Dbfetch

ID   CR855315; SV 5; linear; genomic DNA; STD; VRT; 5964 BP.
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AC   CR855315;
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DT   31-OCT-2004 (Rel. 81, Created)
DT   05-MAR-2015 (Rel. 124, Last updated, Version 8)
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DE   Zebrafish DNA sequence from clone CH211-206G18 in linkage group 6
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KW   HTG.
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OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
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RN   [1]
RP   1-5964
RA   Wright D.;
RT   ;
RL   Submitted (07-OCT-2006) to the INSDC.
RL   Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK.
RL   E-mail enquiries: zfish-help@sanger.ac.uk Clone requests:
RL   http://www.sanger.ac.uk/Projects/D_rerio/faqs.shtml#dataeight
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DR   MD5; 96036717ebacc1f485e1d29213a41f71.
DR   ENA-CON; CT992091.
DR   BioSample; SAMEA3146246.
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CC   -------------- Genome Center
CC   Center: Wellcome Trust Sanger Institute
CC   Center code: SC
CC   Web site: http://www.sanger.ac.uk
CC   Contact: zfish-help@sanger.ac.uk
CC   --------------
CC   
CC   This sequence was finished as follows unless otherwise noted: all regions
CC   were either double-stranded or sequenced with an alternate chemistry or
CC   covered by high quality data (i.e., phred quality >= 30); an attempt was
CC   made to resolve all sequencing problems, such as compressions and repeats;
CC   all regions were covered by at least one subclone; and the assembly was
CC   confirmed by restriction digest, except on the rare occasion of the clone
CC   being a YAC.
CC   
CC   The following abbreviations are used to associate primary accession
CC   numbers given in the feature table with their source databases:
CC   Em:, EMBL; Sw:, SWISSPROT; Tr:, TREMBL; Wp:, WORMPEP;
CC   Information on the WORMPEP database can be found at
CC   http://www.sanger.ac.uk/Projects/C_elegans/wormpep
CC   
CC   Clone-derived Zebrafish pUC subclones occasionally display inconsistency
CC   over the length of mononucleotide A/T runs and conserved TA repeats.
CC   Where this is found the longest good quality representation will be
CC   submitted.
CC   
CC   Any regions longer than 1kb tagged as misc-feature "unsure" are part of
CC   a tandem repeat of more than 10kb in length where it has not been possible
CC   to anchor the base differences between repeat copies.  The region has been
CC   built up based on the repeat element to match the total size of repeat
CC   indicated by restriction digest, but repeat copies may not be in the
CC   correct order and the usual finishing criteria may not apply.
CC   
CC   CH211-206G18 is from a CHORI-211 BAC library
CC   VECTOR: pTARBAC2.1
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FH   Key             Location/Qualifiers
FH
FT   source          1..5964
FT                   /organism="Danio rerio"
FT                   /chromosome="6"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="CHORI-211"
FT                   /clone="CH211-206G18"
FT                   /db_xref="taxon:7955"
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SQ   Sequence 5964 BP; 1826 A; 1227 C; 1191 G; 1720 T; 0 other;
     cttatagata cttaataatg tggctcaacg gacctcacca taacctgtgg ggctagagag        60
     atcccaagag ggcaagagag ggggaaggga tggaaataac tgcattcaac tggtgcggtt       120
     gagctcatcc aggatatgaa cagtgcgcaa ctatttagcc acatgtctct ggaggagcag       180
     atggccagcg agctgagaca tgcagtggtg gcacgcatcg cccaaatggt tgatgtacac       240
     tattgcagtc atgctgacca tcctaaccaa caagtgtttc acctcctgaa tcggtaggga       300
     ccagcaggaa tgaaaaacac tgccagacag ctccaattta attaaattcc tttttatttc       360
     tgtaacgctt ttacaacgtg gattgtgtca aagcagcttc acatagaata atatagtaaa       420
     ttaaaacagt gtcagtccag ttttacagag tttaagttca gtttagttca gttcagtgta       480
     gtccaaacac tgaagagcaa atccatcaat gcgcagctca agacaattga aatgccaatg       540
     caaccgaagt ttggtttaca aacctgcagc tgcatgctct atacacatag cacgctggcc       600
     catactggaa gcaactatca gacacttgtt ctaagggcac ccaggcctgt aaaaggcaag       660
     gtccatccag agcatggtca ccacagcatg gtctccgcac tccatgccca tctggggacc       720
     caattgcgaa gccagcacta aagtggtctt atatgaacaa tttgagtggc atgacagccg       780
     aatatcatat gccccaggag cctctgaaaa actacactga gatcactgca actgccgaat       840
     ttgtcagaca gggcagcgct agcccgatgt gctcttagta aagcgcaccg taatggagac       900
     cgagtccagc tccaacttga gataagagac gctctgtctg gaagagacct ttctgctctt       960
     tctcagttga ccagaaaccc caacagtttg aggtgccgaa gcaccaggtc ccgaagcacc      1020
     agttcaaaga ccgaaaaaag agacagtcaa tgaaaaatca aaaatgtgtg tttttgcatg      1080
     agcatcttga tcagcatcct gaaaagatgg cagatcaaga cacgcagata ggattggtat      1140
     aacccaccgc tctctgggta cgatgaagtg ggggcgtaaa ccatctccat tctggctgga      1200
     gcgaccagct cgattgaatc ctttgccagg tggaaaacaa tcgtctcttg ttagacaggg      1260
     gtggcatggc aatgccccct tgcacaattc ttatgcaaaa tggttaacat aaataaaaaa      1320
     agtaagcaac accatttttg aagcatgagt gtcatctttg aaagtgtaca ttcaagtggg      1380
     aagatgctgg aaaaccattg cacacaaacc acactcaaag taaatgtggc agctatcatt      1440
     atgatctgca gacttaaccc tcctcttgac caaggggtca aaatgggcca gacacaattt      1500
     taacagcaga attttttttt ttttttttca tcttgaaatt gtgtgacttt tcatgaaatg      1560
     gccacaacat tagaaaaaat aaaataaaaa attatatttt ccatgaaggt tgcgcatatt      1620
     aagggaacaa caattgtcct tctggtaaat tttgactcag cacctattgc cacacactgc      1680
     acacacatgc acacttcaac actcacatcc caagcccaca gacacaataa gaacctgctg      1740
     ctttaacttt tataaatact gtcttgctga aaacctttta cactaatgca gatacattta      1800
     tcattagaac ctatacccta aactttagtc agaaataagt gttgcctctg aataaacact      1860
     gataaaaagt ccacaatgat gatgaagttt cttcatgcaa aatagatttg acaatttaaa      1920
     taaaatctgt tttttttttt acaggtttgg tgaaggcggg tcatttttga cctgaagggt      1980
     taacagtgta tacggaattc taggacaaaa caaggattaa gatcattaaa gtttaaaatg      2040
     gccctcatcc tgatgttgac atcagttatg actcttggcc agtgctttga ttttggacct      2100
     aatgactgta aagtcattct taagtcaaga tgtggtcatg tacccatgtg tatcactttg      2160
     atacccccct tgataccacg agttgcctca gtggtcttgc aatgcccttt aggattgaaa      2220
     gcccacctaa ccagtagtaa tgcatccttc tggttttgaa caagtaggat ttttattcac      2280
     aacaactatg taaggccctt atggacgtgc tttgtcatct gagctctaaa cggtctctct      2340
     ctctctctct ctctctctct ctctctctct ctctctctct ctctctctct ctctctcagt      2400
     ttaaaaaaaa aaaaaaaaac agtataagtg ccaaaacaat gtaacctatg aagtgagtca      2460
     caacattaca gtctgtgatt tggagcaaaa gacataccga acacttgggt gaaaaaaatg      2520
     ggtaacagta gcaggctgta cagtatttaa ttgccttagt gaaggaaaac atgctacaat      2580
     ccattgaatt ggtggagcaa aagaaaatca aaggatgact tctgtggctg ggcacatgct      2640
     ttggaataat ctcttttatc atataaggtc tgctccttca tttgataaaa aaatattttc      2700
     ctaaattata tttctaacat tatccaagta gatttggatc tcaccaaaag atttatttag      2760
     caattatttg cttgctgtga ctgatttgaa gaactgtctg cacagcatca tgggtaatgt      2820
     agttttgttt tttgcaaaaa gttcctccat taaactgaaa tggttttgaa tatgctgact      2880
     tcataagatc aggtgggatt agcaacctct accatacaac taccatacag ctgatacatg      2940
     tgagggatgg agaaatgatg caagatattc ctttttctta tgttcttaaa ttcagtaata      3000
     gagcattctg tttgcttcat cggatgacgt cttattcaaa tgcgcattac agatgcatta      3060
     tttactctca aataatcaca ttaactccac ttgctgaccc tgctgacact ttacctatac      3120
     ctaaacttcc ccaccatccc acagttgtat atcactaacc aataaggcca atgcagtaaa      3180
     accctcagaa gagggccatc ccacagttga tcaggtgaag aaaacagagg tgtcactctt      3240
     cacaatgtgt gtgtgtattt gagtgtgtgt gtgtttcagt cctgaaatct gttcttaaaa      3300
     cctgtgaagg agagggtttg aattgatcag catcaagctg acagtgtctt tgtagtgggg      3360
     ccggaccatg ctgagttcat ggaattcaca ataagcttga ataaatgagt gctccggcac      3420
     actaaaggct tacataaatg aggaattatt agacactaac tgtactatca gggtcaaggc      3480
     ttgtgcttta aaacgactca agttgaacag tacagcaacc ttaaagacac atttttacca      3540
     tgcagtttta tttcaataat tgcattaagt gctatttact cagagtaagt tcaaacatgc      3600
     tgcatttaaa ttcacaagca ggaaaataaa cagagataaa tgtgtccact tgatccagaa      3660
     atgcctcagt gagtttgctc cacaataatg tacccggcct gtaaaatgct gattaaatta      3720
     gaggagcgct ccttcttaca atacaatgct ttcatcatct aataaatatt caacagatag      3780
     acggctccga aaacaaatat gagacatagt ttgcagttgt tttcatgtga catgaatgtt      3840
     tcattaagtg ctaaatgtag aaaagccatt ccaatttctt ctccagccgc aagctacacc      3900
     aaacccaaac tgaatcctaa tgagtttcct attacagcag ggaattggta gcagtctgac      3960
     tacaaagctt aatgtttaga ggtgaaatta gaacagcgtt gccagatcat ttgtctctgg      4020
     aaatacagaa aaatagacaa ttccactaca gcacgacatt accaaacctt ctccacaatt      4080
     cccgctcatc gcagatttcc accacaatca tgatcagcga ccatcaagcc gatctgagaa      4140
     gccggagaag tgtgaaattt tcattttagc actggcccgg gcaggttgtg agaggaaggt      4200
     gagtaactga ggttgttgca ggtcagtgat gatgtatctc ccataaggtg ttgtctgcgc      4260
     ctgacaggtg atgtagcggg tcatgaattg cctgtcttaa catttcaggc cctgcacgga      4320
     ccgatgtttc agatgctgtt gcggaggcat tatgaggaag agccacctgc tcgtggataa      4380
     ggtgatcaat gaacagggag ctttcagtgg gcgccatacc agactcttat tgatgtttca      4440
     ggactgaggt ctaaatcgat ggcagctgtt tgagtctgac tgagctaact gtgcttaacg      4500
     ccagctctga aggtgaaatt aattgattga agggatgaca tatattggag atgggtgtca      4560
     atctgtgttt atttatgctc ccatgagcgg tttgaagagg agggcggggg cgtctaggac      4620
     aagaagagct cgggacaaga agaactcttt ctttttccat ctttttccat ctttttgaaa      4680
     tggctggaaa gaggtgctcg actaaaaaga gaaaagtata ataataatgt caattagaaa      4740
     aagtgaaaca ctcactcttg aagaaatcca actttatatg taagttttca ggcattatgc      4800
     agatgttcat caagcccact ttatctcaat gtctttggtt cctcagtggt agtttgatgc      4860
     aattagtggc attgaaagtc gttgaatggc atcaagtttt aatgcgtttt tgccactgag      4920
     aatgtgccca tgatggcgga ggctcctatt aaaacaaaga caggtggtga tgatggtgcg      4980
     ttcacccctg tcagagctgt gtcatgagca gaatgatagt aattagtgtg atgcaaggag      5040
     tgataaaaat atatgcagct agtgtaatga cgtttttttt tttttttctt ttgaaagttt      5100
     tagaaaggag ccaactttaa cagctgatgt ttgaagaact tcagacacca tgtcattttt      5160
     ttgcacttag atacagtaaa atagtattgt gatgttaata atagctttac ttggcattaa      5220
     ttgtaaaata tcaacaggct catccagcaa ttaaccagaa atattgactg catttttatt      5280
     cattcgttta ttttcttttc ggcttagtcc ctttattaat ctagggtcgc cacagcggaa      5340
     ccgccgactt atccagcata tgttttatta catacttatc cagcggatgc ctttccagat      5400
     gcaacccatc actgggaaat ggctacattt taatgcattt caggcaagta gttatagata      5460
     tgttactaca aagaacttac aatataataa attttaacat tttaataaac agaaaaagag      5520
     tttccatatt ttataatctg cgttcacact gacttttttt cctttctatt aaactataaa      5580
     tcttctataa gactataaat ccaatctact tttattgttt ataaccttgg taataatatt      5640
     aataataata atagtcatta attcattttc ttttcggctt agccccttta ttgatcaggg      5700
     ttcgccacca tcttatccag cacatgtttt acacagcgga tgcccttcca gccgcaaccc      5760
     aacactggga aacaccaaca cacacttata cactacggcc aatttagctt atacaattca      5820
     cctgtagcct atgtctttga actgtggggg aaaccggagc acctggagga aatcctggga      5880
     ggaacacggg ggggtcatgc aagctccaca cataaatgcc aactgaccta gccggggctt      5940
     gaaccagcaa gcttcttgct gtga                                             5964
//