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EBI Dbfetch

ID   CR854928; SV 13; linear; genomic DNA; STD; VRT; 3601 BP.
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AC   CR854928;
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DT   25-OCT-2004 (Rel. 81, Created)
DT   26-SEP-2005 (Rel. 85, Last updated, Version 19)
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DE   Zebrafish DNA sequence from clone DKEY-145G5 in linkage group 4
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KW   HTG.
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OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
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RN   [1]
RP   1-3601
RA   Dunn M.;
RT   ;
RL   Submitted (24-SEP-2005) to the INSDC.
RL   Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK.
RL   E-mail enquiries: zfish-help@sanger.ac.uk Clone requests:
RL   http://www.sanger.ac.uk/Projects/D_rerio/faqs.shtml#dataeight
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DR   MD5; ccb0b7b97f71f29113ac99a0a1736dc7.
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CC   -------------- Genome Center
CC   Center: Wellcome Trust Sanger Institute
CC   Center code: SC
CC   Web site: http://www.sanger.ac.uk
CC   Contact: zfish-help@sanger.ac.uk
CC   --------------
CC   
CC   This sequence was finished as follows unless otherwise noted: all regions
CC   were either double-stranded or sequenced with an alternate chemistry or
CC   covered by high quality data (i.e., phred quality >= 30); an attempt was
CC   made to resolve all sequencing problems, such as compressions and repeats;
CC   all regions were covered by at least one subclone; and the assembly was
CC   confirmed by restriction digest, except on the rare occasion of the clone
CC   being a YAC.
CC   
CC   The following abbreviations are used to associate primary accession
CC   numbers given in the feature table with their source databases:
CC   Em:, EMBL; Sw:, SWISSPROT; Tr:, TREMBL; Wp:, WORMPEP;
CC   Information on the WORMPEP database can be found at
CC   http://www.sanger.ac.uk/Projects/C_elegans/wormpep
CC   
CC   Clone-derived Zebrafish pUC subclones occasionally display inconsistency
CC   over the length of mononucleotide A/T runs and conserved TA repeats.
CC   Where this is found the longest good quality representation will be
CC   submitted.
CC   
CC   Any regions longer than 1kb tagged as misc-feature "unsure" are part of
CC   a tandem repeat of more than 10kb in length where it has not been possible
CC   to anchor the base differences between repeat copies.  The region has been
CC   built up based on the repeat element to match the total size of repeat
CC   indicated by restriction digest, but repeat copies may not be in the
CC   correct order and the usual finishing criteria may not apply.
CC   
CC   DKEY-145G5 is from a Zebrafish BAC library
CC   VECTOR: pIndigoBAC-5
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FH   Key             Location/Qualifiers
FH
FT   source          1..3601
FT                   /organism="Danio rerio"
FT                   /chromosome="4"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="DanioKey"
FT                   /clone="DKEY-145G5"
FT                   /db_xref="taxon:7955"
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SQ   Sequence 3601 BP; 1123 A; 568 C; 643 G; 1267 T; 0 other;
     gctctcgatg atttagttca gttcagtgct gaaaaatgtt tttttttttt ctttttaaca        60
     ggagaatgaa cttgaaggcc acacaaatca cataatgaaa ttggtagtga ttaaaaaccc       120
     cacagctgag gtggacccag tggatgtgtg tgtcgtcata gagggcagca gagtgctgaa       180
     cggttgtggg aacataacca cagcatgcac attactgatg ggacttatct atgcactcaa       240
     ccttcaatat gccaaaaacc tcaagtacac ttttgaagtg ttccagaaac tgtttttgga       300
     acttgatgga atgaagctgc taaaaaagat ccaaagcctc aggtgtaagc tactggaatg       360
     agctggcttc atccagtaaa gacactgttc tatatgtaaa tagtattgtg ttccaattac       420
     aattttttta aatgttttat gacgttgtgt tgggggaaat ttaatgcact tgtacctaat       480
     tagtgttttt tcaaatgttt ttcaaaatgt ttaagaagtt gcatgcaatg caagttatat       540
     gaagttgtat tttcctaaaa attgaatcta agagcatttt tttgttttgg tttaaaataa       600
     aaattggtga aatgttggca tggcattctg ttgaggtaaa ggagattttt ttcatttagt       660
     tttttttttt gtattttttt ttattctcat ttcagtgact ccttttattt gtgttgcaag       720
     tgttgcacac gtatctaaac actgaagttt taattttgga atgtgttcag atgggtggaa       780
     aacataatat ggaatgttta atgctttatg taatgtattt cttttgaaat tcatgctaag       840
     gtgttttgta cgtacttttt ggtaaaaacg tacctttttt gtacttgcat tttttttgta       900
     ctttcatttt tttattacat ttttaaaatg ttttttaaaa atgttttgtc aataaaaaaa       960
     gcaattgatg caatctcctg cttctgacaa tttttaagta aattcaacct ttaatgaaaa      1020
     aattattttt gattattctt attgggtaat aattaataat agtaaattag tagatggact      1080
     gttgcttact aacatagagt tcatgttact caattattat aagtaataat ttatgtaatc      1140
     taatgtaaaa tattaggtag accgtaccta attttttgca gtttgtcaga gctgttaaat      1200
     tgaggtattc tttatataaa tatatagttt ataatctacc caaacaaagt aagtgcaaat      1260
     tcttacctca gttttattga gtaaattcta taggttgttt tttacagtgt ggaggcaggt      1320
     cctgcacatt ttcagttgac attatgttag tctgtattta tcctggcatg gtttctgcac      1380
     agcggttctg cagcagtgct ctgctcagtc aacactccgt ctccaaactg tctgaagctc      1440
     acgcatgact aacaggttta caggaactga gtttaagcac ataagagaat atcaacaaat      1500
     atatcaatcc tgttctgcaa ccactggaaa acaaggttgt tatgaacgct tggaaagaga      1560
     aacagtgagt ggataataat aatagtaata ataatgtgtt atatttatac agcatgtttc      1620
     tgagcattca gtagtcgttt ccctcatcac tagcaaatat acccaaatac acaacagtgt      1680
     acaacagtaa tactgcacct gacaaaaaca tcttaggttg acagtgtaaa aaatgacacc      1740
     tttttaactt gtatttaatg tttaaaatgc aaatcctatt agattcactt tatttgataa      1800
     acaaagcaag tctctcatat aataccaaaa gacagaacat gtgactgtac acactgcatt      1860
     gcacataaac cagctgaaca ctttcatatc agtcaataac attactgtaa ttaatttaat      1920
     aactgaataa atatccatgt acacacattt actccagtaa atgaacagaa tcaatgatgg      1980
     gctgaacatc tgctgaattc tgcatgctga ttccgtgtgg gcctactaat gattaacaac      2040
     actgaagtgt attgtgttcg tcactggaga ttcattgctg tagttcaggg gtcaccaaac      2100
     ttgttcctgg agggccggtg tcctgcagat gttagctcca accctaatca aacacacctg      2160
     aacaagctaa tcaagctctt actaggtata cctgaatcat ccaggcaggt gtgtggaggc      2220
     aagttggaga taaaccctgc agggacaccc gagattggtg acccctgctg tagtttttcc      2280
     tccatcacat taataaacat gtgcttagat ttgtaataat ttacagataa ttatataaca      2340
     tctattgaat cctgctgaat caaaagttag gatttaaaag gattaaatta ttaactactc      2400
     atgtattaat gcttttcaga tatttcaatt ttcatattct ccgtatttgt tgcgttacat      2460
     tattattctg taactctgac tacatgcata aactcaggaa ataatattcc tttaaaaact      2520
     tttaatattg ataaaaaagt aggaaactat agtgaaaaag atgcatgttc tttaaataaa      2580
     gtaacacatt atatgtgcat acatgaagag tttagatgca aaaaccttta aatgtcgtct      2640
     gagatgagcg ttttttccag gctcttgtgt gtatgatcag taatttcact tttaaggtga      2700
     agaataagtt cttttcatgt cttcaaagtg aaataagtca acacaaacaa agcagactga      2760
     gaacagtgct cattttcagt ggacatttca gacggcactc agcggtctct gcatctgaac      2820
     tcttcatgta tcatgatggc tcttcagaca gtttgcattc tgagatggga ggtccctgct      2880
     aaaaaatcca gcttaaacca gcctaggctg gtttaagctg gatttttcag caggggtttc      2940
     tgtaggattt atgttgtttg gaattcttca ctacaggaag ttcttgtaaa aactcatgtt      3000
     gttcatgatc atgttttttt tttaattcat acttgtaaat aggctgatat ttatcttcta      3060
     aataatacat gttgatgata ttaaataata aaaaagcctt taattggact tttaaatgcg      3120
     ttttttcgat gtgtttacag ggggaaaatc tctaaacacc ttcatgaaga gggttttaat      3180
     attgatagat gtttggcatt aaagaaacat gaataattgt gactgtgtat atacgctgtg      3240
     ttgttggttt ctgtcatgca tttgggtcaa atatcagact ggtgtcgagc tcgtggtttt      3300
     gtcgcatttc tgtcattgtt gtgaagctga tcatgatcac actgatgctc acacatctat      3360
     catatatgat aatcagactg tgctgtggaa taaaagatat atttctgttg aagagcacag      3420
     ggaaatgtgt tttatttcag attcatttta aaaaacaata acctttactc tgagtcttct      3480
     gtaatcaaca gatatgatcg ggttattaaa tctttcaaaa cttatacatt attgtaactg      3540
     tacagtgaac acgcactcat ctgtgttcaa gtctcgcatt attagtactc atgacaagct      3600
     t                                                                      3601
//


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