Dbfetch

ID   AUXG01000516; SV 1; linear; genomic DNA; WGS; HUM; 5518 BP.
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AC   AUXG01000516;
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PR   Project:PRJNA213624;
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DT   01-AUG-2013 (Rel. 117, Created)
DT   01-AUG-2013 (Rel. 117, Last updated, Version 1)
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DE   Homo sapiens scaf01162_reg01_ctg03, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-5518
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   "Sequencing the RPCI-11 Genome";
RL   Unpublished.
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RN   [2]
RP   1-5518
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   ;
RL   Submitted (30-JUL-2013) to the INSDC.
RL   Roche, 16 Commercial St, Branford, CT 06405, USA
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DR   MD5; f77b272221d10a1dfb570d801e18a52a.
DR   ENA; AUXG010000000; SET.
DR   ENA; AUXG000000000; SET.
DR   ENA-CON; KI270741.
DR   ENA-CON; KE557409.
DR   BioSample; SAMN02258483.
DR   Ensembl-Scaffolds; AUXG01000516.1:1-5518; homo_sapiens.
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CC   This is a subset of the whole genome assembly of RPCI-11 containing
CC   novel regions that do not exist in the GRCh37.p11 reference
CC   assembly, GCA_000001405.12.
CC   ##Genome-Assembly-Data-START##
CC   Assembly Method       :: Newbler v. 06/07/2013
CC   Assembly Name         :: RP11_1.0_unmatched_regions
CC   Long Assembly Name    :: RP11_1.0 regions unmatched to GRCh37p11
CC   Genome Coverage       :: 39.0x
CC   Sequencing Technology :: 454; Illumina MiSeq
CC   ##Genome-Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..5518
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="RPCI-11"
FT                   /db_xref="taxon:9606"
XX
SQ   Sequence 5518 BP; 1693 A; 1126 C; 1348 G; 1351 T; 0 other;
     cctatgtgcg ggacaaactt tcagaccctc gtagcagggt tctggaatcc tatgtgaggg        60
     ccaaatatta gacccacatg gcagtgttct ggattcgtac gtgagggaca tatactcaga       120
     accaacagca gtgtcctgga atcctaagtg ggggacaaac attcagacca cagcaggatt       180
     gttctgaaat cctatgtgag gaacaaacat tgagaccaca gcaggagtgt tctggaatcc       240
     tatatgaggg acaaaccttc agaagacagc aggattgttc tgaaatccta tgtgaggagc       300
     aaacatttag actacaaaag gagtgttcca gaatcctatg tgagggacaa atatttagac       360
     cctcgtagca gtgttccgga atcctatgtg agggacaaat atttagaccc tcgtagcagt       420
     attctggaat cctatgtgat ggacaaacat ttagacccac gtagcagtgt tctggaatca       480
     taagtgaggg acaaaccttc agaccacagc atgagtgttg tggaatccta tgtgagggac       540
     aaatattcag acgacagcag aagtgtcctg aagtcctata cgaggaacaa acctttgtac       600
     cacagccgga gggttctgga atcctaagtg aaggacaaac attcggagga cagcaggcat       660
     gttctgaaat cctatgtgag gagcaaacat ttagaacaca acaggactgt tctggaattc       720
     tatgtgcagg acaaacattc agaccctgat aacagtgata tggattccta tgtgaggcat       780
     aaacttttag acccaggtgg aagttttctg gaacgtgagg ggcaaacact cagaacccaa       840
     cagcagtgtt ctggaatcgt atgtgaggga ctaatattca gtccacagcg ggaatgttct       900
     aaaatcctat gtgacgaaca cacattcaga ccacagcagg agtgttctgg aatcctatgt       960
     gagagacaaa cattcagatc ctggtagcag tgaaatggat ccctatgtga agtacaaact      1020
     tttagaccga cgtgagagtg ttctgtaatc ttacgtgagg gacaaacact cagaatccaa      1080
     aagcagtgtt ctggaatcct atgtgaggga caatcattca gaccacagct ggggtgttct      1140
     agaatcctac ttgtgggaca aacattcaga ccctggcaac attgttctgg aatcctatgt      1200
     gagggataaa catttagaaa acagcaggag tgttctggag tcctatgcgt gggacaaaca      1260
     ttcagactct tgtagcggtg ttctggaatc ctatgtgagg gacaaacatt gagaccctct      1320
     tacaagtgtt ctggaatcct atgtgaggta caattattca gaacctcgta gcagtgttct      1380
     ggaatccaat gtgagggaga aacactcaga acccaccagc agtgttctgg aatcctatgt      1440
     gaggaacaat cattcagacc aatgctgggg tgttctgaaa tcctaagtgt gggacaaaca      1500
     ttcagaccct cgtagcattg ttctggaatc ctatgtgagg gacaaacatt cagatgacag      1560
     caggagtgtt ctgaaatagt atgtgaggaa caaacattta gaccacagca ggagtgttca      1620
     ggaatcctac atgagggaca aacactcaga caatagcagg agtgttctgg aatcctatgt      1680
     gaggtttaga aattcatacc ctcatagcag tgttctggaa tcttatctga gggagaaaca      1740
     ctcagaaccc agcagcagtg ttctggaaac gtatgtcagg gacagtcatt cagaccacag      1800
     ctggggtgtt ctggaatcct acgtgtggga caaatattca gaccctcgta gcaatgttct      1860
     ggcatcctat gtgagggaaa agccttcaga cccacgtaac agtgttctgg aatcgtaagt      1920
     gagggagaaa cactcagaac ccaacagcag tcttctggaa tcttaagtga gggacataca      1980
     ttcagtccac agcagaagtg ctgtggaatc ctatgtgagg gacaaacatt cagacgacca      2040
     caggagtgat ctgcaataat atgtgaggaa caaacattta gaccagagca cgaatgttct      2100
     ggaatcctaa ctgagggaca catattcagt caacagcaga agtgttctgg aatcttatgt      2160
     gacggacaca cattcagacc acagcaggag tgttctgcaa tcctttgtga gggacaaaca      2220
     tttagaccca catagcagtg ttctggattc gtacgtgtgg gacaaacact cacatcccaa      2280
     cagtagtgtt atggaatcct aagtgagaga cgaacattca gaccaaagca ggagtcttct      2340
     ggaatcctat gtgaggtaca atcattcaga cattcatagc agagttctgg aatcctatct      2400
     gagggagaaa cattcagacc agagcaggag ttttctggaa tcctatgtga gggacaatca      2460
     ttcataacac agctggggtg ttctgtaatc ctacgtgttg gacaaacatt cagaccctcg      2520
     tagcattgtt ctggaatcct acgtgaggga caaatattca gaccagagta ggagtgttct      2580
     ggaatcctat gtgagggaca atcattccga ccatacctgg ggagttctgg aatactacgt      2640
     gaggtacaat cattcagaca cttgtagcag tgttctggaa tcctatgtga gggagaaaaa      2700
     cacagaaccc agcagaaata ttctgagatc ctatgtgagg gagaaacatt cggacctcac      2760
     caggagtgtt ctggaatcat atataacaga gaataattca gaaactcgta gcagggttct      2820
     ggaatcatat gtgatggaca aacattgaga acctcttagc agtgttctgg aatcctatgt      2880
     gagggagaaa cacacagaac ccagcagaaa tgttctggaa tcctatgtga gggagaaaca      2940
     ttcagacctc agcaggagag ttctggaatc ctatgtaaca gagaataatt cagaaactcg      3000
     tagcagtgtt ctggaatcct atatgaggga taaacattta gacccacgta gcagtgttct      3060
     agaatcttaa gtgaggacaa acactcagaa ctcagcagca gtgttctgga atactatcta      3120
     agggagaaac attcagacca gagtaggagt gttctggaat cttacgtgag gtacaatcat      3180
     tcagaccttt gtaccagtgt tctggaatgc tatgtgaggg agaaacactc agaaacaagt      3240
     agcagtgttc tggaatccta agtgagggac aaacattcag accacagcag gagtgttctg      3300
     gaatcctatg tgatggagaa taatttagaa cctcgtagca gtgttctgga aacctatgtg      3360
     atggacaaac tttcagaccc tcacagcagt gttctggaat cctatgtgag ggacaaacct      3420
     ttagacacat gtagcagtgc tctggaatcc tatatgaggg tcaaacactc agaacacatc      3480
     agcagtgttc tggaatccta tctgtggaat cctatgtgag ggactaacac gcagactctc      3540
     gtatcagtgt tccggaatct tatgtgaggg acaaacattc agacccccgt agtatggttc      3600
     tgaaatccta agtgagggac aaacattcag accatagcag cagtgttctg gtatcctaca      3660
     tgaagaataa acatttagac ccacttagca gtgttctgga attgtatgtt agggacaaac      3720
     actcagaacc cagcagcagt gttctgcaat cctatctgag ggagaaactt tcggaccaga      3780
     gcaggagtgt tcggggatcc tctgtgaggt acaatcattc agatttttgt agcagtgttc      3840
     tggaatccta tgtgagggag aaacactcag aaatcagcag cagtgttctg gaatcctttg      3900
     tgagggacaa acattcagac aacagcagca gtgttctgta atactatgtg agggaaaaac      3960
     atttagaccc acgtactagt gttctgcaat tgtacgtgag ggacaaaccc tcagaaccca      4020
     accgtagtgt tctggaattc taagtgagga acaaacattc agaccacagc aggagtgttc      4080
     tggaatccta tgtgatggag aataattcag aacctcgtag cagtattctg gaatcctatg      4140
     tgatggacaa cattcagacc ctcgtagcag ttttctggaa tcctgtatga gggacaaaca      4200
     tttagaccca cgtagctgtg ttctggaatc ataagtgagg gtcaaacact cagaacccag      4260
     cagcactgtc ctggaattct atctgtggga gaaccattca gacaagagca ggaatattct      4320
     ggaatgctat gtgagggaca gtcattcaga cacagctggg gtgctctgga atcctacgtg      4380
     tgggacaaac attcagaacc ttgtaacatt gttctggaat ccaaagtgag ggacaaacat      4440
     tcagaccaca gcaggagtgt tcttttatcc tacgtgaggg acagagatta ataccctctt      4500
     agcagtgttc tgtaatccta tatgaggtac aaactttcag acaacaacag cagtattctg      4560
     gaatcctacg tgaggaacaa acattcagac cacaggagga gtgttctgga atcctatgtg      4620
     aggggcattc agaccacagc agtagttttc tggaatccta tgtgggggac taacattcgg      4680
     accatcgtag cagtgttcta taatcttatg tgagggacaa acattcagac cctcgtagca      4740
     gtgtactgga atcgttcgtg agagacaaac actcataacc caacagcagt gttctgggat      4800
     cctaagtaag ggacaaatat tcagaccata gcaagagtgt tctggaatcc tacgtgatgg      4860
     agaataattc agaacctcgt aggagtgttc tcgtatccta tgtaatgggc aaagtttcag      4920
     accctcgtac ccgtgttctg gaatcctaag taatggacaa acatttagac ccacgtagca      4980
     gtgttctgga atcgtcggtg agggaccaac tctcagaacc catcagcagt gttctggaat      5040
     cctatctgaa ggagaaacat tcagactaca gcaggagtgt tctggaatcc tatgtgagct      5100
     acaatcattc agacattcgt agcaatgttg tggaatccta tgtgagggag aaacattcag      5160
     accacagcag gagttttctg gaatcctatg agagggacaa tcattcagtc cacagctgag      5220
     gtgttctgga atcctacgtg ttggacaaac attcagatca cagccggagt gttctggaat      5280
     actatgtgag ggacattcag accacagcag gagtcttctg gaatcctatg tgagggacaa      5340
     ctttcagacc acagcagcag tgttctggaa tcctttctga gggacaaact ttcagaccct      5400
     cttagcagtg ttctggaatc ctataagaag gacaaatctt tagacctacg tagcagtgtt      5460
     ctggaatcgt acgtgaggga caaacactca gaaaccagca gcaattttct ggaatccg        5518
//