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EBI Dbfetch

ID   AUXG01000415; SV 1; linear; genomic DNA; WGS; HUM; 10335 BP.
XX
AC   AUXG01000415;
XX
PR   Project:PRJNA213624;
XX
DT   01-AUG-2013 (Rel. 117, Created)
DT   01-AUG-2013 (Rel. 117, Last updated, Version 1)
XX
DE   Homo sapiens scaf00977_reg01_ctg08, whole genome shotgun sequence.
XX
KW   WGS.
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-10335
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   "Sequencing the RPCI-11 Genome";
RL   Unpublished.
XX
RN   [2]
RP   1-10335
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   ;
RL   Submitted (30-JUL-2013) to the INSDC.
RL   Roche, 16 Commercial St, Branford, CT 06405, USA
XX
DR   MD5; 0b9d44cd82232ab0b0ba683a30ba6de0.
DR   ENA; AUXG010000000; SET.
DR   ENA; AUXG000000000; SET.
DR   ENA-CON; KE557396.
DR   ENA-CON; GL000185.
DR   BioSample; SAMN02258483.
DR   Ensembl-Scaffolds; AUXG01000415.1:1-10335; homo_sapiens.
XX
CC   This is a subset of the whole genome assembly of RPCI-11 containing
CC   novel regions that do not exist in the GRCh37.p11 reference
CC   assembly, GCA_000001405.12.
CC   ##Genome-Assembly-Data-START##
CC   Assembly Method       :: Newbler v. 06/07/2013
CC   Assembly Name         :: RP11_1.0_unmatched_regions
CC   Long Assembly Name    :: RP11_1.0 regions unmatched to GRCh37p11
CC   Genome Coverage       :: 39.0x
CC   Sequencing Technology :: 454; Illumina MiSeq
CC   ##Genome-Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..10335
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="RPCI-11"
FT                   /db_xref="taxon:9606"
XX
SQ   Sequence 10335 BP; 2214 A; 3182 C; 1652 G; 3287 T; 0 other;
     ttctattcta ttccattcta ttccattcca ctccactcca ctcctttccg ttacaataca        60
     ttccactcca ttccactcta ctccactcca ctgaactcca ttccattgca ttccactcca       120
     ttttattcca ttacattcca ctccactcca caccactcca ctccattcca ctccattcca       180
     ctccattcct ttccattcca ctccactcta ctccactcct cttcactatg ctccattcca       240
     ttgcattcca atccactcca ttccactcca ctcccttcct ttccattgca ctacacccaa       300
     ttccactcca ctccactcca ttccccttca gtccagtcca ctccacccca tgccactcct       360
     ctgtagtgca ttccactcca ctgcactcca ctctactcca atccactcca ttacattcca       420
     ttccgtttga tttcactcca ctgcattcca ttcctttctt tcaacaagat atcattgtat       480
     cacccagact ggagtgcagt ggcacagtct caactgacat tacatgtcct ctttcttttg       540
     cattgcattc tattccattg ccttgcattg cattgcattg cgttgcattc cagagcattg       600
     tattgcattc cattccattc cattcctttc catcccattc cattccattc cacttccttc       660
     cattccattc aaccccattc acctccactc cactccactc caccccactc cattgcattc       720
     cattccatta cagtgcactc cactgcactc cattccattc cacttcaatc cactccactc       780
     cactcctctc cattaaattc cattccattc cactctattc cactcttctc caccacactt       840
     aactccattc cattccattc cattccattc cattccactc cattccattc catcccactc       900
     cattccagtc cattccactc cactccactc cactccacta tattactttc cattcctctc       960
     actccactcc attccactcc attccacttc actccactcc attccagtcc actccactgc      1020
     atcccactgc actccactgc attccattcc actccactcc attcccttcc attcaattcc      1080
     acccccttcc actccactcc attccactcc cctctgttcc atttcacccc actcatttcc      1140
     attcctgtca actccattct actccactct actccattcc tttcctttct attccactcc      1200
     ataccactcc attccattcc attctactcc actcaaatcc acttcattcc actccattcc      1260
     actccagtga actcctttcc actccattcc attaccttcc actccactcc tctccgttcc      1320
     gttccattct actccattcc actctactcc acttcactcc actccaattc actccgctcc      1380
     attccattcc aatcctttcc actgcattcc acttcactcc attccattcc attccactcc      1440
     accccattcc actcctctcc attccattcc aatccagttc aatccgctcc accccattcc      1500
     aatccacccc actgtatacc actccaatcc actccattct actccaatcc agtccattcc      1560
     attccatttc tctccactgt attccattcc tttctttcaa caggatgtca ctgtgttacc      1620
     caggctggag tgcagttaca gtatctcagc tcaaattgaa tgtcaacttt ccattgcgtt      1680
     gcattctatt tcattgcctt acaatgcttt gcgttgcatg gcattccatt gcattgcaaa      1740
     gcattccatt ccattccatt ccattccatt ccattccatt ccattccatt ccattccatt      1800
     ccattcgttt ccattccatt ccactccatt ccattccatt cctttcttta aacaggatct      1860
     ctctctgtca caaaggcaag agtgcagtgg cagattctca gcttacattt attttcacca      1920
     ttccattgta ttccattcca tcccattcca ttctactcta tttcactcca ctccacttct      1980
     ctccattcct ttccaatcga ctccattgca ctccattcca atccactcca ctccactcca      2040
     ttccattcca ttccatttca ctccattgca ttccattcct tcctttcgac aggatatcac      2100
     tgtgtcacca agacttaatt gtagtggcac aatctcacct cacattacat gtcaactttc      2160
     cattgcattg tattctactc cattgcattc cattgcattc ccttccattc ctttgtattt      2220
     cattccactc cactccattg cactccattt cactccactc ctttgctctc cactgcattc      2280
     cactacattc cttttcactc tactccattc cactccaata gactccacta aacgccactc      2340
     cattccattc cactccactc cactccaggc caatccagtc cactccattc cactccactc      2400
     caatccattc catttgactc cactccattc cattccactt cactccatta caatcctatc      2460
     tactccactc cattccactc cactccactc cattccattc ctgtccaatc cactccattc      2520
     ctctccactc caccccactc cactccattt cattccactc tactccattc cactccactc      2580
     cactggattc caatccactc caccccactg catccattcc attccattcc actgcactcc      2640
     actcctctcc attccactcc attccattcc attccactcc attccactct actcccctac      2700
     tctccactcc aatccactcc actcctttcc attccattac attccactct attccactgc      2760
     tctccatccc attccattct tctcctcccc attccacacc tctccactcc tttcctctcc      2820
     tgtcccatcc actctaaccc attccactcc accccattcc actccacccc actgcattcc      2880
     actccactcc atgccattcc attccactgc attccactcc aatcccctct acttcactcc      2940
     actccactcc tctccagtac agtctgttcc tttccactgc attaatttcc attccttttt      3000
     ttggaaggat ctcactctgt cacccaggct gctgtgcagt ggcacaatct cagctcacat      3060
     ttcatttctc ctttccgttc cattccattc cactgcactc cactccaacc cacttaattg      3120
     cattccactc cactccaatc cgttacattc cattcctatc caatccctta cattccactc      3180
     ctttcttttg aaagtatatc cctctgtcac cgatgctgta gcatagtcat gcaatctcag      3240
     cacacatttc ttttcaccat tccattgcgt tccattccat ttctctccac tcccttccac      3300
     tgctttccat tccactccac tcaactccat tccattgcaa tccactgcac tcgactccac      3360
     tcagtttcat tccattccac tccattcccc tcccctcctc tcctttccat tccaatcctc      3420
     tccattccac tccattccat tccattccat tccattccat tcaactcgtt ttcactccac      3480
     tccactccac tccttcccat tccactccat cccattccat tcgactccat tccactccac      3540
     tccactcctc tcttttctaa tccacttcat gcgattccat tccattccat tccatttcaa      3600
     accgttgcat tccattcctt tcttttgaga ggatatcact atgtcaccca ggctggtgtg      3660
     cagtggtata atctcagcta acattacatg tcaactttcc attgcattgc attctattcc      3720
     tttgctttgc attgcattgc attgttttcc attaccttgc attctattcc attccgtttc      3780
     attccagggc attcctttgc attccactcc tttccattcc attccactcc actccatttc      3840
     actcaacttc actccactcc attccattcc attccattac actcactcca ctccatacca      3900
     tcccaccctt tccactccat tccactcaat tccagttcac ttcactccag tccaatccac      3960
     tcgattccac ttcaatccat tccgttccat tccactccat tccattccac tccacttcat      4020
     tccattccac tccaccccat tccattccag tccactgcac tccatcgact ccatttcatt      4080
     ccattccatt ccactccact gcacaccact ccattccatt acacaccatt cctttccact      4140
     ccaccccact ccaatccatt cttgtccact ccactccaat gggggcattg ttacatattt      4200
     ctgcactgat cacccaggta atgcaactgt tgtctacact ctgcctacag gggcattgtg      4260
     acatatcact acactgatcc cacaggtgat gagactcttc tccacgctct gcctacaggg      4320
     gtctttgtga catatcactg cactgatcac tcaggtgatg ggactcttct ctatactctg      4380
     cctagagggg gatttgtaac atagttttgc tctgaccacc caggagatgg aagtcttgtc      4440
     taggctctat ctatgggggc attgtgtcaa atatccgcac tgatcatcga ggggatttaa      4500
     cgttgtcaag gctctgtcta cagggatttt tgtggcatat cactgcatta atcaccaaga      4560
     tgatgtaact cttctctagg ctctgtttac atgggcattt tcacctatca ctgcactgat      4620
     cacccaggtg atgtaaccct tgtctaggct ctgcctacca gggctttgtg acacatctct      4680
     acactgatca cccgggtgat gtaagtcttt gttggatctg cctatgggag catgcgacat      4740
     atctctgcag tgatcaccca ggtgacagga cccttttcta ggctctctgt atgggggatt      4800
     tgtgacatat ctccgcactg atcaccaagg tgatgtaacg tttgactagg ctctgcctac      4860
     tggggcatag tgacatatca ctgcactaat caccgagctg atgtacctct tacccaggct      4920
     ctgccaatac ggggtctttt gacatatctc tgcactgatt gtctaggtga tgttactctt      4980
     gattacgttc tgcctgcagg ggcattgtga aatatatatt tactgatcaa acaggatatg      5040
     taactcttct ctaatctctg tctacaggtg gcattgtggc ataacactgc actgatcacc      5100
     caggtgatgg gactcttctc caggttatgc ctactgggga cactgtcaca tatttctgca      5160
     gtgatcaccc aggtgacgga cttttgtctt ggatctggct atgggtgcaa tgtgacatat      5220
     ctctgcattg atcatccagg tcatgtaact ctggtctaag cactgcctaa agggacattg      5280
     tgacagatct ctgcactgat cactcaggtg atctaactat tgtctaggtt ctgcttaaag      5340
     gagccttgtc acatacctct gcactgatta ccgaggtgat gtaactcttg tcaaggatct      5400
     cctttcaggg ggtattgtta cacgtctctg aactgatcac ctaagtgatg tgacactagc      5460
     gtaggctttg cctacagggg cattttgaca tatctctgca ctgttaaccg aggtgatgta      5520
     actattttct aggctgtgac cacaggggga tcgagacata tatctgcact aatcgccagg      5580
     tgatccaact gttgtctggg ctctgcctac tggggacatt gtgacatatc tctgcactga      5640
     tctcccaagt gatgtaactt ttgtctaggc tctggctacg cggcattttg acatatcact      5700
     gcactggaca cccaagtgat ataactcgtg tctaggctct gcctacaggg ggcctgtgac      5760
     atacctctgc actgatcacc caagtgatgt aactcttgtc tgggatctgc ctgcaggttg      5820
     ctttgtgaca tatcccgtca atgatcaccc aggtgatgta ccacttgtca aggctctgcc      5880
     tacaggggca ttgtgaagta tctctgcact gatcacctag gtcatataac ccttgtctag      5940
     gatctctctg cagtggcatt gtgacatatc tctgcagtga tcacccaggt aatgtaactc      6000
     ttgtctagga tctgcctata gggtgctttg tgacatttcc ctgcaatgat cacccaggtg      6060
     atatgccatt tgtctaggct ctgcctacag ggacattacg atgtatctct gaactgatca      6120
     cctagatcac gtattttttt ctaggttctg cctacagtgg cactgtggca tatctctgca      6180
     gtgatcaccc aggtgatgta actcttgtct agaatctgac tacatggtgc tttgtgacat      6240
     atccctgcaa tgttcaccaa ggtgttgtac cacttgtcaa agctctgcct gctggagcac      6300
     tgcgacgtat ctctacacta atcacctagg tcatgtaatt cttttctagg atcttccaac      6360
     agtggcattg tgacatatct ctgcactgat cacccaggtg atgtaacact tgtctaggat      6420
     ctgtctaaaa agactttgtg acataacttt gcgctgatcc cccaggtgaa gggacttttg      6480
     tctatgctct gctacggtgg cattgtgaca tatctctaca ctgatcaccc aggtgttgta      6540
     actcttgtgt tggatctgcc tactgggcat tgcgacatat tgctgcactg atcaccaagg      6600
     tgatgtgact cttgtcttgt ctaggctcgg tgtatggggg atttgtgact tatctctgca      6660
     ctgattaccc aggtgatgta acgcttgact aggctctgcc tactgggaca cagagacaga      6720
     tcattgcatt gatcatcaag ctgatttgtc tgttgtccag gatctgtcta cagggggcct      6780
     tgtgacgtat ctctgcactg atcatctagg tgctgtatct cttgcttacg ttctttttgc      6840
     aggggctttg tgaaatatct ctgtattgat caaccaggtg atgtaactct tgtctaggct      6900
     ctgcctacag ggggcattgt ggaataactc tgcactgatc acccaggtga tgtaactcat      6960
     ctgagctctg cctacagggg ccttgtgaca tatcactgca ctaatcaccc cggggagaga      7020
     attcctctct aggctctact tacagggggc tttgtgacct gtctctgcaa tgatcaccca      7080
     gtgatgtaac acttgtctag gatctgcgtt aagggacttt gagacataac tctgcactga      7140
     tcatccaggt gttggggctt ttatctaggc tctgcctaca ggggcattgt gacgtatttc      7200
     tgcactgaac acccaggtga cggactcttg tcttgcatat gcctatttgg gatttctggc      7260
     atatctctgc actgatcacc caggtaatga aactgtgcta taagctctgc ctacagggga      7320
     attttgagag atctctccac tgttcaccca agtgacgtaa ctattttcta ggctttgcct      7380
     acagggggtt tgtgacatat ctttgcactg atcacccagt gatgtaactc ctctaagctc      7440
     ttccttcagg ggccttgtga catttctctg ccatgcttac cctggggaga gaattcttgt      7500
     ctacgctctg cctacagggg tctctgtgac atatcactgc actgatcttg aaggtgatgt      7560
     aacagtttta taagctctgc ctacagagtg tatagtgaaa tatatctgca ctgatcacct      7620
     aggtgatgta actcttgtct accctctgcc tgcagggggc attgtgaaat atctctgcac      7680
     tgatcaacta ggtgacgtaa cccttctcta gtctctgcct acaggggcgt tttgacatat      7740
     ctctgaactg gtgacaaagg tgatgtaact cttgcctagg ctttgcctgc aggagacatt      7800
     gtgacatatc tctgcactga tcacacaggt gatgtaactc ttgtctagtc tttgcctaca      7860
     gagggcgttg tggcatatct ctgtactgat ctctcaggcg aggtaactct tgtctagtct      7920
     ctgcctacag agggcattgt gacatcactc tgcaatgatc acccaggtga tgtaactctt      7980
     gtctaggctc tgcctaccgg ggcattttaa catatcactg cactgatcac tgagatgatg      8040
     taactcttgt atatgcttcg ctgacagggg gcattgagac atatctctct gttgatcacc      8100
     gaggtgatgc tagtcttgtc taggatctgc ctgtagaggg cattgtgaaa tatctctgac      8160
     ctgatcatcc aggtgatgta attctggtct aggctctgcc tactggagac actgtgactt      8220
     atctctgcac tgatcacaca ggtgatgtaa ctcttgtcta gtctttgcct acagagggcg      8280
     ttgtggcata tctctgcact gatctctcag gtgaggtaac tcttgtctag tctctgcctg      8340
     cagagtgagt tgtgacatca ctctgcaatg atcacccagg tgacgtaact cttgcctagg      8400
     ctctgcctac atggatattg tgacatgtct gttcactgat cacccaggtg atgtaaattt      8460
     tgtctagtct ctgcccacat gaggattttg atatatccct gcactgatca ccgagatgat      8520
     gtaactcttt tctgggcttt tctgacagga ggcattgaga catatctctg cactgatcac      8580
     tgaggtgatg caactcttgt gtgggctcag cctacagggg gcattgtgac atacctcggc      8640
     cctgatcacc caggtgatgt aactcttgtc taggctcagc ctaaaggtgg tattgtgaca      8700
     tatctctgca ctgataaccc aggtgatgca attcttctct aggatctgcc tacaggggca      8760
     ttgtgacata tctctgcact gatcacaaag gtgatgtaac tcttctttag gctctgcctg      8820
     caaggtgctt tgtgaaatca atctgtattg ataatccagg tgatgtaaca tttgtctagg      8880
     ctctgcctaa gggggcactg tgacacatct ctgcactgat cactgaagtg atgtgacccc      8940
     tgtctaagtt ccccctatgg gtgcattgtg agatatctca tcactgattc cccaaattat      9000
     gtaacccttt tctagggttt gcctaaaggg ggatttgcca catatgtctg tactgatcac      9060
     ccaggtggtg taaccctttt ctggggtctg cctacaggga agttgtgaca tatcactgca      9120
     ctgatcaccc aggtgatgta acttttctct gggctgtact ttcatgggtc tttgtgacat      9180
     atctctgcac tgaccaacta ggtgatgtaa ctcttttcta ggcttttccc ggaggaggca      9240
     ttattacata tctctacaat gatcactgag gtagtgcaac tcttgtctac gctatgccta      9300
     caagggcatt gtgacatatc cctacactca taacacaggt gatgtcactc ttgtctaagc      9360
     tctgccaacc ggggtcttag tgacataact ctgcactgat cactcagatg atggtactct      9420
     tctcaatact ctgactagag gaggatttgt gacatatccc tgcactgatc acccaggtga      9480
     tcgaagtctt gtctaggctc tgtctaaggg ggcattgtgt caaatatctg cactgatcac      9540
     ccaggtgatg taactctttt ctaggctctg tctacaggga tttttgtgat atatcactgc      9600
     actgatgacc tcgatgacgt aactcttgtc taggctctgc ctacaagggc attttgactt      9660
     atcactgcgc tgatcaccca ggtgatgtaa cagttgtcta ggctctgcct atagggggca      9720
     ttgtgacata tctctacact gatcatccag gtgatttaac ttttgtctag gctttgactg      9780
     cagtagtttt tgacatatct ctgcactgat cactgacgag atggaacact tgtctaggct      9840
     ctgcctaaat gggcattgtg acacatctct gaactgatca accaagtgat gtaacacttg      9900
     tctaggctct gcctacaggg ctttgtgaca tatctctgta ctgatcaccc aggtaatggg      9960
     acttgtgtct aggttctgcc aacgggggca ttgtgacata tctgtaaact gatcacccag     10020
     gtgatgtaac ccttgtgttg gatttgccta tggtggcatt gcgacatatt tctgcactga     10080
     tcaccaaggt gatgggacta ttttctaggc tctgcctgtg ggggctttgt gacttatccc     10140
     tgcactgatc acccaggtga tgtaacactt gactaggctc tgcctactgg ggcatagtga     10200
     catatcactg cattgatcac tcagatgttg taactattgt ctaggctctg cttaaagggg     10260
     tcttgtcaca tatctctgca ctgatcaccc aggtgatgaa acacttgtct aggctctgcc     10320
     tacacgggca ttgtg                                                      10335
//


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