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EBI Dbfetch

ID   CR956371; SV 3; linear; genomic DNA; STD; MAM; 3996 BP.
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AC   CR956371;
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DT   01-JUN-2005 (Rel. 84, Created)
DT   17-MAY-2007 (Rel. 91, Last updated, Version 4)
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DE   Pig DNA sequence from clone CH242-167H11 on chromosome 17
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KW   HTG.
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OS   Sus scrofa (pig)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus.
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RN   [1]
RP   1-3996
RA   Wright D.;
RT   ;
RL   Submitted (17-MAY-2007) to the INSDC.
RL   Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK.
RL   E-mail enquiries: vega@sanger.ac.uk Clone requests:
RL   clonerequest@sanger.ac.uk
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DR   MD5; 02781c88693ca0acf919ec028979df9b.
DR   ENA-CON; GL882244.
DR   ENA-CON; GL043839.
DR   ENA-CON; JH118022.
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CC   -------------- Genome Center
CC   Center: Wellcome Trust Sanger Institute
CC   Center code: SC
CC   Web site: http://www.sanger.ac.uk
CC   Contact: vega@sanger.ac.uk
CC   --------------
CC   
CC   This sequence was finished as follows unless otherwise noted: all regions
CC   were either double-stranded or sequenced with an alternate chemistry or
CC   covered by high quality data (i.e., phred quality >= 30); an attempt was
CC   made to resolve all sequencing problems, such as compressions and repeats;
CC   all regions were covered by at least one subclone; and the assembly was
CC   confirmed by restriction digest, except on the rare occasion of the clone
CC   being a YAC.
CC   
CC   The following abbreviations are used to associate primary accession
CC   numbers given in the feature table with their source databases:
CC   Em:, EMBL; Sw:, SWISSPROT; Tr:, TREMBL; Wp:, WORMPEP;
CC   Information on the WORMPEP database can be found at
CC   http://www.sanger.ac.uk/Projects/C_elegans/wormpep
CC   
CC   CH242-167H11 is from a CHORI-242 Porcine BAC Library
CC   VECTOR: pTARBAC1.3_BamHI
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FH   Key             Location/Qualifiers
FH
FT   source          1..3996
FT                   /organism="Sus scrofa"
FT                   /chromosome="17"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="CHORI-242"
FT                   /clone="CH242-167H11"
FT                   /db_xref="taxon:9823"
FT   misc_feature    1997
FT                   /note="Clone_left_end: CH242-271L5"
FT   misc_feature    2000
FT                   /note="Clone_right_end: CH242-112C22"
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SQ   Sequence 3996 BP; 1069 A; 960 C; 958 G; 1009 T; 0 other;
     ctgccgatcc cactgctcca cagtgggagc tcctggactg tctatgttcg tctcactgat        60
     ccgacctttg tatgcttctc tgtaaacaca tcaatgaggt ggaagacggc gtgcaccaga       120
     cgccagagca ccacacccct gcttctaaag cccccaaatc ccgaattcca aagcactttc       180
     agctctaagg gtttggatga gagaggctaa tgtgtgttct ttctcattct gaagctgagg       240
     aatagagagc tggcgtatga aataacaatg ctagtgggtg gcagagccca gatctgaatc       300
     caggaatcag acccttgtgt ctataaccac caggctctct tagcagaggg ggttgttgac       360
     tggatgaatt aaggggtatg agacgctgac tgggccttgt tcccactcct gggctggttt       420
     cctgctgctg gggagatgcc tgcctttcct ctgtcagaac atcttctcag gccaagtgct       480
     gcagttataa atgtgcgtgt aacacacaca cacacacaca cacacacaca cacacacaca       540
     cacccatacc cccccacaca ccccccccca gaaaggagca acatactatt acatttcctg       600
     gagctttgta gctgcctgtt gttttcagca atctcatccg tatgaatcag gtgacaaaac       660
     ccactagtaa ccaggcaggg gaaagaaaac agatgctttt ccagccaggc aggattgagc       720
     tgagcagttt gtcactgtgg ttaaactctg cctccatcaa ggcacagccc cttgtaaaaa       780
     attgttactg ttctctctct ctggctttgg gagttgctgt ccccaacact caaagccaca       840
     gctagcagga aaagtgtcat ttgtctgcag ggtacgaaga cgggcacagg gccctggggt       900
     agagcaatgc tgtttccgaa agcttcaagg cattatttcc tccagtcaag aggggaagcg       960
     aacctcctct cgcgtgcttc acagcttcct taagaagttg cctctaggaa gcaatggaaa      1020
     attgacatgg ttgtaagtgg gcacgagtgt ccttaaaaaa gctcaaagga gcgagatggg      1080
     ctatggcgtg gccagcggcc gacactgttg attaaagcac agtcgtaggc gggtgaacac      1140
     gagatgattt cctctttgtt taaaaaacgg gcatgtatcg ggagttcccg tcatggcgca      1200
     gcggaaacaa accccgccag gagccacgag gttgagggtt cgatccctgg cctcactcag      1260
     tggtttaagg atccggcatt gccttgaaca gtggtagagg ttgcagactc agctgggatc      1320
     ccttgttgct gtagctgtgg tgtaggctgg cagctacagc tccaattcga cccctcgcct      1380
     gggaacctcc atattctgtg ggtgcggccc ccccaaaaaa agcaaaaaaa aaaaaggcat      1440
     ctatctacat gtgtgtgggt gtgtgtgtat gtgtgtgaaa acagaaaaag ataagaatac      1500
     actctcagcc ttaacacagg aagtaagtga gaaacaggtg ggggtggagg aaagcgtgtg      1560
     tggcagagag ggagggcagt tttctatttt caatcattat acactgcggt attcttccat      1620
     ggcttgtgca atcaaaaaat aaataaacat gaaaaaaatt aacatgcaaa accaaatgaa      1680
     cacacaaacc ctaacccccc caaggcactg cttcaaaata aacagaactc ccttaacttc      1740
     taagaatctg gaggctccag gcacagaagg acgtcctggt ttggggcagc cctagttcac      1800
     tcattctgga agctgacgcg gaatgccacc gcatccccgg aacaaggcag actccttaac      1860
     atggttatta aaacgagcct gctgaacaaa agggaaatgt tcaattcctt cctcgctctc      1920
     tcatacgctg cttgaagtta ttaacactta aaaaaaaaaa gagagaaaga aataggaatc      1980
     atccaaaatg attgatgatc ctcgtaattc ctttatcctt cagagcacac atgctacgag      2040
     aggaaggcat caaatcccac ctctgaatac taaagagcaa aaacacaaaa gtaggagcca      2100
     gcacgctgaa aaaccagcct ttttcagaga ctcagggacg ccctaggtcc tgagggatcc      2160
     tttagatttc acaccaaaca tttttggcct ggttaatcta ccatcaaaca acctgcttat      2220
     cttttcatgt tcacattacc tttcagttga cgtcttacta gactgtctgt tacttttttt      2280
     tttttttttt tttttttttt ttttggtctt tttgcctttt ctaaggacgc tcctgtggca      2340
     tatggaggtt cccaggctag gggtctaatc ggagctgcag ccaccagcct atgccagagc      2400
     cacagcaacg tgggatacca gccgtgtctg cgacctacac cacagctcat ggcaacgtca      2460
     catccctaac ccactgagca agggcaggga tcgaattcgc aaccttgtgg ttcccagtcg      2520
     gatttgttaa ccactgcgcc acaatgggaa ctccatagat tgtctgttac ttcttgcgtt      2580
     taaaaaattt tttttggcag gagttcccat tgtggctcag tggttaatga atccaactag      2640
     gaaccatgag gttgtgggtt cgatccctgg ccttgctcag tgggttaagg atccagtgtt      2700
     gccgagagct gtggtgtagg ttgcagacgt ggctcggatc tctcattgct gtggctctgg      2760
     tgtaggcctg tggctgtaac tccgattcaa cccctggcct gggaacctcc atatgccacg      2820
     ggagtggccc aagaaatggc aaaaaagaca aaaaaaaaaa aaaattattt ttggctatgc      2880
     ctgtggcaca tagaagtttc caggccaggg atcagacatg cgccacagca gtaaccccac      2940
     ccatggcagt ggcaatgctg gatctataat ccgttgagcc actgaggaac tccttccctt      3000
     tacttttttt tataaatcag gttatataga aaataggagg tgggagttcc ctgggagcct      3060
     agtggttaag gattcagagt tgtcactgct gtggctcagg ttcaagccca ggccagggaa      3120
     tttctgagag ccatgggctt ggctcaggtg taagagccag aggcaggtgt ggtgatggtg      3180
     acccagagga agggcccacc tcctgctgca ccatctctgt ctgcacacac accagaaatt      3240
     cagcaacacg gtggctgccg gcaaggtata aatggagaag cttgattctg aaactggctt      3300
     ctcttagcag aacagtatgc ttaattactg gagctttaat cgtgtgtgct gaaagaataa      3360
     tcaaccagga cgggtggatc ttaaatattt gagaagcctg caaggcagtc tcgcagggct      3420
     gggacttttc ctttacagga tccacctctg gtgggcaaaa gtttgtcagt ctccccgagg      3480
     ttttcagact taaggaaacg ggttagaaaa agtctctttg catctacctt ttagaatgtg      3540
     tttttattaa atgaagatcg tgcgagaaat tttgttttca ctgatcaagt gagataaaga      3600
     aaaggccttc tgaaagcttg atccaagtgt tttgttcccg tccttttcaa agcactctca      3660
     tcacattatt tcttatttga tcctcctagc gacctagagg ctgagagagg aagcaacctc      3720
     cacattacag atgaggaaag agaggcatca aaggtgaatt catgcatgta aacaattgga      3780
     tagagagtgt ttaggattcc cagtcttttt tttttttttg tctttttcta gggctgtacc      3840
     cacggcatat ggaggttccc aggctagggg tccaattgag agttatagcc tctggccaca      3900
     ccaacgccag atccgagccg catcttcaac ctacgccaca gcccacggca acgctggatc      3960
     cttaacccac tgagcgaggc cagggatcca acccgc                                3996
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