Dbfetch
ID BX120004; SV 8; linear; genomic DNA; STD; HUM; 4836 BP. XX AC BX120004; XX DT 27-JAN-2003 (Rel. 74, Created) DT 13-DEC-2012 (Rel. 115, Last updated, Version 19) XX DE Human DNA sequence from clone DASS-211F20 on chromosome 6 XX KW HTG. XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-4836 RG Genome Reference Consortium RA Wood J.; RT ; RL Submitted (13-DEC-2012) to the INSDC. RL Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK. RL E-mail enquiries: grc-help@sanger.ac.uk Clone requests: Geneservice RL (http://www.geneservice.co.uk/) and BACPAC Resources RL (http://bacpac.chori.org/) XX DR MD5; cd091b680c46911c621b4d5dcbeb55be. DR ENA-CON; GL000256. DR Ensembl-Gn; ENSG00000223980; homo_sapiens. DR Ensembl-Scaffolds; BX120004.8:1-4836; homo_sapiens. DR Ensembl-Tr; ENST00000414592; homo_sapiens. DR Ensembl-Tr; ENST00000612644; homo_sapiens. DR Ensembl-Tr; ENST00000638335; homo_sapiens. DR GOA; A0A1W2PS39. DR GOA; Q9GJ45. DR HGNC; HGNC:4931; HLA-A. DR IMGT/HLA; HLA-J*01:01:01:06; HLA02632. DR InterPro; IPR001039; MHC_I_a_a1/a2. DR InterPro; IPR003006; Ig/MHC_CS. DR InterPro; IPR003597; Ig_C1-set. DR InterPro; IPR007110; Ig-like_dom. DR InterPro; IPR010579; MHC_I_a_C. DR InterPro; IPR011161; MHC_I-like_Ag-recog. DR InterPro; IPR011162; MHC_I/II-like_Ag-recog. DR InterPro; IPR013783; Ig-like_fold. DR InterPro; IPR036179; Ig-like_dom_sf. DR InterPro; IPR037055; MHC_I-like_Ag-recog_sf. DR UniProtKB/TrEMBL; A0A140T975; A0A140T975_HUMAN. DR UniProtKB/TrEMBL; A0A1W2PS39; A0A1W2PS39_HUMAN. DR UniProtKB/TrEMBL; Q9GJ45; Q9GJ45_HUMAN. XX CC -------------- Genome Center CC Center: Wellcome Trust Sanger Institute CC Center code: SC CC Web site: http://www.sanger.ac.uk CC Contact: grc-help@sanger.ac.uk CC -------------- CC CC This sequence was finished as follows unless otherwise noted: all regions CC were either double-stranded or sequenced with an alternate chemistry or CC covered by high quality data (i.e., phred quality >= 30); an attempt was CC made to resolve all sequencing problems, such as compressions and repeats; CC all regions were covered by at least one subclone; and the assembly was CC confirmed by restriction digest, except on the rare occasion of the clone CC being a YAC. CC This sequence was generated from part of bacterial clone contigs CC constructed by the MHC Haplotype Consortium and collaborators. CC CC DASS-211F20 is from a DNA-arts SSTO human bac library CC VECTOR: pBeloBAC11 XX FH Key Location/Qualifiers FH FT source 1..4836 FT /organism="Homo sapiens" FT /chromosome="6" FT /mol_type="genomic DNA" FT /clone_lib="DNA-arts-BAC.1-SSTO.1" FT /clone="DASS-211F20" FT /db_xref="taxon:9606" FT misc_feature 2109..2140 FT /note="Sequence from clone PCR only." XX SQ Sequence 4836 BP; 1126 A; 1243 C; 1373 G; 1094 T; 0 other; acttgtctgc agtcctgtct actctgaaga ctgaggcagg aggattcctt gagcccagga 60 gtttgaggct gcagtgagcc atgatcatgt gactgcactt cacgctggat gacagttttt 120 agagactctg tctctaaaaa caaataaatg aatacaataa ataaaaacaa ataaataaat 180 acaataaatg ggtgttgttt aaagccaatg tttgtgataa ttttttacac agtcttataa 240 aattcataca caggctcaac agactaatgg aatgaactga tgaattgata tatacactag 300 ttacataaaa taaaatcttt ctgaactttt tcagtgtttt gcattttata attatctgtg 360 atgcaattta atatactcat atttcattca ttcagtcaac aaaaattaat ttagtcccta 420 caatgaacca ggtatcccct catatgctca cgtgcctgac attctagaag cttcacaaga 480 ccaaggtgga gccactggag tgttttaggt ggagaaatga cacactttga ctcacattag 540 caggaccact atggagagaa cagtcacgta gcaggtaacg ggagagtgcc agtgtcacaa 600 ttcaggagtg acagtgtgat ggggactaag gggagaggag gggctgagtg ataagaggga 660 cggagggaag ggctggagaa gcagtaggtg aggaaaagga gtagagggat agaattcaaa 720 agcagcacaa ctcttaggtt tgaacacttt ttttaatggt atttcaatag atccatctac 780 agagcctcgc agggtgttac ttgcagttgg cctttaatac cttaagtggg tctgcttaaa 840 aactaattgt ttttatgtta atcaggtttt aaaaatacta agtgttccta agaaatatac 900 acaccactta gatgtggata cttcctaaaa acaggcagtg catgagcact ggtgatggac 960 attgtgactg catcgagcgc ttgcaacttt gaggtgaatg aagtctgtac tgactcctgg 1020 ttgcaacaca taggaacaca gtggctactt tgtattgagg agatgtcctg gactcacaga 1080 aactcagggc tatggaataa aggtaaattt aaaacaccac aagcgggagt cacagatacc 1140 ttgtttgcaa aagtgaaact taggagcttt gtgagtcctg ttgtaatgct tttagacact 1200 ttatatatca aggggccaaa gtcacatgtt tttaccgatt agattcctga tcattcaggg 1260 gttaccaaga ttctgctacc cactgtagtt aatacacaaa aagcaaactg gtctctatac 1320 tatctcatgc acccaggcac aacttttcca gatttaaaga aaaagaaaaa agaaataaaa 1380 gaaaaaaacc tctgtctcta cacctccatt cccagggaga gctccctctc tggcaccaag 1440 ctccctgggg tgagttttct ttttgaagag tccaggggaa caggtaagca gtggggaagc 1500 agggagtcca tttcagggac aggaattccc ggatgaaaag tgaaaggaga gggacggggc 1560 ccaagctgag ggtttcttcc tggtttctcg gacagctcct ggaccaagac tcagggaaca 1620 ttgagacaga gcgtttgtca caggaggagc ggggtcaggg cgaagtccca gagccccagg 1680 catggctctc agggtctcag gccccgaagg cggtgcatgg gctggggagg tgcagcattg 1740 gggattcccc atctccgcag agtttctctt ctccctctcc cagcctgcga cgggtccttc 1800 ttcctggaca ctcacgacgc ggacccagtt ctcactccca ctgagtgtcg ggtttctagg 1860 gaagccaatc agcgtcgcgc ggccccggtt ctaaagtccc cacgcaccca ccgggactcg 1920 gagtctcccc agacgccgac gatggggtca tggcgccccg aaccctcctc ctgctgctct 1980 cggggaccct ggccctggcc gagacctggg cgggtgagtg cggggtcagg agggaaacgg 2040 cctctgccgt gaggagcgaa aggtccacct ggctggggcg caggacccgg ggagccgcgc 2100 cgggaggagg gtcgggcggg tctcagcccc tcctcgcccc caggctccca ctccatgagg 2160 tatttcagca ccgccgtttc ctggccgggc cgcggggagc ccagcttcat tgccgtgggc 2220 tacgtggacg acacgcagtt catgcgggtc gacagtgacg ccgtgagtct gaggatgaag 2280 acgcgggcgc ggtgggtgga gcaggagggg ccggagtatt gggacctaca gacactgggc 2340 gccaaggccc aggcacagac tgaccgagtg aacctgcgga ccctgctccg ctactacaac 2400 cagagcgagg cgggtgagtg accccggccc ggggcgcaga tcacttactc cccgctccat 2460 gcctcacgga cggccctggt cccctgagtc tccgggtcca agatcgaccc cgaggctgcg 2520 ggacctgcag agatcctcga cccgggagag ccccaggcgc ctttacctgg tttcatcttc 2580 agttgaggcc aaaatctccg caggttgcta ggggccgggc cagggctcgg tgggcggggc 2640 tgaccgcggg aactgggcca gggtatcaca tcctccaggg aatgtttggc tgcgacctgg 2700 ggcccgacgg gcgtctcctc cgcgggtatg agcagtatgc ctacgacggc aaggattaca 2760 tcgccctgaa cgaggacctg cgctcctgga ccgccgcgga taccgcggct cagattaccc 2820 agcgcaagta tgaggcggcc aatgtggctg agcaaaggag agcctacctg gagggcacct 2880 gcatggagtg gctccgcaga cacctggaga acgggaagga gacgctgcag cgcgcgggta 2940 ccaggggcca tggggagcct gctcgatctc ctgtagatct cccgggctgg cctcgcacaa 3000 ggaggggaag aaaatggaaa caccaccaga atatcgccct ccctcctgtc ctgacggaga 3060 ggaatcctcc tgggtttcca gatcctgtat cagagattga ctctgagggc ccaccctgct 3120 cttcctggga caattaaggg atgaagtctc tgagggagtg gaggggaaga caatccctgg 3180 aagactgatc cgcggtcccc tttcacccca cagcaacctt gggcaccagg acttttcctc 3240 ccgggccttg ttctctgcct cacactcaat gtgtcggagt ctgactccag ctcctctgag 3300 tcccttggcc tccactcaga tcaggaccag aagtccctgc taccctgctc agagactaga 3360 actttccaag gaataggaga ttatcccagg cgcctgtgtc caggctggtg tctgggctct 3420 gtgctccctt ccccacccca ggtgtcctat tcatcaggat ggtcacatgg gcgctgctgg 3480 ggtgtcccat gaggaatgca aagtgcctga gttttccgac tcttcctttc agaccccccc 3540 caagacacac gtgacccacc cccctctctg aacatgaggc ataacgaggt cctgggttct 3600 gggcttctac cctgcggaga tcacattgac ctggcagcgg gatggggagg accagaccca 3660 ggacatggag ctcgtggaga ccaggcccac aggggatgga accttccaga agtgggcggt 3720 tgtggtagtg ccttctggag aggaacagag atacacatgc catgtgcagc acaaggggct 3780 gcccaagccc ctcatcctga gatggggtaa ggagagagat gggggcggcc atgtctctta 3840 gggaaagcag gagcccctct ggagaccttt agcagggtcg gggctgggtc ctggaggtca 3900 gaaccctcac attcccctcc tttcccagag ccctctcccc agcccaccat ccccattgtg 3960 ggtatcattg ctggcctggt tctccttgga gctgtggtca ctggagctgt ggtcactgct 4020 gtgatgtgga ggaagaagag ctcaggtggg gaaggggtga ggagtcgggt ttgagttttc 4080 ttgtcccact gggggtttca agctccaggt agaaatgtgt tctgcctggt taccgggaag 4140 caccatccac attcatgggc ctacccagcc tgggccctgt gtgccagcac ttactctttt 4200 gtaagcacct gtgacaatga aggacagatt tctcaccttg atgattgtag tgatggggat 4260 ctgaccccag taatcacagg tcaggggaag gtccctgctg aggacagacc ttaggagggc 4320 agttggtcca ggacccacat ctgctttcct tgtttttcct gatcctgccc ttggtttgca 4380 gtcacacatt tctggaaact tctcgaggtt ccaagactag gaggttcctc taggacctca 4440 tggccctgct accttcctgg cctctcacag gacgttttct tcccgcagat agaaaaggag 4500 ggagctactc tcaggctgca agtaagtatg aaggaggctg atccctgaga tccttgggat 4560 attgtggttg ggagcccatg ggggagctca cccaccccac aattcctcct ctagccacat 4620 ctcctgtggg atctgaccag gttctgtttt tgttctaccc caggcagcca aagtgcccag 4680 ggctctgatg tgtctctcac ggcttgtaaa ggtgagaccc tggggaggct gatgtgtgtg 4740 ggttgttggg gtaacagtgg atatagctgt gctatggggt ttctttgact tggatgtatt 4800 cagcacatga tgggctgttg aaggtgtgac ccctca 4836 //