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EBI Dbfetch

ID   CR854860; SV 1; linear; genomic DNA; STD; HUM; 6932 BP.
XX
AC   CR854860;
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DT   22-OCT-2004 (Rel. 81, Created)
DT   13-JAN-2009 (Rel. 99, Last updated, Version 10)
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DE   Human DNA sequence from clone XX-BQB97F8_109B10_2 on chromosome 6
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KW   HTG.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-6932
RA   Palmer S.;
RT   ;
RL   Submitted (09-JAN-2009) to the INSDC.
RL   Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK.
RL   E-mail enquiries: vega@sanger.ac.uk Clone requests: Geneservice
RL   (http://www.geneservice.co.uk/) and BACPAC Resources
RL   (http://bacpac.chori.org/)
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DR   MD5; b45ae9f5b7318186b8776d42226d7414.
DR   ENA-CON; GL000255.
DR   Ensembl-Scaffolds; CR854860.1:1-6932; homo_sapiens.
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CC   -------------- Genome Center
CC   Center: Wellcome Trust Sanger Institute
CC   Center code: SC
CC   Web site: http://www.sanger.ac.uk
CC   Contact: vega@sanger.ac.uk
CC   --------------
CC   
CC   This sequence was finished as follows unless otherwise noted: all regions
CC   were either double-stranded or sequenced with an alternate chemistry or
CC   covered by high quality data (i.e., phred quality >= 30); an attempt was
CC   made to resolve all sequencing problems, such as compressions and repeats;
CC   all regions were covered by at least one subclone; and the assembly was
CC   confirmed by restriction digest, except on the rare occasion of the clone
CC   being a YAC.
CC   
CC   The following abbreviations are used to associate primary accession
CC   numbers given in the feature table with their source databases:
CC   Em:, EMBL; Sw:, SWISSPROT; Tr:, TREMBL; Wp:, WORMPEP;
CC   Information on the WORMPEP database can be found at
CC   http://www.sanger.ac.uk/Projects/C_elegans/wormpep
CC   
CC   This sequence was generated from part of bacterial clone contigs
CC   constructed by the MHC Haplotype Consortium and collaborators.
CC   Further information can be found at
CC   http://www.sanger.ac.uk/HGP/Chr6/MHC
CC   
CC   IMPORTANT: This sequence is not the entire insert of clone
CC   XX-BQB97F8_109B10_2. It may be shorter because we sequence overlapping
CC   sections only once, except for a short overlap.
CC   
CC   During sequence assembly data is compared from overlapping clones. Where
CC   differences are found these are annotated as variations together with a
CC   note of the overlapping clone name. Note that the variation annotation may
CC   not be found in the sequence submission corresponding to the overlapping
CC   clone, as we submit sequences with only a small overlap.
CC   
CC   The true left end of clone XX-BQB97F8_109B10_1 is at 6833 in this sequence.
CC   The true right end of clone XX-BQB97F8_109B10_3 is at 100 in this sequence.
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FH   Key             Location/Qualifiers
FH
FT   source          1..6932
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /mol_type="genomic DNA"
FT                   /clone="XX-BQB97F8_109B10_2"
FT                   /db_xref="taxon:9606"
FT   misc_feature    6733
FT                   /note="Clone_left_end: XX-BQB97F8_109B10_1"
XX
SQ   Sequence 6932 BP; 2211 A; 1244 C; 1322 G; 2155 T; 0 other;
     ttgtttaaga ctagcctata agttagttac acatgcaaat aaacagtttg gtttctttac        60
     tagttataca tagaaagaaa caggttggta agattttgcc cagctagtcc tcaatttatt       120
     atcagactta agtataaata ggagagttgt actgatgcat ggatagacct atagacaaac       180
     gaacagaaac agcaggccca gaaccaactc actcatatgt aaaatcatat ttatgttgga       240
     gttggcattg gaattcgctt atgaaatagt gcagtaagtc atcctgagag aatttgttat       300
     ccagacggaa aactcagtgt tggattcata caacatagta tccacaaaaa tcaattcaat       360
     tcaggctaat caaatgtgaa caggaaccac agtgaactat caccttatcc cagttggaat       420
     gcctactatc aaaaaggcaa aaaaaaaaaa aattgctggt aaggaggagg gtaaaaggga       480
     acttttatac accattagta gaaatgtaaa ttagtacagc cattatggaa aactgtatgg       540
     aggtttctca aaaaactaaa aatagagctg tcatatcatc cagcaatccc attactgact       600
     atttagccaa aggaaaggta atttttaaat ttttaaaata gaaaatttag aagattattt       660
     tatgaactga agtagggaag tatttcttaa cagggatgaa atagcaaaaa aaatttttaa       720
     tttttaataa atatacttta atacatattt ttaaaaactt aatcaaaata cactttaaaa       780
     atatgacaca aactggaaaa agttattttt aatacatata atataggaaa attaagctgt       840
     aaaaactaaa atttaagtct tataagctta tatctatcta tacatatgac atttttatat       900
     ttataaaaat aataagaaat tcagtgccac tccagggatg agagctagct tatgaaaagg       960
     aagcatagca ggtcaataca taatgtgaaa agatttccac gcttattagt aatcagataa      1020
     acacatttca aatcactacg aagtatcatt taattctcaa gagatgggca aaatgaagtc      1080
     tgacaataat ttattggcaa gaaaattcat tagtgtgaac aattaaacac ttctagtggg      1140
     ggttgaaatt tatacagcta gttatagtaa agttgtaaac acaaatatag tgcatagaac      1200
     ttctagtctt aggcatttgt tctaaagaaa cattaggtat ttggacaagg aagcatgcac      1260
     agggatgtta acagaggtgt aggtcataat agcaaacaga aagaaaagaa ataaccagaa      1320
     ttctatcatg gaaaaggttc tcagaagcaa aattcctgca cccttggtta tggatccaca      1380
     gaggcttaat gtgaaggggg cattcagatc aaatgctcaa agtggagtaa gatatcattg      1440
     tctttcacag aatcacttca tagactgcag cagatctccc ttgaccaacc ccccgaaacc      1500
     agtcaaattc ttcattttcc ccaaagtgag gactcccaca ttaagaagcc ctcagtactg      1560
     agataactag cgataaattt atccattgca agggtggtct tgatgcaggg ccagcaagcc      1620
     tcaaaactgg ggcttcaccc gagagtgttc ttggcttcac tcgggaaaga ttccaaggat      1680
     gagacagtgg tgttagacag caacttttat ggaactaagc tactccttga agagcagggt      1740
     taccctatag gcagtgtgcc cagaatagta gctcagaggc agttctgcag tcatatttat      1800
     acccactttt aattatatgc aaattaagag gtggactatg cagaagtttc tagaaatagg      1860
     gtagaaattt ctgcataatc caccccttaa tttatagatg gtaactccaa ttaccacttc      1920
     aatgacccca gtgggtcatt attgccatgg aaagaagtgg taacctctgg gtgttgccat      1980
     ggcaatggta aactgacatg gcacactggt aggcatgtct tatggagagg tgcttctgcc      2040
     ccatccctgt tttagttaat tctcaatttg atctgatgtc tgagcctcac ctactacttc      2100
     agtcttatga cccccagact ccccagctga taagaagatg catgagtaaa ggaggcaatt      2160
     gagagatgct tcctttcagt gtccaagtgt caaaaagaat tcttagtctt aattaaaatt      2220
     tagatataag aaatctactg aaagaaagtg attacagaat ttacaagttg atttggtgat      2280
     gcctcagcaa gagtgagaaa tatacaataa actacaagac agaaaatcca taagagctaa      2340
     aaatgagcat tttgtggtac caatcttgct gtaaaaatct taatattttg tgtatctttc      2400
     tcagcactag actagaacct atatgccaat gggtagtgat acacatctgt cactggtaaa      2460
     gttgcatacc aattcacaat cctattctca tacccaagtt attactacac attgctcttg      2520
     agtcagtagc tgcatttgcc accctggctc aaaatatcag ccatcacatt tagtaaattc      2580
     tatcatacaa agcaaattag cactgattta tcagatttac caatgggtgg ggtgaggagg      2640
     aggagggcgc tggctgactt agcccaggcc ctgaagagcc ctgttccaga gaatatgctt      2700
     gtgctcttcc ttatggccca gcatatgcac agggctccag tcatttgcct ccagcaggag      2760
     gctcttccac actcattcac agtcagctgg attccaatct ctgctcaagt gtgagcaatg      2820
     cagatccagg cccctggtta atgtagtcat cactgttcaa gcccagtctc tttcagatgt      2880
     tgagacagtg gccctaactc tgtgtggctg gcccagagct gtgcacctac cctcactttc      2940
     ataccacatt aatttcagat ccttattgtc acgggtttcc caactacttt tttttcttca      3000
     ggggaaacct ccacaatgta gtttctaata tgttgaattc atactccaga aagtgtcctg      3060
     tagaataatg tcttactgaa aacggccatc acagccagga gtccttaact atgttcttcg      3120
     atacccttag ttacagtttg ttgtcatgtt cttcacatct tgtgtgaaga ttgttcaagt      3180
     gttggccaaa ggatatgtca ctatctaaaa ttcacattga gaacctcaga gtaactaata      3240
     ataagtgtga tgcttgtagg aaaagaagag ctatttggtc acaggatgtg gttattagaa      3300
     tagggttgtg gttgaagggg aaggatgatg acataaatct ttgcataaac cacattaaca      3360
     tgaaaccttg atattatcat tacatacttt tctttttatc taataaggca aagtagagaa      3420
     gtcagcatca tttgtctctg gcagactaaa ctgtcaagaa ggcataccca aggttggtgg      3480
     cagggggagc ttcattagca ttaggaataa tagaaaatat caaagaataa gttttgtaag      3540
     aaatacatag actcaacaga aagtaaaaaa tgtactttac tgaaaagaaa acaaactata      3600
     aatgaatcat gaagttggat ggagatataa tctatagatt taaaactatt tttattcaaa      3660
     ataatgagat tttaaaaaat aataaatgtt ctgaaagtct aggataagta tactgtcctg      3720
     tattgttgat tttttaaaga gtagtagagt gtattatata gcatattata taaaggcatg      3780
     ggcctgagtt aggcagtctt tttgtttgtt gaggtaaaat tcatataaca aaattaaccc      3840
     attttaaggt gcacaactca gtagcattta gtgcattcac ccatgttgta caaccatcac      3900
     ttctatgtag ttccataaca ttttcatcac ctccaaagga gaccttgtat ccattaagca      3960
     gtcactcccc attcccactt cctcctcagc aaccacaatc tggttttaga caggtcttgt      4020
     tttgcatcta gggtggtgat ttctacatca atctatgcag aaggagctta ggcccagaat      4080
     tctgcatggt gggtagggac tgtggcttgt cttgaagcta gatgtgcttg catagcaaat      4140
     gctttatctt tatttatgtg tgtttgggtt atttaaaaaa gaatgtctta taaatattat      4200
     ggctatattg ttaattttca aagtgttttt gttgttttac ctatggagaa aagattaata      4260
     ccaatttgat ttgttttaca aagggactac attcttcaat gtttgtgaaa ataataatta      4320
     aaattttgtt tggctgtgtt ttgtgtatat atttaaagct gtcttgaatt tctaatctat      4380
     ctgttttaag tttttctttt tgtttatcct tattgcgctc ttaaaatgtt ttctgtttct      4440
     tcatattatt ttacatgtaa gagcgactaa aaaatggtca tgagtttgaa gaaatcagat      4500
     ggaatttggg gctaatgttt cagggtctga ttccttcact gggggaccat gaaggccata      4560
     gcgtggaatt attttctctg ggcccattca atttcttctg agaggaaact tcatgtattt      4620
     tgtttgaggg atagatgcca gccacctatg tggcagaggt cagagtggaa gagaggtggg      4680
     gttagctgtt ctgcatataa tctttcaatt aatctcctta agtgtcccca agtttttttt      4740
     taaaaatgtt taaataaata ctctttcaag tatatggtga agtttttaca gccactaaaa      4800
     ataagatttt atgaaactgt ttagtgatgt agaaaattgt ctaatctgtg ggaaattatc      4860
     cacagattaa gtaaaaaaca aaaaactaca aagactaata ctacaattct gtaaatgcat      4920
     ctatactgtg atatttatat ttataaaaac aggaaggatc ttaatgacac tcagaagact      4980
     atgattagat gatagaagaa ccactacatt tttctcctcc caacagtctt aatagggcct      5040
     gcaggtctaa ggtgagtggc cttgaaaaat ctctgttcag ggaaatttgt atggaacatt      5100
     ttaatgtgga cattgtgtag aactttgcct atactgtccc tgtagtgtct tttttcctct      5160
     tctgcaggtc ttcatggtcc cctgggatca tagccacaag gtttctgttc ccagttgagc      5220
     tctcaggtct acttttcaat ccttttacat aactttaccc atctctacct ctcccttccc      5280
     tccaaagggt tcctttttat ccactgtcct catggaagta aaacaatgac ctcaccatac      5340
     ctcacaaata aacagaagaa gaaagatgtg aatcctccct aaatctgatg tcttaaactt      5400
     gaaacccatg aaccctgtgg tactcaggtg agcagagata gaagagcact acgcaggttc      5460
     acactctttt ccctgaagaa ggaaaaattc agaaaaaaac tccagtctgt agttttagag      5520
     caacgttttt gtgggaccct cccagactgg aaatttgtgg tcctcctctt ctggggttgg      5580
     gagcaagccc tgaatcttca gtgccatgta gcctggtcta agctcaggaa catttcttta      5640
     cgttttgatg aagctgcaaa gttttattag ccataacatg tttgaatctg taagatttct      5700
     aagtaagtct gacaataaaa tttcagattc ttcagctgac cggaagactt caaagtgcct      5760
     tcacttttta aatcacctgt agatgaatta tactggacct gaccaaaagt gtttatctgt      5820
     gcataaatca aatacagtca actttcccta tccaaggttc cacatctgtg gattcaacct      5880
     accatggatt taaatctgtg gatatgggtt attacagcat tttatagaag aggctgagca      5940
     tccacagatt ttgatatcag ctgggttcct ggaaccaatc tcctgggggt acagagccac      6000
     agtcaagtat gagaaacaaa gagaagagga agggcccatt tctgcccata agtcatctac      6060
     agaggagggc ttaatcagct gcattaatgc agatttccac ctcagggctg gccctggaga      6120
     aacacctcta gatgaagaca attggatgtg taagtggcca gatccacatg caattacttc      6180
     tttagaataa taaagttgtg gcttgacaaa tggtcccttg tctgtgatag gagtcgtggc      6240
     ataaatcccc ttctgggcta cagtgtagca caattgccct ctctctagtg tgtcactctg      6300
     aagttagact gcctgggttt gaattctggc tccatttctt actagtggtg tagctttagt      6360
     caagtatcca actcatttcg actttctttt gatttccttt gcatggtgta tatttccatt      6420
     ctttttactt ttaatgaagg tatgtcttta tatttaaaat gggttgctga tagtttacag      6480
     ttcaatattc catttttatt caatctgttc ttctccattt cctaattggt aaaatggggg      6540
     agggagatat aataatacac ctacttaata gtatcattct aaaaattaag tcagttaata      6600
     caagtatggt aaaagcaatt agaagaacat ctggcatgtg gtaagtactc aatacatatc      6660
     aggcactatc atcttactat caattattat tatcatcatc atgactggga ggtaacatgg      6720
     caattagtct tcattttctc accagcctgg ctgatgaaca tccagtatat ctgaagagaa      6780
     agtttcagaa tcaaaaacaa aaagaggcct ggctttcttt atattgggtg gaaataagga      6840
     ggagggaagg aatatgagag gaacaggtaa tttgtccttt tagttttatt ttaactacct      6900
     ccaggaaatt aacctattct cacatatctg gg                                    6932
//


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