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EBI Dbfetch

ID   AUXG01000522; SV 1; linear; genomic DNA; WGS; HUM; 4978 BP.
XX
AC   AUXG01000522;
XX
PR   Project:PRJNA213624;
XX
DT   01-AUG-2013 (Rel. 117, Created)
DT   01-AUG-2013 (Rel. 117, Last updated, Version 1)
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DE   Homo sapiens scaf01171_reg01_ctg02, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-4978
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   "Sequencing the RPCI-11 Genome";
RL   Unpublished.
XX
RN   [2]
RP   1-4978
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   ;
RL   Submitted (30-JUL-2013) to the INSDC.
RL   Roche, 16 Commercial St, Branford, CT 06405, USA
XX
DR   MD5; 4054e061dace99b96546bb1131f3cce2.
DR   ENA; AUXG010000000; SET.
DR   ENA; AUXG000000000; SET.
DR   ENA-CON; KI270736.
DR   ENA-CON; KE557410.
DR   BioSample; SAMN02258483.
XX
CC   This is a subset of the whole genome assembly of RPCI-11 containing
CC   novel regions that do not exist in the GRCh37.p11 reference
CC   assembly, GCA_000001405.12.
CC   ##Genome-Assembly-Data-START##
CC   Assembly Method       :: Newbler v. 06/07/2013
CC   Assembly Name         :: RP11_1.0_unmatched_regions
CC   Long Assembly Name    :: RP11_1.0 regions unmatched to GRCh37p11
CC   Genome Coverage       :: 39.0x
CC   Sequencing Technology :: 454; Illumina MiSeq
CC   ##Genome-Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..4978
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="RPCI-11"
FT                   /db_xref="taxon:9606"
XX
SQ   Sequence 4978 BP; 1040 A; 2003 C; 296 G; 1639 T; 0 other;
     ttgcattcca ttccgttcca ttgcattcca ttccgttcca ttgcattcca ttccattcca        60
     ttccattgca ttccattcaa ttccattcca ctctactcca ctccaatcca ctccagtcca       120
     ctcaactgca ctccttgcca ttcccttcca tcccattgca ttccactcca ttcctctcta       180
     ctccactcca aatcactcca ctccagtcca tgccgttcca ttccatccca ctccattcca       240
     ctccgttcca ctcgactcca ctgcaatcca ctccactcca ttccattcca ttccattcta       300
     ttccactcca ttttatgcca ttcgtttctt tcgacgggat ctcactgtgt caaaaaaggc       360
     tggaatacag tggcacaatc tcagctcaga tttcatttca ccattgcatt gcattccatt       420
     ccattccatt ccactccact ccattctact ccactccact ccagtccatt ccattccact       480
     ccactctatt ccactccact ccactccatt cctttccatc ccattccgtt tcactccact       540
     cctctccact ccactccgtt ccattccact ccgtcccatt ccattctact gcattccact       600
     ccattgcact ccattccact ccactccact ccacctcatt ccattccatt ccattccatt       660
     ccattccatt ccattccatt ccattccatt ccactccttt ccattccatt ccattctttt       720
     gacaggatct cactctgtca cccacgatgg gatgtattgg cactatctca gctcacattt       780
     aatttcacca ttccatttca ttccattgca ttccattgca ttccattcca ttgcattcca       840
     ttcctttcca ttaaatacca ctccattcca ttccattgca ttccattgca ttccattcca       900
     ttgcattcca ttcctttcca ttaaatacca ttccatccta tttcattcca ctccagtgaa       960
     ctccactcca ctgcattcca ttccattcca ttccactcca ctccaatcca ctccacacca      1020
     ttccattcta tctcattcca ttccaatgta ctccactgta ctccactcca ctccactcca      1080
     tccattccat tccattccat tctattccat tccattccac tcctttccat tcaattcctt      1140
     tctttcaaca ggatttcact ctgtcaccca ggctggagtg cagtggcaca atctcagctg      1200
     atatttcatt tctccactcc attctattcc attccattcc attcaattcc attccactac      1260
     cttccattcc tctccactcc actccacttc aatccattag attccattgc atgccattcc      1320
     actccactct acgccactcc tctccaagtc actccactcc aatccattca attccatcca      1380
     attccatacc actccactcc actccccacc actccactcc cctccccacc actccactcc      1440
     cctccattta tttccaatcg attccattcc acgccattcc attccacttc actcctctcc      1500
     actccgctac actacattcc attccattcc tttccactcc attccattcc actccactcc      1560
     actctacttc actccatttc accccactcc actgcattcc attccattcc aatccattcc      1620
     attccattcc attccagtcc acttcactcc agttcagtcc aatccactcc actccactct      1680
     attccattcc atcccattcc attccactat tctccactcc actccactgt actccactcc      1740
     actccactcc attcccttcc attccattcc tctccttccc attccatttt cgtttgacag      1800
     gatttcactc tgtcacccac ggtggagtgc agtggcacaa tttcagctca tatttcattt      1860
     catcattcca ttctattcca ttccattcct ttccattcca ctcaattcca ttgcactaca      1920
     ttccattcca ctccactcca ctacactcga ctccattcca ttccattcca ctccactcta      1980
     ctccaatcct ctccacgcca ctccactcca ctccatttaa ttccatccaa ttccatacca      2040
     ctgaactctt ctccccacca ttccactccc cttcctccac ttcattccat tcgattcatc      2100
     cccttccatt ccactccact cctctctact ccgctacagt ccattccatt ccatttcttt      2160
     ccagttcatt tccttccact ccattccatt ccattccatt ccaatactat cccttccatt      2220
     ccttacattt gacaggatat cactctgtca ctcagtctgg agtgcagtgg taaaatctca      2280
     gcttacattt cgtttcacta ttcctttcca ttccattccg ttccattcca ctccactcca      2340
     ctccagtgca ctcaaatcca ctccatttca ttccattcca tttccctcca ttccactcca      2400
     gtccactcca ttccactcca ctacactcca ttccattcca tcccattcca ttccactcca      2460
     ttccactcca gtcccctcaa ctccactgca ctccattccg ttccactcca tgatattcca      2520
     ttccactcct ttccactcca cagcactcca ctccactctg ctatactcca ctgaattcca      2580
     ttccattcct ttcttttgac agcatctcac tctgtcaccc aggctggcat gcagtggcac      2640
     aaactaggct cacatttcat ttcaccattc cattccattc tattccattg tattccatcc      2700
     ctttgcattc cattccattc cgttcctttc cattctattt atttccattc cattccattc      2760
     cactccactg cattccactc tactccactc caatccactc cactccactg cactccatga      2820
     tattccattc catcccattc cattccactc ggttccactc tactccactc caatccactc      2880
     cactccactg cactccattg cattccattc catccctttc cattccactc cattccactc      2940
     gactccactg cactcaacac cactccactc cactccactc cattctattc cattatactc      3000
     cattccattc cattactttc tttccatagg atttccctca gtcacaaagc ctggaatgca      3060
     gtggcacaat ctcagctcac atttcttttc accattccat tgctttccat tcccttccac      3120
     tttatttcac tccactccac tccactttac tccattccat tccactcctt cccattccat      3180
     ttgactccat tccactccac tccactccat tttcctccac tccattccat tccattccat      3240
     tacctttcac tccattgcat ttcatccctt tctttcgaaa gtatatcact gtgtcacaca      3300
     ggctggagtg cagtggcaca atctcagcgc acattacatg tcaactttcc tttgcattgc      3360
     attctattgc attgcattcc attgcattcc attccaatcc actccactcc actccactac      3420
     attccattac atccgattcc attccactcc attcctctcc tttccactcc actgcactcc      3480
     actccactcc atttcactcc atcccattcc attccgctcc attccactgc actccacttc      3540
     acccctctcc actccactgc actccagtcc actccattcc attccattct gctgcattcc      3600
     attccactgc attccattcc attccattct tttgagagta tctcactctt tcacccacct      3660
     ggaacacagt ggcacaatct cagctcacat ttcatttcac cattccattc cattcttttc      3720
     cattccaatc cattgcattc cattccactc cacttcactc cactccaatc caatacattc      3780
     cactccactg caatcgactc cattccagtc cactccactc ctttccatgc catcccattc      3840
     cattccactc ctttccactc cactccattc cacttcattc cattaaatta cattgcattc      3900
     cattctaaat ccattccttt ccattccttt ctttcgacag gaactcactc tgtcacccat      3960
     gctggagtgc agtgcacaat ctcagctcac atttcatttt accattccat ttcattccat      4020
     gccattccat tccactgcac tccaatccac tccattccat tccaatccac tccgctccaa      4080
     tccattccat tccattccaa tcccttccgt tccactcctt tctttcgacc gatctccctc      4140
     tgtcacacag gctgtagcgc agtggcacaa tctcaacaca tatttctttt gaccattcca      4200
     ttccattcca ttccattcca ttccattcca ttccactcca ctcctctcca ttcctttcca      4260
     ctccactcca ctccactcca ctccactcca ctccattcca ctctacccta ctccactcca      4320
     ctccatttca ttccatccca ttccattcca ctcctttcca ctccactcca ctctattcca      4380
     ttccattgca ctccattcca ttccaatatt ttctttcgac aggatctcac tctgtcaccc      4440
     aggctgtagt gcagtgaaac aatctcagat catatttcat ttcccctttc catttctttc      4500
     cattccattc cattccatgc cattccactc cactccactc cactccactc cactccattc      4560
     tattccattc cattccactc cattccattc caatattttc tttcgacagg atctcactct      4620
     gtcacccagg atggagtaca atggcaaaat ctcagctcac atttcatttc accattccat      4680
     tccattgcat tccactccac tccactccac tccactcctc tccactcctc tccactccac      4740
     tctgcttcac gccactccag tcattccatt ctactccatt ccattccatt cctttatttc      4800
     gaatggatct cactctgtca cacagactgg aatgcggtgg tggcacaatc ttagctcaca      4860
     tttaatttct ccattccatt ccaatccatt ccataccatt ccattccatt ccactccact      4920
     ccactccatt ccattccact ccactccact ccatttcatt ccattccatt ccattcca        4978
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