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EBI Dbfetch

ID   CR956390; SV 11; linear; genomic DNA; STD; MAM; 7495 BP.
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AC   CR956390;
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DT   01-JUN-2005 (Rel. 84, Created)
DT   17-MAY-2007 (Rel. 91, Last updated, Version 16)
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DE   Pig DNA sequence from clone PigE-201K20 on chromosome 17
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KW   HTG.
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OS   Sus scrofa (pig)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus.
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RN   [1]
RP   1-7495
RA   McGuire S.;
RT   ;
RL   Submitted (17-MAY-2007) to the INSDC.
RL   Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK.
RL   E-mail enquiries: vega@sanger.ac.uk Clone requests:
RL   clonerequest@sanger.ac.uk
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DR   MD5; 9c9ef4ebb79727f65136e006a2d27b21.
DR   ENA-CON; GL043840.
DR   ENA-CON; JH118026.
DR   ENA-CON; GL882245.
DR   Ensembl-Scaffolds; CR956390.11:1-7495; sus_scrofa.
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CC   -------------- Genome Center
CC   Center: Wellcome Trust Sanger Institute
CC   Center code: SC
CC   Web site: http://www.sanger.ac.uk
CC   Contact: vega@sanger.ac.uk
CC   --------------
CC   
CC   This sequence was finished as follows unless otherwise noted: all regions
CC   were either double-stranded or sequenced with an alternate chemistry or
CC   covered by high quality data (i.e., phred quality >= 30); an attempt was
CC   made to resolve all sequencing problems, such as compressions and repeats;
CC   all regions were covered by at least one subclone; and the assembly was
CC   confirmed by restriction digest, except on the rare occasion of the clone
CC   being a YAC.
CC   
CC   The following abbreviations are used to associate primary accession
CC   numbers given in the feature table with their source databases:
CC   Em:, EMBL; Sw:, SWISSPROT; Tr:, TREMBL; Wp:, WORMPEP;
CC   Information on the WORMPEP database can be found at
CC   http://www.sanger.ac.uk/Projects/C_elegans/wormpep
CC   
CC   PigE-201K20 is from a Male large white x meishan F1 PigE BAC library
CC   VECTOR: pBeloBAC11
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FH   Key             Location/Qualifiers
FH
FT   source          1..7495
FT                   /organism="Sus scrofa"
FT                   /chromosome="17"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="PigEBAC"
FT                   /clone="PigE-201K20"
FT                   /db_xref="taxon:9823"
FT   misc_feature    2000
FT                   /note="Clone_right_end: CH242-69F10"
FT   misc_feature    5496
FT                   /note="Clone_left_end: CH242-163M14"
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SQ   Sequence 7495 BP; 2055 A; 1678 C; 1583 G; 2179 T; 0 other;
     cctgtccatg gctcagtgtt aacgaacccg actagtatcc atgaggatgc aggtttgatc        60
     cctggcctgg ctcagtgggt taaggatcta gagttgcctc gagctgtgct gtagatcgaa       120
     gatgtggctc agatcccgag ttgctctggc tgtggtgtag gctgacagct gcagttccga       180
     ttggacccgt aacctgggaa cttccatatg ctgtgggtgc ggccctaaaa agaccaaaaa       240
     aaaaaaaaaa aaaatcacta tcagacattc agagctccta gaaatgtact gactcattat       300
     tcatcgaagg gtgtttgttg aacaacgcct cctagatgga tggcatccta ttccttcctg       360
     agagaggaac atcctcctta gcatggattc gagcccctcc accacacagg tcagacttgc       420
     acctcataag gtccttgtgg ggggaggggg ggagccatag caccacactg cagctccaat       480
     tgttacaagc agaagtattc ctactggttg atatttcccc agcccttatc tccctataat       540
     cttgcaacta aagacttggt gcctgcagtc aaagaagcct ccagattctg ctctggtggg       600
     accaatatca cttctgattg gcaggtgctc ttgctgtgct gtttgtaaca ttgttgcatg       660
     tcaccaatct aagccacaac aaaaaggatg aactggtgcc ttctgagggg ctggccatca       720
     tttcccccac cccaaggctc aaagagcttt tcaccagaac ccttgtggcg ttttgtaact       780
     ctctcctccc ttctgtgaca gtcggcctgg atagcagcta caatgtcttc tcatttgatg       840
     ctgccttttg aggatagggg ctggatctaa tttggttcac ccttttcccc tgtaagggta       900
     agtactctgc cttccttgtc caaaacagct ctttagtaac taagacgtgg gctgtgcgat       960
     ttcaggctgg aaagcattta agggaagaaa aaaaagaaaa aagctctgtt gattatagag      1020
     ttgttaaata gtcaataaca cagagttggc ttctctaaca accccaatat attctctctg      1080
     catccttttc ttctctaggg atctttcttc ctgaaagaac tcagatttaa agaaacttct      1140
     tccctccttc ctcttttctt ctccaaaagt acttattttg cagcccccaa atccagcaga      1200
     gcaaccatat tagggactca atcattgatt gcaaaatgac tgaatgctcc acatagagtg      1260
     ttattatcag tcattcacct tatagtatac actggctgaa atgaatctct cccaataatt      1320
     tttttttctt tttaggacca cactttcagc atatggaagt tcccaggcta ggggttgaat      1380
     aggacctgca tctgccagcc tacaccacag ccacagcaac gcaagatctg agctgcatct      1440
     gcaaactaca ccacagctca cagcaatccc agatccttaa cccacggagg gaggccaggg      1500
     atggaaccca caacctcatg ggctcatatc cactgagcca caatgggaac tcctctccca      1560
     taaaatataa atgcaaaccc tcttaggtaa ttaaagatga aagtcttgat tctttactaa      1620
     aagatgttcc cttagccagg gtgttctgaa gatgtgaaac acattttctt tgactcctac      1680
     taagagaatc tatctgacgt tataaatcac agggtcctgt ctccctttcc caccacatgt      1740
     gactgaacaa agatagcccc tgggttctag ggctaccaat ccatttgata ccagaaatcc      1800
     atgacttgtg tgtcctgtct cagccagata agatcgggct gctagatttt ctttctctag      1860
     gatctgaaag aaacacagag atggtttcca gtaagcactg ggtcctagaa gagaggtctc      1920
     tagtctccca aaccggctat tgaagggcca cgtgcaagta gaagcagagg ataatgctgg      1980
     aagaaataaa aggactgatc acacttggag acagaggccg attctctgcc ttctgaaaga      2040
     tggagggagc gagagagtga acagtgaatc tccagttcct tgaccgctac tcataagagg      2100
     tccagcaaca ctgtcttttg acctggagtt tcttgagagc ttcctgcctc ctcgtaataa      2160
     agctcatttc actcgagcta gttttagtaa cctactactg ttccttgcca tccaaaatcc      2220
     tcattagaac aatgtcccag aaatcatgcc acataagccc atgcatctcc tgccaagaga      2280
     catgaacaaa tccaatcccc tgcctatggg aaatgttttc ctaacaatgt gggaacggaa      2340
     acatcacctg ctccccaccc ctactccagc cccagcatcc gggggtgggg gggctgcggg      2400
     ggagagaaaa aggatcaagt ccaagtttca ttccaggcac agcacagatc tgctcctcct      2460
     tctttcttcc cttccttccc tccctccttc cttcttttgc tgttagagat gtacaattaa      2520
     aaaaaacctg tttgtgattt tgtggcccag atgtttcact tttctgagat tcctagattg      2580
     tacctgatgc taggaatttt gctactagac ctctagggat ttcacttctc tgcactaaga      2640
     ctccccttaa atgagtaaaa taaaataaaa tctgaactgg tcttacatag gaaaccaata      2700
     ctctggcggt cagtaaaccc caccactgct tgtctgacca ttccttagag aaaccaagtt      2760
     tcaagcaagc cctagacagc aaggacccaa gaacaatttt cttttctgaa agaaactgtc      2820
     tcaaagaagg caaagacaga cacacaaggc attcagctct aaaggccttg cctgaaaaag      2880
     agccccgagg ttgaatgaaa gaagactcca tgcatcaggg ggcagacaga gcctctgggc      2940
     agtgatgcag aaggtggaaa gtggggccag gggtgggcag tgagacccac gtcacagcca      3000
     gaccaaagcc caccgggtca cttgatcacc cttttctctc cttggggata gttagcaacc      3060
     caagcaaatg ttattcgtca ggggaaaata agtagcttta ggagaaaaag gctctgtgaa      3120
     caaccagccc gtgagttcta aacgtttcag agcagtgcgg agtaaattct ccggactccc      3180
     ttgggaaaca gccaaattat cgacttgtgt gcgacggctg tctttgcggg tggaactaga      3240
     aggatggttt aaacatcctt tctcatggat tttataattt aaaaacagtt agggatggtt      3300
     catccacaag gtcctccaac tgccacatta gccaacaact tgcatgtcta agacgaccat      3360
     gagcagtgag acgctggggt cccggggcag acagattttg acgcccccac aacaccctgt      3420
     gcttgtccca gtcattacgc ttatcctact ttctggaact cgttgattta tttattgtgt      3480
     tcgccataga ttatcaactt cctgggagca cagaatttag cagagacgca gtaagcaatc      3540
     aatcaataaa ataatttatc attgctttta tttctcacag gggaaataat aataccattt      3600
     actcactata aatatgatag gaaaagtaaa attctttcca aaaaatttgg agccttggag      3660
     tgttttgatt tttttgttgg aatagcgata acttaatgtt ttgttagttt cacgtggaga      3720
     gcaaagtgat tcagtttaca tatatgtatt ctttttcaga tcattttcca ttttaagtta      3780
     ttacaatata ttgaatatag gttccctgtg ctatacagtg ggtcctgttg tttatctatt      3840
     ttgtatataa tagtgtgtat cttgaatccc aaagttctaa tttatccctc ccccctttgc      3900
     tcccctttgg taaccatatg tttgttttcc atgtctgtga gtttgtttct gttttgaaaa      3960
     taagttcatt tgtatcattt tttttaggtt ccatgtataa gtgatatcat atgatatttg      4020
     tctttctctg acttacttca ctcagaatga taatctctaa gcccatccat gttgctgcaa      4080
     atggcattgt ttcactcttt ttatggctgg gtaatattcc attgtacaga tatacctcat      4140
     ctttgtccag ccatctgtca gtgaacattt aggttgcttc agtgtcttgg ctattgtaaa      4200
     tagggccgta atgaacattg gggtgcatgc ctctcttgga attagagttt tcatcctttc      4260
     ctgatatatg cccaggagag ggtttgcaga atcatatggt aactctattt ttagtgtttt      4320
     aagaaatctc catactgttc tcccagtttg ctttcctatc cataatgaag gggggggggt      4380
     gtcccttttt tccatactct ttccaacatt tattatttgt agactttttg aagatagtca      4440
     ttctgactgg tgtgaaatga cacctcattg taggtttgat ttgcgtttct ctaataatta      4500
     gcaaaattga gcaacttttc atgtgcctgt tgaccatctg taggccttcc ttggagaaat      4560
     gtctatttag gtcttctgcc cacttttgat cccaatcaaa aatgggattt ttttttcatt      4620
     tgattttttt tttttttttt ttgatagagg gcttgaaatg cttagtctat gcttaggtac      4680
     taagaatgga agtccagtga ggcaaagggg gtttattgga aggatcctat cgtgtaaagt      4740
     ccaagggcaa aactgaacct tggcaatgta atgaagcttt gtggataatc caaaatattg      4800
     cctttcctct gcctacctat ctatctatca tttatctctc atctatctat atatctctcc      4860
     ctttggcaca ctgcaatatt cttttgctca ctgcaatcta gctttctctg aagcctccat      4920
     gatatgcaat ggcaactgac actcccaaat gttgcatata acagatccat ccacccaaaa      4980
     tctcagggaa aggactcagt gcctcatccg ggatcacatg tacaccccct gcagtgcaca      5040
     cgcaatgatt cctacaatca ggtacgtgga aaattagagc aggatcaatt cctaaaaaat      5100
     gaaggtcaaa gtacagatta atttgtaatg tgtgattcca tgttagcaga cggtatgtgt      5160
     acatagatgt gggtatgttt gaataagcaa agaaaaagat gaaaagccag acaccaaatt      5220
     gtcaacatta gagaaacgga ataaaaggaa aggaaactct attaatttta cttcagctgt      5280
     ttgttatttg aatggtcaca acaatcatat attacataat gattcacctt tactacagtt      5340
     ttttagagga aacgggtgcc aagaagacca tccaatagga gtctggactt tttttcataa      5400
     tttaaactta attaaagttt ggagagaaaa ggaagcaaca ttctttctca taagcagcat      5460
     tggttgaaca gcaatttctt ttcttttgtt atattgatcc aactctaaaa aatcattcaa      5520
     agtccaggaa gatgcccaga catataaaac ctcccagcct acattaaaaa aaaaaaaaaa      5580
     attacactgc aactggtaaa gctcatgagt catatctgat tacatttcag attcaacttg      5640
     gatctgtagt tatataatat gttagcacct gggaagccct ggctcaatgg caggtccatg      5700
     atatgggccc agacacgtta gtttctgttg cctacatgaa ggggatctga atgtccagtc      5760
     caaaccaaga gcttctactt gtaagaatct tctgggaggc ttctcatcag ggcagtctct      5820
     ctggccctac tctgagacga tagttctgct ctgaactggg aatttgttta ttaaacagca      5880
     cctgggcgac tctgaagcag aggctgcatt gactttgtag atggtggagc agcacatcca      5940
     ccaaaggttc acgtgcagtc aggtggattc gccctttggt tgaaaacaga gcctttagaa      6000
     ccagcttcat ctgctgctgg ccttacaacc atgggagaaa gtacagactt ccgcccggaa      6060
     aatcacagtc ataaaaataa tgccccatct gtagtccatg gtggggcttg aacaaggaaa      6120
     catagcaggg tgcttagcac agtgtcaggc acacaggcag tgctcaatta aaggtattga      6180
     ctattatcat taacttatgg catctattca tgactagagg tgagggtgtg tggtggggcc      6240
     ctggaccaag acgcacagct ggccacagct taacctcacg gacctgatag aggagagggc      6300
     agcgtgccca agtgtgagac agactcaagg gctagagaac ccagcgcaga gacaataacg      6360
     gaagacaagt tttgggggca agccatcgcc aagggaggaa cacctgggtt ctagagtgat      6420
     gaggccgaag tgagttaatc tgcagtcatt ctccctggct gaagctccca cgtgaggcta      6480
     agacacccag catgttgtga gcttcctgca aaggatgggc aaagagtttc gttttctctt      6540
     tatttctctt tttctcctga aaatttttgt tgatgttgtt acttatggaa aacttttttt      6600
     cgttttttaa agttttgttg cagtgtagtt gatttacaat actgtgcaga tttctgctgt      6660
     acaacaaagt gattcggttc cacgtgtagt tttctttctt tcttttcttt tatttccctt      6720
     tctttctttc ccattctctt aatcattggg tcttattcag actatctgca agacacattt      6780
     agcagcaata gattttccca cttgaaaatc gtacagaacg tcaagaacgg gtggccagca      6840
     acagtcatca cagcaacaga ggaaccagaa agccacgtac ggatggcaga aaaatacctg      6900
     agccagacag aggtatctta aggagctggt agtccaacta gttatttggc attattatta      6960
     tttaatgtct ggagggtcct agacatttta aattttcctg actttaactg tgtgtattgg      7020
     agttcctgct gtggctccat gggttaagaa cctgacatat tatccatgag gattcaggtt      7080
     caatccctgg cctttctcag caggttaagg atctcgtgtt gctgcaagct gcggtatcag      7140
     tgggcttgga tccagctttg ctgtggctgt ggcggaggtc gcagctgcag ctccaattca      7200
     acccctagcc tgtggaactt ccacatgccg caggtgtggc cataaaaaga aaacatacaa      7260
     acaaaaacag tgtgcatctt gaggggagag agagaaatag cttcagtcca caagggaacc      7320
     ctcctctcca ctgccctctg tgccccctgc ccgggtgagt gtgcaacggg aggtgggaat      7380
     ctgcagagac ccctgatagg ctcagtgctt gctgcctctc tcgtatgagc atcctgtgca      7440
     atggcgtgtg acgctagtgt ttaaacagca gtattttcct accacatggc cacta           7495
//


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