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EBI Dbfetch

ID   AUXG01000424; SV 1; linear; genomic DNA; WGS; HUM; 3946 BP.
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AC   AUXG01000424;
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PR   Project:PRJNA213624;
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DT   01-AUG-2013 (Rel. 117, Created)
DT   01-AUG-2013 (Rel. 117, Last updated, Version 1)
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DE   Homo sapiens scaf00977_reg01_ctg17, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-3946
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   "Sequencing the RPCI-11 Genome";
RL   Unpublished.
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RN   [2]
RP   1-3946
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   ;
RL   Submitted (30-JUL-2013) to the INSDC.
RL   Roche, 16 Commercial St, Branford, CT 06405, USA
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DR   MD5; 85fa4d094c40fa0c97904c96ad01772b.
DR   ENA; AUXG010000000; SET.
DR   ENA; AUXG000000000; SET.
DR   ENA-CON; KE557396.
DR   ENA-CON; GL000185.
DR   BioSample; SAMN02258483.
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CC   This is a subset of the whole genome assembly of RPCI-11 containing
CC   novel regions that do not exist in the GRCh37.p11 reference
CC   assembly, GCA_000001405.12.
CC   ##Genome-Assembly-Data-START##
CC   Assembly Method       :: Newbler v. 06/07/2013
CC   Assembly Name         :: RP11_1.0_unmatched_regions
CC   Long Assembly Name    :: RP11_1.0 regions unmatched to GRCh37p11
CC   Genome Coverage       :: 39.0x
CC   Sequencing Technology :: 454; Illumina MiSeq
CC   ##Genome-Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..3946
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="RPCI-11"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 3946 BP; 829 A; 1526 C; 257 G; 1334 T; 0 other;
     actccactcc actccactcc aatccactcc attacattcc attacattcc attcaactac        60
     attccattcc attcctttct tttgagagta tctcactttg tcatccaggc tggaacttaa       120
     tggcacaatc acagctcaca ttttatttca ctattccatt ccattccatt ccattccatt       180
     ccattccatt ccattccatt ccattccatt ccattccctt ccactaaatt cccttccatt       240
     tctttccctt tagagtacct cactctgtca accatcctgg agcacagtag caaatctcag       300
     gtcccctttc atttcaccat tctattgcat tccattccac tccactcctc cactccactc       360
     caatccattc cactccactc cattcctctc cattctagtc cactccactt ctttctattc       420
     caactcattc caatccactc ctttccactc cactccactc ccctccatcc cattccattc       480
     ccctccattc cattacattc ctttattttg acaggatctc actctgtcac acaggcttgt       540
     gtgcagtggc acaatcttag ctcacatttc atttcaccat tccattccat tccattcaat       600
     ggcatttcgc ttcactccag tcaattttat tccactccac tccactccaa acaattccag       660
     tccattcaat tccaatccac tccactcaac tccagtctgc tccattcaac tccactccac       720
     tccacttcac tccatcccat tcctctccac tccattctct ccactccact ccagtcccct       780
     ctactccact ccactccatt ccgttccact ccactccact ccacttcatt caactccact       840
     ccactgcact ccattccact ctactcccct ctactccact ccactccatt ccattccatt       900
     ccattccatt ccattccttt ctttccacaa gatctcactc tgtcataaag gatggatttc       960
     catggtacaa tctcagctca catttctatt cactattcca ttgtgttcaa ttccattcta      1020
     ttccattcca ttccactcta tttcccctca ctccactcca ctccattcca ttccactcca      1080
     tccaattaca ttagactcca atccactcca ctccattcca ctccgttaca ttacattcca      1140
     ttcgacttca caccattgca tttcattcct ttctttcgac gggatatcac agtgtcaacc      1200
     aggctggagt gcagtggcac aatctcagct cgcattacat gtcatctttc tattgcattc      1260
     cattctgttc cgttgcattc cattccattc cattccattc cattccattc cattccactc      1320
     cactccattc cactccactc cactccactc cactccactc cactccactc cactccactc      1380
     cattcaattc cattccattc cattccattc cattccattc cattccattc cattccattc      1440
     cattccattc cactctattc cattccattc cattccactc tattccattc cattcctttc      1500
     tttcgagagt atttcagtct gttacaaagc ctagagtgca gtggcacaat ctcagctcac      1560
     atttcatttc accattccat tccattcctt tccattctat tccattcaat tccattccat      1620
     tttactccat tccctccact ccactccact ccactccact acattccatt ccactccatt      1680
     gcactcctct ccactccact gcactccagt cctctccatt ccactccatc ccattccact      1740
     cggctccatt acactgcact caagtccacc ccaatcccct ccacttcatt ccattccatt      1800
     ccattccatc ccattcaatt tcactccatt gcattccatt ccttcctttt gacaggatat      1860
     cactgtgtct cccaggctgc tgcgcagtgt cacaatctca gctcacatta catgtcaact      1920
     ttccattgtg ttgtgttctg ttccattgca ttccattcta ttccattcca ttccattcca      1980
     ctccattctg ttccattcaa ttccattcca ttccacttcg ttccactcca ctccactcta      2040
     ctacattcga ttacatccga ttccattcca cttcattcca ctcctgtcca ctccactgca      2100
     ctccactcca ctccattcca ttatatccca ttccattcca ctccattcca ctccactcca      2160
     cttcactgca ctccactcca tccatttcac tccatcccat tccattcgac tccattccac      2220
     tccacttcac tccatttcaa tccattccac tcccttccat tcctttccat tccatttcac      2280
     tcctttgcat tccatttctt tctttcgaca ggataacact ctttccccca ggctggaatg      2340
     cagtggcaca atctcatctc acattacatg ccaactttca attacatggc attatattcc      2400
     attgcattcc attgcattcc attccattcc attccatagc attccattcc attccttttt      2460
     tcgagagtat ctcactgtgt cacccagcct ggagcgcagt ggcataatct cagctcacat      2520
     ttcatttcac cattccattc tactccattc ctttccattc cattggattc cactacacta      2580
     cactcctctc ttctccactc caattgattc tactccaatc cactccactc gattccagtc      2640
     cactccactc atttccattc catcccattc cattccactc ctttccactc cactccacgc      2700
     tactccagtc ctctccattc cattccactc cattccatcc cattcctttc ttttgacagg      2760
     atctccctct gtcacccaag ctggtgtgca gtggctcaat ctcaactcaa tttcatttca      2820
     ccattccatt ccattccatt ccattccatt ccattccatt ccattccatt ccactgcact      2880
     ccactccatg ccattcaatt ccactccact ccacttcagt acattccatt ccattacatt      2940
     ccaatccctt ctattccact cctttctttt gacaggatct tcttctgtca cgtgggctgt      3000
     agcttagtgg cacaatctca gcacacattt tttttttcgc cattcgattg tgttctgttc      3060
     gtttccgttc cattccgttc cattatattc tgctccgttc cacttcactc ccttaaactt      3120
     cattccaatc aattccattc cactccgctc cactccactc cattccagtc tactccattc      3180
     cactccactc caatccaatc cactcctctc cactccattc aattccacac gattccactg      3240
     cactcctctc cacaccactc cactccactg cactccattc cactgcactc cattccactc      3300
     cactccagtc cactccactc cactgccttc cattccactc cactccactc cattccactg      3360
     cactccattt cactccactc ccttccactc tactccactc cacttcattc cattccaagt      3420
     cattccattc cattcctttc tttccaccgg atctctctct gtcacaaagg ctgtagtgca      3480
     gttgcacaat ctaacctctc ctatctttac accattccat tgcattccat tccatccctt      3540
     tccattccac tctatttcac tccactccac tgcactctat cccatttctc tccattccat      3600
     gccattcgac tccaatccac tccactccac tcaactccat tccattccat tctattccat      3660
     tccatttcac tccattgcat tcccttcctt tcttttgaca agatatcact gtgtcacaca      3720
     ggttggagtg cagtggcaca atctcagctt acattatgtg tcaacttaca tttcattgca      3780
     ttctattcaa ttgcattcca ttgcattcca ttccattcca ttccattttg ttccattcca      3840
     tttcattcaa ttccattcca ttccactccg ttccactcca ctccactaaa ctcaactaca      3900
     ttccattaca tctgattcca ttccactcca ttctaatcct ctccac                     3946
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