     ataagcatga tgaagctatg aatcctaaat cttgaaaaag aaatcctaat ctactttgtt      5640
     aatgatgatg ccttggtata aaagaaggct tgatgaatta aagtagtgag attaggggat      5700
     cgggtgccac gttccggtac caggatagta tatgaggatc ggagtgtcac attccgacac      5760
     caggatagta tatggatcgg gtgccacgtt ccggtaccag gatagtatat gaggatcgga      5820
     gtgtcacgtt ccgacaccag gatagtatat ggatcgggtg ccacgttccg gtaccaggat      5880
     agaatatgga tcgggtgtca cgttttgaca ccaggataga atgaggatcg gagtgtcacg      5940
     ttctgacact aggatagtac atgaggagcg gagtgtcacg taccgacacg agaggaataa      6000
     agataatgaa tcttgaaaga tgttaatata ttcaatctaa tgaacctaat tcccaaatga      6060
     gtatgatgag gaggcgtgag tcctcattga tgtgcttggt gttgtaacca agggttatgg      6120
     taattgtaaa tgctgcatgt tgagtattat agttgatttt atgatgttat ctaatatata      6180
     ctgttttcta ttttgagttg gccgatgata cctactcagt acctgtgttt tgtagtgacc      6240
     cctacttgta tgttttcttt ttgttcattg tggagtgcag caaacgtgcc gtcgtcttca      6300
     actcaaccgc aactctagcc agtcttcatt actccggatt tcagggtgag ctaatgcttc      6360
     tagcttggac tggatcttcc tcttcatgtc ttgatgcctt gaagttccgg catagactag      6420
     ctttttatgt attttagctt cttagatact cttagattag taatttgagg atagatgttc      6480
     ttgtgatgat gacttccaga ttttggggat aataatagtt gttgagcttt tagaagctat      6540
     tgaattggtt tttattaatg agtttaagtc ttccgcatta ctttctgttg atattatatt      6600
     gaaatgttaa ggtttagatt ggttggttcg ctcacatagg agggtaagtg tgagtgccag      6660
     tcacgacccg atttgggtcg tgacacctaa tctgttagat cgatctcagt gcttataatg      6720
     agacctttct tcagtactgt taattttagt aatagcagtt ggattctcag tgcaaagtgc      6780
     aacatcaaga tctaaaactc cgagatggaa tttgatctgt tcgtaccaat ctgagaagtt      6840
     aagaccttta aaggttgtaa cagaggcaga gtacaaatgt agagcaaatg atatgaatat      6900
     aatatgctca tttgttaata ctttgagttg tgaattttaa acttattatc aaattcagaa      6960
     atggtttaca aattcttaaa tgtatgtttg atgtcctcct ttgggtgaaa catcaaaata      7020
     cagctttaga cataatgatg cttagatgtg aatttaactt aattcaataa ttttaatgtg      7080
     tcaatcaata aaatatatca tctttgacta aataaataaa actaacgaca catccaaatt      7140
     atctctttaa tgttcaatgg ttataagatg aaataatcaa tctttgggta atccataaat      7200
     atgttagaac caaaaacttc aatatatccg taagtgttgt ataagttata agcataaaaa      7260
     aatggataat taaatatatg tttagtcatt attattttga attaattctt caaagattag      7320
     accattttgc tgattaactg atttcatata cgtaatttca aaataaaata catcatgata      7380
     gtgaataatt atttcactta atactaccta ttaccatttt caaataagga aaacattaat      7440
     tttatgaaaa gtcactagtt cttaaatcag gctctgatac cacatgttag gattttaatg      7500
     attgtgaaaa cataaacaat ctatgcattc atgaatccta taaattattc atgatcttag      7560
     aactatatga tttttacaca aatttattac tataataatt cagtcaagaa tacatacccg      7620
     agtcaaccta gttatttttt aagaatctta actttaattg agcggaagcc tttttgtttt      7680
     cattcttcaa aagttgttta tctctcttgc gttatacttt atgaatagtt ttgatggata      7740
     agaccataac tttatggaag acagaggacc ctttaagata agattgtgtt taacatcatt      7800
     cacacctttc catcatggtg agcagtggag ataatggata gttttaaaac taccaagtaa      7860
     ctccctactt aatgggtaat tagaagagat aatgggtaaa gtgaaagact taatgggtgg      7920
     ttggaagtta caaacttact tccccagttc tccacacatg tcagtaactt ctccaattat      7980
     ctaattagaa tttgaattta attagtaatt aaatattaaa ctaaacaata ttaacgtgga      8040
     ccataaaaat taacacacgt gggccataaa actaacaatc gatgcttgaa tgttatagat      8100
     gaagagtact cctttttttt tgaaagtttt tgtgtactaa catagattaa gaaaaacttt      8160
     attttgtcaa ttttaatgat ccctttctgc gggcttactt ttatgtaagt tgctttgttg      8220
     ttccccttcc ttgtttgtct atatgtctgg atttgtattt ttattcggtc taattttcca      8280
     tgttcttatt ctatatggtt ggaatctgtg ttttttccat atttataatg tgtttgtctg      8340
     ttattggtaa ttatgcaaat tcattgaatt cttgtatatc tgttttttta atagctaggt      8400
     tagctaaata atcttctatt gaattgtctt ctgaaaatat gtttgatttt atccttctgt      8460
     gtctgcattt atttcattat gtcctcaatt atttttgcaa tttttcatga tatcctctat      8520
     gtcatttgta tgatgttctt ttcaaataag agattttgaa atctcttcga tttccaaagc      8580
     ttcttgaatt gttgtgggct ctgcttctat gtttgtgtca agtcctattt ctttagcttg      8640
     agcagaccta atatcttcat catgtcgctg aaacagaact cctgcttttt tgcatttcac      8700
     ttgatcaata tttggtgcct tcctctcaac attgtgatag tatattttag acttgtagaa      8760
     tcctaatata ttaaccacct cagaccatgt ctttccaatt aggttaaaac ttaagttctt      8820
     atcgttttca gccactagat gtttttttgt tacttgttgt atcagtcctt cgaagttaag      8880
     ttgtcctcca tgcataatat gatttcgcct cttccataag ctccacatta tcaatgttgg      8940
     tatagctcta aggaaaatcc taaacttgtt aggggcttca acatatacca ccaataattt      9000
     atggtctgca ataggtttct accttctata tctacacttg cacatgaagg aaaatacctc      9060
     catagatttt gggctataga agctgctaga tataggtgaa acattgtttc atttgttgtg      9120
     tttcacaaca ccaacattta gaggttgata attttcattc tcttcaaatt accatcagtg      9180
     gctaatgcaa acattcgttt ctccatttac ataattgttt gtcgtgatcg aatacacgac      9240
     tcatttgata tattttaaaa aaataatttc ttcatagtca tgctaaatca caagaacttc      9300
     aagaaaaaaa ttatttattt gtatcaaatt acaaaactac ggcttataga ttttcttatt      9360
     tgttaatcat gcgacattgc ataatctgca tactattttt ttagttgtgg tacttcacac      9420
     aacaagcttt aatcgaaatg tcgcaacaaa gtaattaaag tgtaaagtta agaatgttta      9480
     ttgagattaa atttgtaatt atgcttaatt aatcaggttg ttagaatagt tagttagctg      9540
     tcaaaaatca gttagttagt tagttttcat tttcagaaag ttagttagat attttctgct      9600
     ttagttgtta tataaatact gcacattcat gtttctgttc tcaatgaaaa tagcacacat      9660
     tttcaatgct cttctctgat caagctttca tattctcatc aatggaggtt ttcaatcatc      9720
     ttcaacatta acatggtatc agagtgagga cgtttctgat ctttcctgct tctttctttt      9780
     tcaattttcg catcagatct tcatatttca ttctctgtaa accttcgaat tttctttgtg      9840
     ataaaaatgg tagatcctac ttctacgagc actggttcag ccagtattcc ttcatctggg      9900
     actgatacag ggagtcattt ctacagtcat cctcagataa tcttggagca gtacttgtac      9960
     cagttccttt taatagtact ggttttcatt catggcgtcg tagtgtactt cattctttgt     10020
     cagtgaagaa caaactagtg ttcatcaatg gtgagtgtaa gagaccagag gtgaatcatt     10080
     ccacttatca tcaatgggtg aggtgtgatg atatggttac ttcctggatt ctcaactctc     10140
     tgtatcgaga tattgttgat agtgttgaat atgtcaatga tgctctggaa ttgtggacag     10200
     aactggagga tcgatatgat cagacaaatg gagcaaaatt ttaccaaact cagaaggaaa     10260
     taaatgatct taatcaaggt attctcgata tcacaatata ttacactcct atgaagaaac     10320
     tttgggagga attcaacagt atatgtgttt taagttagtg taattgtgtg tgtgtgtgga     10380
     gctaaaacta atgttcagaa ggcggagaaa gataggcgtt tgattcagtt tttgatgggc     10440
     ttaaatgtgg tatatactat tattagggga agtattttga tgatgaatcc cttaccatct     10500
     ttggcacaag cttttgcttt actagtacaa gaggaaaagc aacgagaatt caaacccaat     10560
     aatcaactgt ttactgaaag tagttctcta tctgcagttt catcaagttc aggaggtaga     10620
     aattttcaaa caaattattc tacctccaac acaaaaccaa gaggaaggcc tttttgtgat     10680
     ttttgtagaa ggccaggaca ttttagagca aagtgttata agttgcatgg ttatccatct     10740
     aatgacacaa atagttataa tacaaatcag catcaaaatg gttatattcg tgatcagcat     10800
     aatccaagga acacagttca aaatacttat ccaaatccaa ggcataacaa taagggaaag     10860
     ggtgcatcag caaattctgt aagaatatcc tgtgatggag gtgttagtgg gcagacaaag     10920
     gaatcaggtt caaccttttg taatgatcct caaggaaatg agaatatcag tatcaccaag     10980
     gagcaatatg atcaagtttc tcacttgcta aatcagttcc aagattgtaa cactatggtc     11040
     aatcaaaatg atggagtatg tggagctgtg aactttgcag gtgcctttgc ttgttccttc     11100
     tctcttgatt atattaaact ttcatgtgaa tgtttcaaaa caaggactga tctatggatt     11160
     ctagactcag gagctgctca tcacatgact tttaacaaaa ataaccttgt gaatatagta     11220
     aatctacctt gtcctatgtt agtcagatta ccaaatggat atagagtcaa aatcacaatg     11280
     gttggtaatg tacatcttac acctaaaatc attctgtccg agtattgtat gccccttctt     11340
     ccaaatacaa tttaatctcc atcaactctc ttgtaaacca ccttaaatgc actgtctctt     11400
     tttctaacac ttcttgtctg ctgcagcccc ttcactgaag aggcctctgg agattggtaa     11460
     gatgcatgat ggtctttact tcctttgctc aaattgctta caaaagaact cacatgatca     11520
     acaacaatac cattcttctt ctttttttat tttatccagt aataaagtac aatgtacatc     11580
     ccttacatgt aactctcatt caaatgcaat aaacttttct tttgttggta ataaagataa     11640
     tgttgctgaa cagttctttc agttctaatt cctttcctaa t                         11681
//


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