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EBI Dbfetch

ID   AUXG01000521; SV 1; linear; genomic DNA; WGS; HUM; 2660 BP.
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AC   AUXG01000521;
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PR   Project:PRJNA213624;
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DT   01-AUG-2013 (Rel. 117, Created)
DT   01-AUG-2013 (Rel. 117, Last updated, Version 1)
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DE   Homo sapiens scaf01171_reg01_ctg01, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-2660
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   "Sequencing the RPCI-11 Genome";
RL   Unpublished.
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RN   [2]
RP   1-2660
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   ;
RL   Submitted (30-JUL-2013) to the INSDC.
RL   Roche, 16 Commercial St, Branford, CT 06405, USA
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DR   MD5; de82406179e2c1f7db80ee6e2d9a284e.
DR   ENA; AUXG010000000; SET.
DR   ENA; AUXG000000000; SET.
DR   ENA-CON; KI270736.
DR   ENA-CON; KE557410.
DR   BioSample; SAMN02258483.
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CC   This is a subset of the whole genome assembly of RPCI-11 containing
CC   novel regions that do not exist in the GRCh37.p11 reference
CC   assembly, GCA_000001405.12.
CC   ##Genome-Assembly-Data-START##
CC   Assembly Method       :: Newbler v. 06/07/2013
CC   Assembly Name         :: RP11_1.0_unmatched_regions
CC   Long Assembly Name    :: RP11_1.0 regions unmatched to GRCh37p11
CC   Genome Coverage       :: 39.0x
CC   Sequencing Technology :: 454; Illumina MiSeq
CC   ##Genome-Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..2660
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="RPCI-11"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 2660 BP; 568 A; 1045 C; 136 G; 911 T; 0 other;
     gattccattc cattccattc aatttcattc cattgctttc cataccattc cactccattc        60
     cacttcactc caataaactc cactccactc ctttccattc cttcccattc tatttcattc       120
     cattcctctc cgcaccactc cagtccactc cattccattc caatccatcc cattcaattc       180
     ccctccattc cactccattc cacaccactt cactacactc cattggattc cattccattg       240
     aatttcactt cattccattc cattcctttc tttcgacagg atctcactgt gtcacactgg       300
     ctggagtgga gtgcagtgcc actatctcag gtcacattta atttcaccat ccattccttt       360
     gtattccatt gcgttccttt ccatttcatt ccattgcatt ccattccatt tcattccatt       420
     gcattccatt ccatttcatt ccattgcatt ccattccatt tcattccatt gcattccatt       480
     ccatttcatt ccattgcatt ccattccttt gcattccatt gcattccatt ccattgcatt       540
     ccattcaatt ccattccatc ccattccgtt ccattccact tctgtgaact ccactccact       600
     ccactccact caattccatt ccatcccatt cctttccact ccattccact atactccact       660
     ccattccact ccactctatt ccattccatt cctccacact ccagtccact caactcccct       720
     ccactccact cctcaccatt ccattccatt ccatcccttt ccattccact caattccact       780
     ccactccact caactaaact ccactccact ccattccatt ccactccatc actttctatt       840
     ctactttatt ccactccact ccactccact gccttccatt ccattccatt ccattccttt       900
     cttttgagag gatctcatac tgtcacccag gctggagttc ggtggcacaa tatcacatca       960
     catttcattt caccattgca tttaatttca ttctattcca ttccattcca ctccactcca      1020
     ttccactcca ctccactcca tttcattcca ttctactcaa ctcctctcca ctcaatccca      1080
     ttcgtttcca ccccactcca ctccactcca ttccactcca ttccattgca ttccattcat      1140
     tcccttccat tccatttccc tccattccat tatattccac tccactccac tcccctccac      1200
     tccattttat tccattctac tccattccat tccattcctt tatttcaaat ggatctcaca      1260
     ctgtcacaca gactggagtg cagtggcaaa atcttagctc acatttcatt tctccattcc      1320
     attccattcc attccactcc actccattcc actccactcc actccattcc attccattaa      1380
     actccattac attccactcc actccacgcc accccattac actccactcc actctactcc      1440
     attccactcc actccattcc gttacaatcc attccactcc attccacttc attccactgc      1500
     actcttctcc actgcacttc attccactcc actgcattcc attccgctcc actccactcc      1560
     actacattcc actccactcg tctccagtcc actccactcc attccattct accacattcc      1620
     attccattcc tttatttcga ttggatctca ctctgtcacc cagactggag agcagtggca      1680
     caatcttagc tcacatttta tttcaccatt ccattccatt ccattctatt ctactctatc      1740
     ccattccatt gcactccatt ccatgccaac acattccatt cccttccttt cctttgaaag      1800
     gatctcactg tgtcaaaaaa ggctgtaata cagtggcacc atctcagctc acattacttt      1860
     caccactcca ttgcatttca ttccatttca tttcattcca ttccactcca ctccattcca      1920
     ctacactcca ctccattcca ctacactcca gtccactccc ctctattcca tttcattcca      1980
     ttccattcct ttccattcca ttccattcct ttcaattcca ttccatacca ttccactcca      2040
     ttccactcca ctccaataaa ctccactcca ctgcactcta ctactttcca ttccatccca      2100
     ttccatttca ctccattcct ctccactcca ctcctgtcca ctccatttca ctacaatcca      2160
     ttcgattcca tttcattcca tttcactcca ttcaattcca ttcctttctt tccacaggat      2220
     ctcactgtgt caccctggct ggagttcagt ggcacgatct cagttcacat ttaatttcac      2280
     catccattcc tttgcattcc attgcattcc attccatttc attccattac attcctttcc      2340
     atttcattcc attgcattcc attcctttgc attccattgc attccattcc attgcattcc      2400
     attcaattcc attccatccc attccattcc acttctgtga actccattcc actaaactcc      2460
     acggcattcc attccattcc actccactcc actcaattcc attccatccc actccattcc      2520
     actccattct actatactcc aatccactct actaaactcc attccattcc actccttccc      2580
     actccactct gctgaactcc cctccactcc actcctcacc actccattcc attccatccc      2640
     tttccattct actcaattca                                                  2660
//


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