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EBI Dbfetch

ID   AUXG01000420; SV 1; linear; genomic DNA; WGS; HUM; 2708 BP.
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AC   AUXG01000420;
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PR   Project:PRJNA213624;
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DT   01-AUG-2013 (Rel. 117, Created)
DT   01-AUG-2013 (Rel. 117, Last updated, Version 1)
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DE   Homo sapiens scaf00977_reg01_ctg13, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-2708
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   "Sequencing the RPCI-11 Genome";
RL   Unpublished.
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RN   [2]
RP   1-2708
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   ;
RL   Submitted (30-JUL-2013) to the INSDC.
RL   Roche, 16 Commercial St, Branford, CT 06405, USA
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DR   MD5; 148c9d6a9b5f5e8a58d93a24178d7c9f.
DR   ENA; AUXG010000000; SET.
DR   ENA; AUXG000000000; SET.
DR   ENA-CON; KE557396.
DR   ENA-CON; GL000185.
DR   BioSample; SAMN02258483.
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CC   This is a subset of the whole genome assembly of RPCI-11 containing
CC   novel regions that do not exist in the GRCh37.p11 reference
CC   assembly, GCA_000001405.12.
CC   ##Genome-Assembly-Data-START##
CC   Assembly Method       :: Newbler v. 06/07/2013
CC   Assembly Name         :: RP11_1.0_unmatched_regions
CC   Long Assembly Name    :: RP11_1.0 regions unmatched to GRCh37p11
CC   Genome Coverage       :: 39.0x
CC   Sequencing Technology :: 454; Illumina MiSeq
CC   ##Genome-Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..2708
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="RPCI-11"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 2708 BP; 557 A; 1067 C; 179 G; 905 T; 0 other;
     ttcctttctt tccacaggat ctcactccgt caaaaaggct ggaaatcagt gatacaatat        60
     cagctcacat ttctttcacc attccattgt tatccattcc atcccattct ttccactata       120
     tttcactcac ctccactcca ctccgtacca ttcctttgca tcccgttcca ttcgacccca       180
     gtacactaca ctccagttca ctccattcca ttcctttcct ttccattcca ttccattcca       240
     ttccattcca ttccattcca ttccattcca ttacattcca ttccattaca ttccattatt       300
     tcacaccatt gccttccaat cctttctttc aacgggatgt cacggtgtcc cccaggctgg       360
     agtgcagtgg cacaatctca gctcgcatta catgtcaact ttccattgca ttacattctg       420
     ttccattgca ttccattgca ttccattcca ttccattcca ttccagtgca atccattcga       480
     ttctatctcc ttccttttca ttcaattcca ttactttcca ctcctttcca ctccactcct       540
     ttacattaca tgcgattcca ttccactcca ttccactccc ccgcactcca cttcactcca       600
     ttccactaca tcccattcca ttccactcca ttccactgca atccactcca cctctctcca       660
     cttcacttct ttccatttca tcccattcca ttccaatccc ttccattcca ctcctttctt       720
     tcgacaggat ctatcactgt cacacaggct gtagtgtact ggcacaatct caacacacat       780
     ttcttttcaa cattccatca gattccgtta cactgcactc cactccactc cactccagga       840
     cactccactc cactccactc aattccattt cactcctctc tactccactc attccactcc       900
     acttgactct cctccaactc attccactcc actccactcc actccactcc actccattcc       960
     actacttccc attccattcc tctccattcc actccactcc acttcagtcc cttccactca      1020
     cctccagtcc ctgccattcc tttccattcc actgcattcc attccattct tttttcgaga      1080
     gtatctcact ctgtcaccca gcgtggtgtg cagtgactta atctcagctc acatttcatt      1140
     tcaccattcc attccattcc attccattcc attcctttcc actcctcccc aatccactct      1200
     tctccagtcc aatccattcc actccactcc attcctgtcc actccacttc tgtccattct      1260
     atcccattcc gttcccctct tttccactcc acaccactcc agtcaactct actcaactcc      1320
     actcctttcc attccactct attccattcc attgctttct ttgtgagtat ctcacactgt      1380
     cacccaggct ggtgttcagt gacacaatct cagctcacat ttcaattcac cattccatga      1440
     cattcctttc cattccattc cattcaattc cattccattc ctttccattc cactgcactc      1500
     caatccactc cattcaatgc cactccatgg cactcaaggc cattccattc cattatattc      1560
     caattccttc tcttctactc ctttcttttg acaggatctc cctttgtccc actgggtgta      1620
     cagtagttgc actatctcat cacacattat tttcaccatt ctattgcttt gcgttctgtt      1680
     ccgttccctt atgttccgta ttgttccact ccgttccact ccactccctt ccactccact      1740
     ccattcaact ccactccact cctctccact ccactccact ccactccatt ccactaaaca      1800
     ccactccact ccaacccact acattccact ccattccatt ccacttattt ccactgcact      1860
     ccactccact ccattccact cccctccagt ccattccact atacttcact ccattcctct      1920
     ccactccatt ttactccact gcattccact tcactccact ccactccact ccactccatt      1980
     ccattccatt ccattccact ccattccatt ccattccttt ctttccacac aatgtcactc      2040
     tgtcacaaag gctgtagtgc attggcacaa tcttagcttc catttattta caccattcca      2100
     ttgcattcca ttccgtccca ttccaatcca ttctatttca ctccacccca ctccactcca      2160
     tcccattcca ttcgattcca ttccactcca ctccactcca ctccactcta ctccattcca      2220
     ttccaaccca tgccattcca ttgcactcca ttgcattcca ttcctttctc ttgacaggat      2280
     ttcactgtgt cacccaggct ggagagcaca ggcagaatgt cagctcacat tacaggttaa      2340
     ctttccattg ctttgcattc tattccattg catttctttc cattccattc cattctgttc      2400
     aattctattc gattcaattc cattccgttc cattccattc catgcggtcc actccactct      2460
     actccactac attccattac atccgatttc attccactcc attccactcc actacactct      2520
     actccactcc atcccattcc attccgctct attccactgc actgcactgc acctcaatcc      2580
     actcaacttc attccattcc attccatccc attccattcc tctccattcc actccattct      2640
     acttcacacc actccactcc agtccattcc attccattcc attccattcc attccattcc      2700
     attccact                                                               2708
//


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