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EBI Dbfetch

ID   AUXG01000427; SV 1; linear; genomic DNA; WGS; HUM; 7092 BP.
XX
AC   AUXG01000427;
XX
PR   Project:PRJNA213624;
XX
DT   01-AUG-2013 (Rel. 117, Created)
DT   01-AUG-2013 (Rel. 117, Last updated, Version 1)
XX
DE   Homo sapiens scaf00977_reg01_ctg20, whole genome shotgun sequence.
XX
KW   WGS.
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-7092
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   "Sequencing the RPCI-11 Genome";
RL   Unpublished.
XX
RN   [2]
RP   1-7092
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   ;
RL   Submitted (30-JUL-2013) to the INSDC.
RL   Roche, 16 Commercial St, Branford, CT 06405, USA
XX
DR   MD5; 001e37af0e7a9dafd27a459ffe56f968.
DR   ENA; AUXG010000000; SET.
DR   ENA; AUXG000000000; SET.
DR   ENA-CON; KE557396.
DR   ENA-CON; GL000185.
DR   BioSample; SAMN02258483.
XX
CC   This is a subset of the whole genome assembly of RPCI-11 containing
CC   novel regions that do not exist in the GRCh37.p11 reference
CC   assembly, GCA_000001405.12.
CC   ##Genome-Assembly-Data-START##
CC   Assembly Method       :: Newbler v. 06/07/2013
CC   Assembly Name         :: RP11_1.0_unmatched_regions
CC   Long Assembly Name    :: RP11_1.0 regions unmatched to GRCh37p11
CC   Genome Coverage       :: 39.0x
CC   Sequencing Technology :: 454; Illumina MiSeq
CC   ##Genome-Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..7092
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="RPCI-11"
FT                   /db_xref="taxon:9606"
XX
SQ   Sequence 7092 BP; 1518 A; 2820 C; 420 G; 2334 T; 0 other;
     ctccactcca ctccattcca ttccattcca ctccattcca ttactttctt tccacaggat        60
     ctcactctgt cataaaagct gtattgcagt ggcacaatat cagctcacgt ttcttttcac       120
     cattcctttc cattccattc catcccttta cattccactc tatttcactc cactccactc       180
     gactccattc cattccactt catcacattc cattcgactg cattacactt cactccactg       240
     cactccactc cactccattc cattccattt caatccattg cattccattg ctttctttca       300
     acagaatatc actctgtcac tcaggaagga gtgcagtggc acaatcgtag ctcacattac       360
     atttcaactt tccatttcat tgctttctat tccattgcat tccattccgt tccattccac       420
     tccattccat ttcattcaat tccattcctt tcccctccgt tccactccac tccaatccac       480
     tggaccactt ccgattacat ctttttccat tacactcaat tccactcctc tccactccac       540
     tgctctccac tccactccat tccactccat tccattccat tcctctccat tccactacac       600
     tccactctac cccactccac tccatctcat tccattccat ccaataacat tcctctccat       660
     tccactccac tccacttcac ttcactccac tccactccag tccactctgt tccattccat       720
     tgtattcctt tccattcctt tctactgcat tccattctat tactttcttt cgagagtgtc       780
     tcactctttc aaccaacctg gatggcagta acacaatctc aactcacatt tcgttgcacc       840
     attccatcca gtcgattcca ttccattcca tttcactcca ctccactccg ctccactcca       900
     aataattcca ctccactcca ctccactcca ttccagtcaa ctccactcct ttccattcca       960
     tcccattaca ttccactcct ttccactcaa ctccactcca tccaatccat tccattccat      1020
     tccactccat tccattccat tccactccat tccattccat tcctttcttt tgacaggatc      1080
     tccctctgtc acccaggctg ttgtacagtg gaacaatctc agctcacatt tcatttcacc      1140
     attccattcc atgctattac acggcactcc actccactca attccactca accccactac      1200
     aatccattcc attccactcc attccaatcc cttccattcc actcctttct ttcgacagta      1260
     tctccctctg tcacacaggc tgtagcatag tggcactatc ttagcacaca tttcttttca      1320
     ccattccatt ccattcaatt ccgttctgtt ccattccgtc cctttctgtt ccactctttt      1380
     ccactacact ggactccact cctttgcact ccactccatg ccactgcact ccactccatg      1440
     ccactgcact ccactgcatt catttccact gctttccact ccaatccact ccattacact      1500
     ccactccatt ccactccact accctccatt ccactccatt ccattccact ccactctgct      1560
     ccacttcagt ccactccact cctctccact gcattccatt ccactccact ccactccact      1620
     ccattccact caactctatt ccactcaact ccactccact ctactccatt gcattccact      1680
     ccattccatt ccattctttc ctttccacag gatctcactc tgtcacaaat gctggaatgt      1740
     ggtggcacaa tctcagctca aatttctttt cactcttcta ttacattcct ttccatccca      1800
     ttccattcca ctctatttca ctccattcca ctcccctcca ctccactcta ctcctctcca      1860
     ttccattgca ctccattcga ttccattcca tctcactcag ttgcattcca ttcctttctt      1920
     tcaaaaggct atcactgcgt cacccaggct ggaatgcagt ggcacaatct cagctcacat      1980
     tacatgtcaa cttcccattg tattgtattc tattccattt tattccactg cattccattc      2040
     cattccattc cactccactc cattctactc cactccactc cagtacattc cattacatcc      2100
     aattccgttc cactcctcta cactccactg cactccactc cactccattc cattccatcc      2160
     cattccattc tgctccattc aactacactc cactccaccc cactccactc ctcttcattc      2220
     cattccattc agtcccattc cattcctctc cattccactc cactccactt caccccactc      2280
     cactcctctc cagtccattc cattccattc cattccacag cattccattc cattcctttc      2340
     ttttgagttt ctaactctgt caaccatcct ggagcactgt tgcacaatct cagctcacat      2400
     ttcatttcac cattccattc cattccattc cattccattc cattccattc cattccattc      2460
     cattccgttc cgttccgttc cactctgttc caatccactc ccctccactc cactacattc      2520
     cattacacac gattccattc cactccattc cactcctttt cactccactg cactccactc      2580
     cactccattc ccttcgatcc cattcaattc cactccattc cactgcactc ccttccaccc      2640
     cactccactc cacttcaatc caatccattt caacccattc cattcctctc catttcactc      2700
     cacttcactt catgaattcc actgcactta tgtacactcc attccattcc attccactgc      2760
     attccattct attccttttc ctcgatttta tctcactctg tcacccagac tggagtgcag      2820
     tggcacaatc tcacgtccca tttcatttca caattccatt ccattgcatt gcattccatt      2880
     ccattccatt ttactccaat acactccaat ccactccact ccactccatt ccactgcatt      2940
     ccagtccact ccatttcttt ccattccatc tcattccaat ccaatccttt ccactccact      3000
     ccactccatt ccactccatt ccattcgatt acactccatt ccattccatt cttttgacag      3060
     gatctcactc tgtcacccag gctggtgtgc agtggcagaa tctctgctca catttctttt      3120
     cactattcca ttccattcca ctccattcca ttccacggca cttcagtcca ctataatcaa      3180
     ttttctccac tccactccag tccaaaccat tccattccat ttcaatccat tccaatccat      3240
     tccgctccat ctccgcccac tccactccac tccactccat tcaactaagc tcctctccac      3300
     ttccacagca caatctccaa tctcagctct catttcattt cactattcca ttccattcca      3360
     ttccatggca tttcactcca ctataatcag ttttactcca ctccactcca aaacattcca      3420
     ttccaatcca ttccattcca ctccactcca ctccattcaa ctatgctcct ctccattcca      3480
     cggcacttca ctccactata atcaatttta ctccactcca ctccaaacca ttccactcca      3540
     ctccactcca cttcattcgt ctccactcca ctccactcca tttcactcta ttcccctcca      3600
     ctccactgct ctccactcca ttccattcct ttctttccac agtatcccat tctatcaaaa      3660
     aggctggagt tcagtggtac aatctcagct cacatttatt ttcaccattc aatttctttc      3720
     cattccatcc cattccattc cactctattt cactccactc cactaaactc cattccattc      3780
     ctctccatcc ctttccattc gactccactc cactccattc cactcaattc cattaccttc      3840
     aattcgaatt cacaccattg cattccattg ctttctttcg acgggatatc acggtgtcac      3900
     ccaggcttgt gtgcagtggt acaatctcag ctcacaatac atgtcagctt tccattgtat      3960
     tgcattctat tccattgcat tccattccat tccattccat tccattccat tccattccat      4020
     tccattccat tcctgtgcat tccattcctg tgcattccat tccattcctt ctcattcagt      4080
     tccattcctt tccactctgt tccactccac tccactccac tacattccat tacatgcaat      4140
     ttcattccac tccattccac tcctctccac tccaaagcac tccactccac tctattccac      4200
     tacatccatt ccattccact ccattccact gcaatctact ccaccccact ccactccact      4260
     tcattccatt tcatcccctt ccattgaatt ccctttcgtt ccactgcttt ctttcgacag      4320
     gatctctctg tcacacaggc tgtagcatag tgccacgatc tcaacacaca tttcttttca      4380
     ccattccatt ccattccatt ccatgccatt ccattaaatt ccactccact acactcaact      4440
     ccactacact ccactccact cctctccact caataccttt cccctccatt caactctact      4500
     cattccactc caatccactc cattccattc cactccactc catgccactc cactccactc      4560
     aactacactc cattgcattc cactccactc aactccattc cactccactc aactccattt      4620
     cactgcactc cattgctatc cactccactc cactccaatc tactccattc cattccactc      4680
     tgctccattc cactccattc caatccattc cactccactc cattccaatc cattccattc      4740
     cattccactc cactccattc cactccattc cattctgctc cactcacctc cactaaactc      4800
     ctctccattc cattccactc gattccattc cattcctttc tttccagagg atctctctct      4860
     gtcacaatgg ctcgagtgca gtggcacaat ctcagctcac atttattttc accattccat      4920
     tgcattccat tccatcccat tccattacac tccactccac tccattccat tccattctat      4980
     tacattccat ttcactacat tgaatttctt ttctttcttt caacgtgata taactgtgtc      5040
     acccaggctg ctgtgcggtg gcacaatctc cactcacatt acatgtcaac tttccattac      5100
     attgcattct ttccattgca ttccattgca ttcctttcca ttccattcca ctctgttcca      5160
     ctccactcaa ctccactcca ctgctttcca ttatatatga ttgcattaca ctctactcca      5220
     ctcctctcta ctccactgca cttcactcca atccattaat tccaacccaa tcccttcctc      5280
     tgcagtctcc tcactccact ccacttaatt cctttccatt ccatcctatt ccattctgct      5340
     caattccact ccactccaca tcactccact ccactccatt ccaatccact ccattccatc      5400
     caactacatt ccaatccatt cctttctttc gagagtatct cactctgtca cacagcctgg      5460
     agcgcaatgg cacaatctca gctcacattt catttcacca ttccattcta ttcaaatcga      5520
     tttcattcca ttccattccg ctccactcca ctccactcca ttccaatcca ttccattcaa      5580
     ctccactcca ttccattcca gtccactcct ctcctttcta ttccatccca ttccattcca      5640
     ctcctttcca ctccactcca ctccagtcca ttgcattcca ttccactcca ttccattcca      5700
     tgactttctt ttgacaggat ctcactctgt aacccaggct ggtgtgcagt ggcacaatct      5760
     cagctcacat ttcatttcac cattccattg cacttcattc cataccactg aaatccactg      5820
     caatccgcca atttcactcc actccactcc aatccattcc attccattat actctaatcc      5880
     cttctattac attcccctct tttgacaggg tctccctctg tcacacaggc tgtagcgtat      5940
     tcgccaaatc tcagtaaata tttcttttca gcattgcatt ccagtctttt cttttgcatt      6000
     ctgttccatt ccattccatt ccgttccaca acacttcact gcactccact cctttccttt      6060
     ccactccacg ccatcccact gaactccact ccactccact tcactccact ccattccatt      6120
     ccaatccatt ccaatccact ccacaccact tcattccact ccactcaact ccactcaatt      6180
     ccactccact gcattctgct ccattccact ccactccatt ccactccact ccagtctact      6240
     tcattccact ccactccact ccattccact ccgttccact ccattccatt ccatttcttt      6300
     ctttttgtag gatctcactc tgtcgcaaag cctgcagtgt agttgcacaa attcagctca      6360
     tatttctttt gaccattcca ttgcattcca ttccatccca ttccattaca ctctatttca      6420
     ctctactcga ctccactcca ctccactcca ttccattcca ctccatccca ttcctttaga      6480
     ctccattcca ctccactcca ttccactctt ctccagtaca ctccaatccc ctctattaaa      6540
     ttccatttca gtccatttca atccattgat tccattcctt tcttttgaca agatatcact      6600
     gtgtcaccca ggctggagtg cagtggcaca atctcagctc acattacatg tcaactttcc      6660
     attgcattgc attctattca attgcattcc atggcattcc attcgattcc attccattct      6720
     gtttcattcc tttctgttcc attccattct gttccattcc attccattag attccactcc      6780
     attccactcc atcccactcc actccacttc attccattcc attccaacca attccattct      6840
     tcttcattcc actccactcc actccattcc actatattcc tttccactcc actccattcc      6900
     actccactcc tttccactcc actacactcc actccattcc actccattcc actccactct      6960
     tctccattcc actccactcc attcacctcc actccactcc attccactcc actcaaatcc      7020
     actcctctcc actccactcc acttcactcc actccactcc attccactcc acttctctcc      7080
     attccactcc aa                                                          7092
//


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