spacer

EBI Dbfetch

ID   AUXG01000423; SV 1; linear; genomic DNA; WGS; HUM; 9469 BP.
XX
AC   AUXG01000423;
XX
PR   Project:PRJNA213624;
XX
DT   01-AUG-2013 (Rel. 117, Created)
DT   01-AUG-2013 (Rel. 117, Last updated, Version 1)
XX
DE   Homo sapiens scaf00977_reg01_ctg16, whole genome shotgun sequence.
XX
KW   WGS.
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-9469
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   "Sequencing the RPCI-11 Genome";
RL   Unpublished.
XX
RN   [2]
RP   1-9469
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   ;
RL   Submitted (30-JUL-2013) to the INSDC.
RL   Roche, 16 Commercial St, Branford, CT 06405, USA
XX
DR   MD5; 48439aed1957d6156f9172bf472ef533.
DR   ENA; AUXG010000000; SET.
DR   ENA; AUXG000000000; SET.
DR   ENA-CON; KE557396.
DR   ENA-CON; GL000185.
DR   BioSample; SAMN02258483.
XX
CC   This is a subset of the whole genome assembly of RPCI-11 containing
CC   novel regions that do not exist in the GRCh37.p11 reference
CC   assembly, GCA_000001405.12.
CC   ##Genome-Assembly-Data-START##
CC   Assembly Method       :: Newbler v. 06/07/2013
CC   Assembly Name         :: RP11_1.0_unmatched_regions
CC   Long Assembly Name    :: RP11_1.0 regions unmatched to GRCh37p11
CC   Genome Coverage       :: 39.0x
CC   Sequencing Technology :: 454; Illumina MiSeq
CC   ##Genome-Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..9469
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="RPCI-11"
FT                   /db_xref="taxon:9606"
XX
SQ   Sequence 9469 BP; 2002 A; 3787 C; 577 G; 3103 T; 0 other;
     tccactccat tcgattccgt tccgatgcac tgcattccat tccattcctt tctttcgaga        60
     ttatctcact ctgtcaccca gcctggagcg cagaggccca atctctgctc acatttcatt       120
     tcaccattca attccatacc attccattcc attcctctcc actccactcc actccactcc       180
     agtccattct actccactcc actccattcc aggccactcc cctcctttcc attcaatccc       240
     aatccattcc actcctttcc actccactac actgcactgc actgcattca attccattcc       300
     actccattcc attctattcc tttcttttga caggatctca ctctgtcact caggctgttg       360
     tggagtggca tcatctcagc tcacatttca ttttaccatt ccattccatt ccattgcgtt       420
     ccattccact gcactccaat ccactccact gaattccact ccattccacc aaaattaatt       480
     ccatttcatg gaattccaat cccttccatt ccactccttt ctttcgacag gatcttcctc       540
     tgtcacacag gctgtagcat agaggcacca tctcagcaca catttctttt ctccattcca       600
     ttccgtttca ttctgttcca ttctgttcca ttccattccg ttccactcca ctcaactcca       660
     ttccactcca ctccactcca ctccactcca ctccactcca ctccactcca ctccattcca       720
     ctccactcct ttgcattccg tttcactcca ttgcattcca ttcctttctt aggacaggat       780
     atcactgtgt cacccaggct ggagtgcagt ggcacaacct caactcacat gaaatgtcaa       840
     cttttcattg cattgcatta tattccattc cattccattc cattccattc aactccattc       900
     cattccactc cattcctttc cactccactc cactccaatc tactacattc catttcatcc       960
     aactcccttc cactccattc cactcctctc cattccactg cactcccctc gaatatatta      1020
     cactcaatcc tatttaattc cactccattc cactgcactc cactccacta cacttcattc      1080
     cattccattc tttcccattc cattcctctc catttctctc cactcaactt cactccacac      1140
     cactctagtc cacttcattc cattccattc catcctattc caatctaccc cactccactt      1200
     catttcattg cattcccttc gatcccattc ctttcctctc cattccactc cacttcactc      1260
     ccctatactc cactccacta cattctaccc taatcccctc cactccactc caagccactc      1320
     cactccattc catgccattc cattccattc cattccattc cattccattc cattccattc      1380
     cattccattc cattccattc cattccattc cattcctttc tttccaccgg atctcactct      1440
     gtcaaaaagg ctggagttca gtggtataat ctcagctcac atttcttttc accattccat      1500
     tgctttccat tccatcacgt tccattttac tctatttcac tccactccac tccattccac      1560
     cctattccat tcctttccat tcgatttcac accattgcat tccattcctt tgtttcaaag      1620
     ggatatcacg gtgtcaccca gactggagtg cagtggcaga atctcaggtc aaattacatg      1680
     tgaactttcc attgaattga attctattac attgcattcc attccattcc attccattcc      1740
     agtgcattcc attccattcc attccattcc ttttaattca attccattcc tttccaatcc      1800
     gttccactcc actccaatcc accccactac attctattac atgtgattcc attccactcc      1860
     attccactcc tctccactcc acagcattcc actccactcc attccactac attccattcc      1920
     attccactcc attccacagc aatcctctcc accccactcc actccacttc attccatttc      1980
     atcccattac attccaatcc cttccattcc actcctttct ttcaacagga actctctctg      2040
     tcacacaggc tgtagcatag tggtacaatc tcaacacaca tttcttttca ccattccatt      2100
     ccattccatt tcattccact ccattccatt ccattccatt ctatatcgtt ccattccatc      2160
     cactctactc cactacaccc cagtccattc tgctccactc cactccgttc ccctccattc      2220
     cgttccattt catccacgct actccactca ttccactcca ctccactcca atgcattcca      2280
     ctcaactcca tcccactttg ctacactcca cttcatttca ttccattcca ttctgtccca      2340
     tgccattcct ctcctttcca ctccactccg ctcctctcca ttccattcca ctccactcca      2400
     ctccattcca ttccactgca ttccactcca cgccactcca ttccactcca ctccattcca      2460
     ctccctccac tccactccac ttcactccac tccattccat tccactccac tccattcaat      2520
     tccttttttt tccacaggat ctcactctgt cacaaatact ggagtgcagt ggcagaatct      2580
     cagtgcacat ttcttttcac cattctattg cattccttta aaacccattc cattccactc      2640
     tatttcagtc cattccactc cagtacactc cattacattc cactccatcc ctttccatta      2700
     gaatccattc cactcccctc cactccactc cactccattg ctttccgttc cattccattt      2760
     catttcactc cattgcattc caatcctttc tttcaacatg ctgtcactgt ttcacccagt      2820
     ctggagtgca gtggcacaat ctcagctcac attacatgtc aacttacctt tgcattacat      2880
     tctattccat tgcattccac tgcattcctt tccattccat tccatttcac tccattcaac      2940
     tccactccac tccagtccat tacattccat tacatcagat tccgttgcac tccgttccac      3000
     tcctctccac tccactgcac tccactccat tccattccat tccattccat ttccttccac      3060
     tccattcaac ttcactccac cccaccccac tccaattgat tccattccat tctgtcccgt      3120
     tccaatcctc tccattccac tccactccac ttcactccac tcctctccag tccactccat      3180
     ttaattccat cccctgggat tccatcagat tcctttcttt cgagggtatc tcactctttc      3240
     aaccaccctg gagcgatgtg gcacaatctc agctcacatt tcatttcacc attctattcc      3300
     attacattac attctattct gttccactcc actccactcc atttcactcc actcaactca      3360
     actccactcc actccattac actacactac actccattcc actccactgc actgcactcc      3420
     actccattcc attccatttc actccattgc attccattcc tttctttaga caggatatca      3480
     ctgtgtcacc gaggctggag tgcagtggca caatctcagc tcacattaca tgtcaacttt      3540
     cctttccatt gcgttctagt ccaatgcatt ccattccatt ccattccatt ccactccgtt      3600
     ccattccact ccactccact ccaatccact acattccatt tcatccaact ctcttccact      3660
     ccattccact cctctccact ccagtgcgct ccactccaat atattcaact ccatcctatt      3720
     taattctgct ccattccact tcactccatt ccaccccact ccactctact tcattccatt      3780
     ccattcctct ccattccact ccactccact tcactccact ccacatcagt ccacttcatt      3840
     ccattccatt ccatcccatt gcactccaac ccactctact cctcttcaat gcatcacctt      3900
     ccatcccatt tctttcctct ccattccact ccagttcaat ccactctact ccactccact      3960
     ctacttccct cctctccact ccactccatt ccattccatt cctttttttt cacatgaccc      4020
     cgctctgtca aaaaggctgt agttcagtag tacaatccca tctcacattt cttttcacca      4080
     ttccattgct ttccattcca tcccattcca ttccactcta tttcactaca ttccaatcca      4140
     tttcattcca ctccatccca catctttcaa ctccactcca cttaattcca ttccattcca      4200
     tcacattcca ttccactaca ctcccttcca ctcccctcca ctcccctcca ctcccctcca      4260
     ctccactcta ttccactccg atccactcca ctccagtcca ctccattcaa ttccatttca      4320
     gtccactcct ctctactcca ttccactcca ctccattcca ctccactgaa ttcccctcca      4380
     ctccactcca ttctactcca ttccacttca ttctattcca ctccactcca ctccaatcca      4440
     ctcctttcca ctccattcca ctccactcca ttccatgcca ctccactcca ttccattcct      4500
     ttctttccac aggatctcac tctgtcacaa atgctggagt gcagtggcac catctcagca      4560
     catttctttt caccattctg ttgtattcct ttccatccca ttccattcca ctctgtttca      4620
     ctccattcca ctccactcca ctccattcgg ttccacccca tacctttcct ttcgactcca      4680
     ttccactcca ctccactcca ctccattgca ttccattcgt ttccattcca tttcactcca      4740
     ttgcattcca ttcctttctt tcgactagct atcactgtgt cacccaggct ggagtgcagt      4800
     ggcacaatct cagctcacat tacatgtcaa ctttccattg cattgcattc tcttccgttg      4860
     ccttccacta cattgcattc cattccagtc aattccattc tattccactc cattccactc      4920
     cactgcacta cactgcagta cattccattc cattcattcc attctactcc attccactcc      4980
     actgcactcc actccactac attccattac atctgattgc gttccactcc attccactcc      5040
     tgtccactcc actgcacacc actccccttt gttccattcc attccgcacc attcaagtgc      5100
     agtccactcc accccactcc attccacttc attccattcc aatccattca gtcccattcc      5160
     attcctctcc attccactcc actccatttc actctcctcc actattcttc agtccactcc      5220
     attccatttc attccacggc attccattcc attcctttct ttctagggta tctcactcta      5280
     tcaaccagcc tggagcactg tggcacaatc tcagctcaca tttcgtttca ccattccatt      5340
     ccattccact cctctccact ctattccaca cttctccact tcattccatt tcatcccatt      5400
     ccattcctct ccattccact atagtccact tcactccact ccactaaaat ccactccaat      5460
     ccattccata ccattccatt ccactgcact ccattctact ccactcaatt cctctccgct      5520
     ccactccaat ctatttcatt ccattccatt tcaatccctt ctattccact ccttcctttt      5580
     gacaggatct ccgtctgtca cacaggctgt agcgtactgg cacaatctca gcacacattt      5640
     attttcacca ttctctccca ttctcttcca ttccattgca ttccattccg ttccattcca      5700
     ttccattcaa tttcgttcca ctccactcca ctccactcaa ctccattcca cttcactgca      5760
     cttaactcca ctccattcca ttccacttca ctctattcca atgcactcta atcctctcca      5820
     ctctattgca ctcaactcca ttccactcca ctgccctccc ctccactcca ttccactcca      5880
     ctcaattcca atccattcca ctacaatcca cttccactcc actacaatcc actccattcc      5940
     actccactcc attccactct actccactac aatccactcc attccactcc agtccattcc      6000
     actctactcc actacaatcc actccattcc actccactcc attccattcc actgcattcc      6060
     attccattcc tcagcattcc attccaatcc tttctctcga cagtatctca ctctgtcacc      6120
     cagccaggag ttcagtagca caatcacagc tcacatttca tttcatcatt ccattccttt      6180
     tcattccatt cgttcaattc cattccattc cacttcactg cactccactc cattccactc      6240
     cactccactc cacttccctc cgttccactc caatccatcc cactccactc cactatattc      6300
     cattctgttc cactccattc cattcctttc tttccacagg atctcactct gtcacaaagg      6360
     ctgatgtgca gtggctcaat ctcagctcag atttcttttc accattccat tccatcttat      6420
     tcctttccac tccatatcac tccactccca tcctctccac tccgttccat tccactactt      6480
     cccattccat ctgactccat tccacttcac tccactccat tccattactt tccattccgt      6540
     tctatttcac tccattgcat tccattcctt tcctttgaca ggatatcact gtgtcagcca      6600
     ggctggattc aagtgacaca atctcagctc acagtacacg tcagctttcc attatattgc      6660
     actctcttcc atttcattca attccattcc attctagtcc attccattcc attccactcc      6720
     attccattcc attccactcc attcattcca ttccattcca tgccatgcca tgccattcca      6780
     tgccatgcca tgccattcca tgccattcca ctctgttcca ctctattcca ctacaccaca      6840
     ccacattccg ttacatcaga ttccattcca ctccattcca ctcctctcca ctctactgaa      6900
     ctccactcca ctccattcca ctcgatccca ttcaattcca ctccattccc ctctactccc      6960
     ctccacccca ctccactcca cttcaatcca tttcatttca tcccattcta ttcctctcca      7020
     tttcactcca ctccactgca ctcctgtcca ctgcattcca ttccatttca ctgctttcca      7080
     ttccattcct ttccctcgag attatctcac tctgtcaccc agcctggagc acagtggcac      7140
     aatctcagtc ccatttcatt tcaacattcc attccattcc actccaatcc actccactcc      7200
     aatccattcc actccactcc actcctctcc attctagtcc actccacttc tttccattcc      7260
     atctaattcc aatccactcc tttccactcc actccactcc ctccatcccg ttccattcca      7320
     ctccattcca ttccatttct ttattttgac agtatctcac tctgtcaccc aggcttgtgt      7380
     gcagtggcac aatcttagct cacatttcgt ttcatcattc cattcactcc actccaatca      7440
     attttactcc actccacttc aaaccatttc attccattcc attcaaatcc actccactcc      7500
     agtccgctcc attcaactac actccactcc acttcactcc atcccattcc actccactcc      7560
     attgtactcc actccactcc agtcccctct aatccactcc attccactcc attccattcc      7620
     actccactcc acttcattga ctccacacaa cagcactcca ttccactcta ctcccctcta      7680
     ctccactcca ctccactcca ttccatttca ttccgttcca ttccattcct ttctttccac      7740
     aggatctcac tatgtcaaaa aggatggagt tcagtggtac aatctcagct cacatttttt      7800
     tcaccattcc attgctttcc atttcatccc attccattcc actctatttc actccactcc      7860
     actccactcc tttccattcc actccattgc attccattct attggatttc acaccattgc      7920
     attccattcc tttccttaga ctggatatca tggtgtcacc caggctggag tgtagtggca      7980
     caatctcagc tcgcattaca tgtcaacttt tcattgcatt gcattctatt ccattgcata      8040
     tcattgcaat ccattccaat gcattccatt ccattccatt ccttttcatt caattccatt      8100
     cgtttccact ccattccact ccactccact ccattccact actttccatt acatgtgatt      8160
     ccattgcact ccattccact cctctctact ccacagcact ccactccact ccattccact      8220
     acatcccatt ccattccact ccattccact gcaatccaca gcaacgcact ccactccact      8280
     tcattccatt tcatcccatt ccattccatt cccttccatt caactccttt ctttcgacag      8340
     gatctctctc tgtcacacag gctgtagcgt agtggcacaa tatcaacaca catttctttt      8400
     caacattcca ttccattcca ttccattcca ttccattaca ttccattcca ttgcattcca      8460
     ttacattaca ttacattaca ctcaactcca ctccaatcca gtccactcgc ctccaatcca      8520
     atccattcca ctccactcca ttccatttca ctccactcaa ctctattcat tccactccac      8580
     tccactccaa tccaatccat tccactccac tccatcccac tccactccac tccactctgt      8640
     tccaatccat tccactccat tccactctat tccagtccac tccactgttt cactccactg      8700
     cattccaatc cactccactc cagtccactt cactccattc cattccactc cactccattc      8760
     cacttcgctc cactccactc cactcctttc caatccattc cattgcattc cattacactc      8820
     aactgcattc cattcctttc cattcctctc cacaaacctc cactccactc cattccattc      8880
     cattccactc cattccattc ctttctttcc acaggatctc tctctgtcac aaaggctgga      8940
     atgcagtgac acaatctcag ctcacatttc tttacaccat aacattgcat tccttcccat      9000
     ccctttccat tccactctat ttcacgccac tccactccac tccattctat tacattccat      9060
     ttcactccat ttaatttcat tcccttcttt tgacaggata tcactgtgtc ccccaggctg      9120
     gaatgcagtg gcaaaatctc agctgacatt acatgtcaac tttcgattgc atttcattgc      9180
     ttccgttgca ttccattgca ttcctttcca ttccattccc ttccattcca ttccattgca      9240
     ttccattcca ttccattcca ttccattcca ttccattcct ttgcactcca ttccacttca      9300
     ctcaactcca ctccactaca ttccattata tattattcca ttacactcca ttccactcct      9360
     ctctactcca ctgcacttca ctccactcca atccactcca tcccatttca ctcctctcca      9420
     ttgccctaca ctccagtcca ccccactcct ctccacttca ttccgttca                  9469
//


spacer
spacer