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EBI Dbfetch

ID   CR925788; SV 4; linear; genomic DNA; STD; VRT; 2223 BP.
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AC   CR925788;
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DT   01-DEC-2004 (Rel. 82, Created)
DT   20-MAY-2006 (Rel. 87, Last updated, Version 5)
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DE   Zebrafish DNA sequence from clone DKEYP-55D6 in linkage group 10
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KW   HTG.
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OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
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RN   [1]
RP   1-2223
RA   Johnson C.;
RT   ;
RL   Submitted (20-MAY-2006) to the INSDC.
RL   Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK.
RL   E-mail enquiries: zfish-help@sanger.ac.uk Clone requests:
RL   http://www.sanger.ac.uk/Projects/D_rerio/faqs.shtml#dataeight
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DR   MD5; 849c895d93a1b74dc89659da29684f43.
DR   ENA-CON; CT992636.
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CC   -------------- Genome Center
CC   Center: Wellcome Trust Sanger Institute
CC   Center code: SC
CC   Web site: http://www.sanger.ac.uk
CC   Contact: zfish-help@sanger.ac.uk
CC   --------------
CC   
CC   This sequence was finished as follows unless otherwise noted: all regions
CC   were either double-stranded or sequenced with an alternate chemistry or
CC   covered by high quality data (i.e., phred quality >= 30); an attempt was
CC   made to resolve all sequencing problems, such as compressions and repeats;
CC   all regions were covered by at least one subclone; and the assembly was
CC   confirmed by restriction digest, except on the rare occasion of the clone
CC   being a YAC.
CC   
CC   The following abbreviations are used to associate primary accession
CC   numbers given in the feature table with their source databases:
CC   Em:, EMBL; Sw:, SWISSPROT; Tr:, TREMBL; Wp:, WORMPEP;
CC   Information on the WORMPEP database can be found at
CC   http://www.sanger.ac.uk/Projects/C_elegans/wormpep
CC   
CC   Clone-derived Zebrafish pUC subclones occasionally display inconsistency
CC   over the length of mononucleotide A/T runs and conserved TA repeats.
CC   Where this is found the longest good quality representation will be
CC   submitted.
CC   
CC   Any regions longer than 1kb tagged as misc-feature "unsure" are part of
CC   a tandem repeat of more than 10kb in length where it has not been possible
CC   to anchor the base differences between repeat copies.  The region has been
CC   built up based on the repeat element to match the total size of repeat
CC   indicated by restriction digest, but repeat copies may not be in the
CC   correct order and the usual finishing criteria may not apply.
CC   
CC   DKEYP-55D6 is from a Zebrafish BAC library
CC   VECTOR: pIndigoBAC-5
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FH   Key             Location/Qualifiers
FH
FT   source          1..2223
FT                   /organism="Danio rerio"
FT                   /chromosome="10"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="DanioKeypilot"
FT                   /clone="DKEYP-55D6"
FT                   /db_xref="taxon:7955"
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SQ   Sequence 2223 BP; 649 A; 458 C; 255 G; 861 T; 0 other;
     tatgacagac tggttccgcc aaacaactgg ccactaattt tacaaggcga ccatctaagt        60
     tatcccttcc tgatggttta tctatattta tcattgataa tttttgctcc acttgttgta       120
     catttacttc tttcaattca aaagatagag ctgagttatc acttactatt ttttcaattt       180
     gcttttcact tgatataata ttatcagtta ccattttttc tctaagcttg ttcactttat       240
     ttataaaaaa atcattaaaa taattagcaa tttcatttga tttagttaaa aataaatcac       300
     ctgtctcaat aaaaaaagga gtttgacctg atttcctacc cattatttca ttaataatat       360
     tccacaattt ttttccatca tatttatttt cacttacttt tactttataa aatgtccttt       420
     tctttttcct attaatctta gttactttat tacgcaattt acaatagact tcccaatccg       480
     gtttattccc agttctattt gctatacctt ttgcctcatc tctttctgcc attatgttct       540
     tcagttcatt atcaatccac ggtgccctaa cattcttcac tgtgtgtttt ttcataggtg       600
     catgtttatc caccaaagaa taaaataatc tttcaaaagc tgttaatgca tcatcaggat       660
     gatcttcctt gtaaacatca gcccaatata tgttatttac atcattgcaa aataagtcct       720
     gacaaaattt tctatatgat cttttataaa taacttttgg tcttccttta gggacctttg       780
     tttttcttgc aatcgctatg atattatgat cactacaccc aatcggaaca gatacactct       840
     tagaacacat ttccacagca tttgtataaa tatggtcaat acaagtaaaa gttctcttac       900
     caagactatt tacatgaatt cttgttggtt gatcaataac ttgtgttaaa ttacatgcat       960
     taattacatt caccacttta gtttttaggg aacagtcctg agacatccaa ttaatattta      1020
     aatcacccat caagtaaatt tcatttccag tatcacatac attgtcaatc atatcacaca      1080
     attcacttaa ataacaacta tttgcacacg gtggtctgta acaacaacca acaagtaatg      1140
     atttaacaaa tggtaactgt acttgtagcc acagaacctc tacttctata ggcattaaat      1200
     cttgccttat ctttactgga atatgacttt gagtgtatat ggcaacccct ccaccatatt      1260
     tatttctatc tttcctatag acattataac catttatatt tactatatca tctgaaaatg      1320
     cttgatcaag atgtgtctca gttactgcta aaacatgaat attattagta atcaaaacat      1380
     cagatatttc atcaagttta ttccgaagac tacagatatt aatatgagct aattttaatc      1440
     ctttctttgg taacttaatt gatactgaca tgattcatag aaataaattt tcaatctcat      1500
     tcttattttc attaaatttc ctcaagctaa tttaagaaaa ccacagatct attacgctaa      1560
     cctaaggaag ccatagatct acttcgactt tgaggtcttc tttgatttcc tattgctatc      1620
     ttttgtaatt tgtgatgctg ggaatgtgat taatttatca taacgcaaat acgctatttc      1680
     tcctctctct cttgcagctc ttaattctgg cataagctcc ttcctcctta atcgcacatt      1740
     ttctggaaaa tcttcattca agtatatgtt tgatcctttg agatattttg ctctctccag      1800
     cactgcttct ttgtctttat acttaagaaa tttaaccaca acaggccgcg gtcgactaga      1860
     attcccgttt ctcatccttc ctattctgtg tgctttctcc aaggtaattt tgttttgatc      1920
     aagttgtagt ttctcttgaa ttatctgctt tactttctct tcagattcac accatttctc      1980
     atttggagat tctggaattc cttccaccac tatattattc tgtttacact gaccatccaa      2040
     ataattggct ttagcatcta atatcaacag agattcggct aacttttgta tatcatccac      2100
     atttgattta cattcagttg aatattctct acagttaact ttcaactcat ccacctcctt      2160
     ctgagtgaac tggagactta tcttcaagtc ttgtacctcc ttcatgagct catctactct      2220
     ttg                                                                    2223
//


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