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EBI Dbfetch

ID   AUXG01000418; SV 1; linear; genomic DNA; WGS; HUM; 3858 BP.
XX
AC   AUXG01000418;
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PR   Project:PRJNA213624;
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DT   01-AUG-2013 (Rel. 117, Created)
DT   01-AUG-2013 (Rel. 117, Last updated, Version 1)
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DE   Homo sapiens scaf00977_reg01_ctg11, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-3858
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   "Sequencing the RPCI-11 Genome";
RL   Unpublished.
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RN   [2]
RP   1-3858
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   ;
RL   Submitted (30-JUL-2013) to the INSDC.
RL   Roche, 16 Commercial St, Branford, CT 06405, USA
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DR   MD5; de913baaeecc4ba4e1553455c7863c40.
DR   ENA; AUXG010000000; SET.
DR   ENA; AUXG000000000; SET.
DR   ENA-CON; KE557396.
DR   ENA-CON; GL000185.
DR   BioSample; SAMN02258483.
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CC   This is a subset of the whole genome assembly of RPCI-11 containing
CC   novel regions that do not exist in the GRCh37.p11 reference
CC   assembly, GCA_000001405.12.
CC   ##Genome-Assembly-Data-START##
CC   Assembly Method       :: Newbler v. 06/07/2013
CC   Assembly Name         :: RP11_1.0_unmatched_regions
CC   Long Assembly Name    :: RP11_1.0 regions unmatched to GRCh37p11
CC   Genome Coverage       :: 39.0x
CC   Sequencing Technology :: 454; Illumina MiSeq
CC   ##Genome-Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..3858
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="RPCI-11"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 3858 BP; 814 A; 1616 C; 178 G; 1250 T; 0 other;
     ctgcattcta ttcctactcc agtcaaatct attccattct cattccactc cattccattc        60
     cactccactc cactccattc cattccactc cattctattt cacttcattc cattccagtt       120
     cattccattg cagtccactc cactcgcctc cactccactc actcaattcc acaccactct       180
     tctccattcc attccactcc tctcccctcc actctactac actccactcc accccacttc       240
     attccattcc gctccattcc attccattcc tttctttcca caggatctct ctcagtaaca       300
     aaagctggag tgcagtggca caattgcaac tcacatttca tttaaccatt ccattgcatt       360
     ccattccatc ccattccatt ccactctatt tcactcaact tttctccact ccattccatt       420
     ccactcaatc ccattctgtt ctactccttt ccactccact cctctcaact ccactccatt       480
     ccattccact gcataacatg ccattcgact acattccact ccactccact ccactccaat       540
     ccactccatt ccattccatt ccattccatt ccattccatt ccattccatt ccattccatt       600
     ccattccatt tcactccatt gcattccatt cctttctttc aacactatat cactgtgtca       660
     cgcaggctta agtgcagtgg cacaatctca gctcacgtta catgtcagca ttccattgca       720
     ttgcattcta tttcattcct ttccattcca ttccatttca ttccattcca ttccactgca       780
     ctccactcca ttccattcca ttccactgca ctccactcca ttccactcca ttccattcaa       840
     tttctttaca ttccattcca ctccactcca gtccactaca ctctattcca ttccattcca       900
     ctccactcca ctccactaca ttcaattgaa ttccattccc ctgcactcca ctcaatttca       960
     ttctattcca ctccatttga ttacagtcca ctccactcca ttccacccca ctccactcca      1020
     ttccattcct tcccactcca ttccagtcca ctccattcca ttccattcca ttccattcca      1080
     atgcattcca ttccactcca ttccagtcca ctccagtcca ctccactcaa ctccatttca      1140
     tgccgttctg ctgcactcca ttctatttca ctccactgca ttctattcca ttccattcca      1200
     ctccattgca ttccactcct ctccattcca ttccactcca ctccattcca ttgcattcca      1260
     ttccagtcca ctccactgca cacgactaca ttccattcaa ttccattctg ctccactgaa      1320
     ctctaatcca ttccattgta attcattcaa ttccactcca ctccaatcca ctccaatcca      1380
     ttccactcca ttctactcca ttccattcct ttcctctcca ttgcattcca ctttattcca      1440
     ttccactgca ttccactcca ttccactgct tcccttccat tccactgctt cctctccatt      1500
     ccattccatt ccattccatt ccattccatt ccattccatt ccattccact ccacttcatt      1560
     ccactccatt ctattccatt ctactacact ccacaccact ccactccatt tcactccatt      1620
     tcaatccatt ccactccatt ccattcccct ccattccatt ccactctatt gcactccact      1680
     caactccact ccattccact gctctccatt ccaatccact ccactccatt ccattccact      1740
     ctactccact ccagtctact cgactccact ccattccact ccattccact ccactcaagt      1800
     ctactccatt ccattacaat cctctccatt ccattccact ccactcctct acactccatt      1860
     ccactcctct acacattcct tctactcctc tccactccct tccactctac tccactccat      1920
     tccgttccat tccactctac tccagtccat tgcactccaa tccactccac tccactacac      1980
     tcaattccac tccagtccac tcctttccac tcctctccac tccactgcac tccactccac      2040
     tccattccat tccttcccat tccattcgac tccattcaac tccactgcac tacactccag      2100
     tccactccat tctagtccat tccattccat tccatttcac tccattctat tccattcctt      2160
     tctttccaca ggatatcact gggtcactca gactggagtg cagtgccaca atctctcttc      2220
     acattacatg tcaactttcc attgcattgc attctattcc tttgcattgc attacattgt      2280
     cttgctttgc agtgctttgc attgcattga attgcattcc attccatttg attcctttta      2340
     tttccactac cctccattcc actccattcg atgccacacc actccatttc attccattcc      2400
     cctccagtcc attccattcc tccccactcc actacactat accccagtcc actccattcc      2460
     attcaactcc actccatttc gtttcactca actccattcc attccattcc attccattcc      2520
     acttcagtcc actccaatgc tttccgttcc cctccgttcc actccattcc agtccacccc      2580
     actccactcc actctattcc attccattcc acaccactcc actccattgc aatccactcc      2640
     actgcactaa attttgctcc actccactcc actcaactcc attacaatac actccacttc      2700
     actccactcc aattccactg cactacactc cattccattc cactctgttc cactccattc      2760
     cactccagtc cactccatcc ttttgcattc cactccattg cactccacac ctctctacta      2820
     cactcagttc cattcgaatc aattccattc cgctcctttc tttccaaatt aactctctct      2880
     gtcacaaaag ctgaagtgca ctggcacagt ctcagttaac atttcttttc accattccat      2940
     tgcattctat tcctcaaatt ccattccact ctatttcact ccactccact ccattacatt      3000
     ccactccatt ccattccatt cgactccttt ccactcctct tcacttcatt ctaccccact      3060
     ccactccaaa acactccatt ccattccatt ccattccatt ccattccatt tcatttcatt      3120
     ccattgcaat ctgtcaattt ctttcgacag gatgtcactg tgtcacccag gctgcagtac      3180
     aggtgcacaa tctcagctca cattacatgt ctactttcca ttgcattgca ttgtattcca      3240
     ttccattaga ttccattgca ttcctttcca ctccactgaa ctccacccca ctccactcca      3300
     ttccattcca ctccattcca cgccatgcca ttccattcca atccactcca ctgcattcca      3360
     ctccactcca ctgcaggaca ctccagtcca ctcctctcca ttccattcca ctccactcca      3420
     ctccattcaa ctccactcca ttccatttta tttcactcca ttccactcct ctccactgca      3480
     ttccattcca ttctactcca caccagtcca ctccactcca ctccattcca ctccacacca      3540
     ccccattcca atctattcca ttccagtcca ctcctctgca ttcccttcct ctccattcca      3600
     ctccattcca ccccactcca ctccactcca ctccactaca ctccattcca ttccactcca      3660
     ctccactcca caccactcca ctccattcca ttcctcatcc attccactcc actctactcc      3720
     attccactca ataccactcc gttccactcc attaccttcc actccatttc actcccttcc      3780
     tctccactcc attccattcc actccattcc attccattcc actccactcc actccattcc      3840
     actcctcccc actgcatt                                                    3858
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